|
| Status |
Public on Sep 27, 2018 |
| Title |
Genome wide 6mA modification change upon mitochondial stress in C.elegans |
| Organism |
Caenorhabditis elegans |
| Experiment type |
Methylation profiling by high throughput sequencing
|
| Summary |
We discovered 364 peaks enrichment change in wild-type C.elegans genome by 6mA MeDIP-seq, which indicated those genes response to mitochondrial stress and may function in mitochondrial stress response.
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| |
|
| Overall design |
Wild-type worms was treated by mitochondrial inhibitor antimycin A from L1 to L4, then performed to 6mA MeDIP and NGS.
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| |
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| Contributor(s) |
Ma C, Ding W, Huang T |
| Citation(s) |
30510156 |
| |
| Submission date |
Aug 07, 2018 |
| Last update date |
Dec 27, 2018 |
| Contact name |
huang tianxiao |
| E-mail(s) |
tianxiaohuang123@163.com
|
| Phone |
15086817839
|
| Organization name |
peking university
|
| Street address |
yiheyuan
|
| City |
beijing |
| ZIP/Postal code |
100871 |
| Country |
China |
| |
|
| Platforms (1) |
| GPL25147 |
HiSeq X Ten (Caenorhabditis elegans) |
|
| Samples (4)
|
| GSM3324002 |
wild-type 1.93uM antimycin treated(6mA modification) |
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| This SubSeries is part of SuperSeries: |
| GSE118269 |
Genome wide DNA 6mA methylome and transcriptome change upon mitochondrial stress in C.elegans |
|
| Relations |
| BioProject |
PRJNA484980 |
| SRA |
SRP156593 |
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