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Series GSE118190 Query DataSets for GSE118190
Status Public on Dec 04, 2018
Title Transcriptional response to PORCN inhibition using an in vitro model of RNF43 mutant pancreatic adenocarcinoma (HPAF-II)
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary SRP136961 - PRJNA448457 - RNA-seq of response to PORCN inhibition, using ETC-159, in vitro of RNF43 mutant pancreatic adenocarcinoma (HPAF-II).
Overall design Drug response in an in vitro model of RNF43 mutant PDAC (HPAF-II) following 24 h and 48 h of treatment.
Contributor(s) Harmston N, Madam B, Petretto E, Virshup DM
Citation(s) 30300142, 33092630
BioProject PRJNA448457
Submission date Aug 06, 2018
Last update date Oct 27, 2020
Organization name Cardiff University
Street address Museum Avenue
City Cardiff
ZIP/Postal code CF10 3AX
Country United Kingdom
Platforms (1)
GPL21290 Illumina HiSeq 3000 (Homo sapiens)
Samples (12)
GSM3320425 24h ETC-159 Replicate 1
GSM3320426 24h ETC-159 Replicate 2
GSM3320427 24h ETC-159 Replicate 3
SRA SRP136961

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE118190_ATAC_counts.txt.gz 124.4 Mb (ftp)(http) TXT
GSE118190_RAW.tar 16.4 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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