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Series GSE118190 Query DataSets for GSE118190
Status Public on Dec 04, 2018
Title Transcriptional response to PORCN inhibition using an in vitro model of RNF43 mutant pancreatic adenocarcinoma (HPAF-II)
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary SRP136961 - PRJNA448457 - RNA-seq of response to PORCN inhibition, using ETC-159, in vitro of RNF43 mutant pancreatic adenocarcinoma (HPAF-II).
 
Overall design Drug response in an in vitro model of RNF43 mutant PDAC (HPAF-II) following 24 h and 48 h of treatment.
 
Contributor(s) Harmston N, Madam B, Petretto E, Virshup DM
Citation(s) 30300142, 33092630
BioProject PRJNA448457
Submission date Aug 06, 2018
Last update date Oct 27, 2020
Contact name NATHAN HARMSTON
E-mail(s) harmstonn@cardiff.ac.uk
Organization name Cardiff University
Street address Museum Avenue
City Cardiff
ZIP/Postal code CF10 3AX
Country United Kingdom
 
Platforms (1)
GPL21290 Illumina HiSeq 3000 (Homo sapiens)
Samples (12)
GSM3320425 24h ETC-159 Replicate 1
GSM3320426 24h ETC-159 Replicate 2
GSM3320427 24h ETC-159 Replicate 3
Relations
SRA SRP136961

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE118190_ATAC_counts.txt.gz 124.4 Mb (ftp)(http) TXT
GSE118190_RAW.tar 16.4 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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