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Series GSE118056 Query DataSets for GSE118056
Status Public on Sep 01, 2018
Title scRNAseq reveals mechanisms of Merkel cell carcinoma acquired immunotherapy resistance [2]
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary PBMC and tumor specimen from a Merkel cell carcinoma tumor at time of immunotherapy resistance
 
Overall design PBMC and tumor specimen from a human patient with MCPyV associated Merkel cell carcinoma treated with T cell therapy and avelumab (anti-PD-L1), from a time point of late immunotherapy resistance; validation patient
 
Contributor(s) Paulson K, Chapuis A
Citation(s) 30250229
NIH grant(s)
Grant ID Grant title Affiliation Name
T32 CA009515 TRAINING IN CANCER BIOLOGY AND TRANSPLANTATION UNIVERSITY OF WASHINGTON NANCY ELLEN DAVIDSON
K08 CA169485 Targeting Leukemia with Memory CD8+ T cells Transduced to Express High-Affinity W FRED HUTCHINSON CANCER RESEARCH CENTER Aude Chapuis
K24 CA139052 Pathogenetic and prognostic studies for improved therapy of Merkel cell carcinoma UNIVERSITY OF WASHINGTON PAUL NGHIEM
R01 CA176841 Viral oncoprotein targeted immune therapy for Merkel cell carcinoma UNIVERSITY OF WASHINGTON PAUL NGHIEM
P30 CA015704 Cancer Center Support Grant FRED HUTCHINSON CANCER RESEARCH CENTER D GARY GILLILAND
Submission date Aug 02, 2018
Last update date Nov 05, 2018
Contact name Kelly Garneski Paulson
Organization name Fred Hutchinson Cancer Research Center
Lab Chapuis Lab, Thomas D3-235
Street address 1100 Fairview Ave N
City Seattle
State/province WA
ZIP/Postal code 98109
Country USA
 
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (4)
GSM3317833 PBMC Relapse - L001
GSM3317834 PBMC Relapse - L002
GSM3317835 Tumor Relapse - L001
Relations
BioProject PRJNA484204
SRA SRP157915

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SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE118056_raw.expMatrix.csv.gz 29.5 Mb (ftp)(http) CSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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