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Series GSE118041 Query DataSets for GSE118041
Status Public on Dec 04, 2018
Title Transcriptional response to PORCN inhibition using an orthotopic model of RNF43 mutant pancreatic adenocarcinoma (HPAF-II)
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Timecourse RNA-seq of response to PORCN inhibition, using ETC-159, in an orthotopic model of RNF43 mutant pancreatic adenocarcinoma (HPAF-II).
Overall design Timecourse to investigate drug response in an orthotopic model of RNF43 mutant PDAC. RNA-seq performed at multiple timepoints (0 hrs, 3 hrs, 8 hrs, 16 hrs, 32 hrs, 56 hrs and 7 days)
Contributor(s) Harmston N, Madam B, Petretto E, Virshup DM
Citation(s) 30300142, 33092630
BioProject PRJNA448521
Submission date Aug 02, 2018
Last update date Oct 27, 2020
Organization name Cardiff University
Street address Museum Avenue
City Cardiff
ZIP/Postal code CF10 3AX
Country United Kingdom
Platforms (1)
GPL21290 Illumina HiSeq 3000 (Homo sapiens)
Samples (43)
GSM3317647 0h Replicate 1
GSM3317648 0h Replicate 2
GSM3317649 0h Replicate 3
SRA SRP136994

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE118041_RAW.tar 59.2 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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