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Series GSE117395 Query DataSets for GSE117395
Status Public on Apr 30, 2019
Title Hominid-specific transposable elements and KRAB-ZFPs facilitate human embryonic genome activation and transcription in naïve hESCs
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 31006620
Submission date Apr 29, 2019
Last update date Jan 05, 2021
Contact name Julien Duc
E-mail(s) julien.duc@epfl.ch
Organization name EPFL
Department School of Life Science
Lab LVG
Street address Station 19 CH-1015 Lausanne
City Lausanne
State/province VAUD
ZIP/Postal code 1015
Country Switzerland
 
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (79)
GSM3738296 RNA-seq_naive_hESC+dCAS9-KRAB_without_sgLTR7YB_rep1
GSM3738297 RNA-seq_naive_hESC+dCAS9-KRAB_without_sgLTR7YB_rep2
GSM3738298 RNA-seq_naive_hESC+dCAS9-KRAB_sgLTR7YB_A_rep1
This SuperSeries is composed of the following SubSeries:
GSE130416 Hominid-specific transposable elements and KRAB-ZFPs facilitate human embryonic genome activation and transcription in naïve hESCs [RNA-seq]
GSE130417 Hominid-specific transposable elements and KRAB-ZFPs facilitate human embryonic genome activation and transcription in naïve hESCs [ChIP-seq]
GSE130418 Hominid-specific transposable elements and KRAB-ZFPs facilitate human embryonic genome activation and transcription in naïve hESCs [ATAC-seq]
Relations
BioProject PRJNA540247

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE117395_RAW.tar 99.8 Mb (http)(custom) TAR (of BED, TAB)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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