NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE117387 Query DataSets for GSE117387
Status Public on May 17, 2019
Title Somatic loss of WWOX is associated with TP53 perturbation in basal-like breast cancer
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Inactivation of WW domain-containing oxidoreductase (WWOX), the gene product of the common fragile site FRA16D, is a common event in breast cancer and is associated with worse prognosis of triple-negative breast cancer (TNBC) and basal-like breast cancer (BLBC). Despite recent progress, the role of WWOX in driving breast carcinogenesis remains unknown. Here we report that ablation of Wwox in mammary tumor-susceptible mice results in increased tumorigenesis, and that the resultant tumors resemble human BLBC. Interestingly, copy number loss of Trp53 and downregulation of its transcript levels were observed in the Wwox knockout tumors. Moreover, tumors isolated from Wwox and Trp53 mutant mice were indistinguishable histologically and transcriptionally. Finally, we find that deletion of TP53 and WWOX co-occurred and is associated with poor survival of breast cancer patients. Altogether, our data uncover an essential role for WWOX as a bona fide breast cancer tumor suppressor through the maintenance of p53 stability.
 
Overall design mRNA profiling of mammary epithelial cells isolated from normal WT and normal Wwox KO vs Wwox KO tumors
 
Contributor(s) Abdeen SK, Aqeilan RI
Citation(s) 30082886
Submission date Jul 19, 2018
Last update date May 17, 2019
Contact name Suhaib Khaled Abdeen
E-mail(s) suhibabdin@gmail.com
Organization name Hebrew Univeristy
Department Immunology and cancer research
Lab Rami Aqeilan
Street address Ein kerem
City Jerusalem
ZIP/Postal code 9112101
Country Israel
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (16)
GSM3293677 WT_N_1 (5698)
GSM3293678 WT_N_2 (5699)
GSM3293679 WT_N_3 (5711)
Relations
BioProject PRJNA481978
SRA SRP154465

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE117387_DESeq2_final_14-7-2018.xls.gz 81.8 Mb (ftp)(http) XLS
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap