GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Series GSE116916 Query DataSets for GSE116916
Status Public on Oct 01, 2018
Title RNAseq quantitative analysis of naïve wild type and interleukin-6 knockout mice
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary The purpose of this study was to investigate general trasncriptomic changes in wild type and interleukin-6 knockout mice
Overall design Retinal mRNA profiles of naive mice were generated by 100 bp paired-end sequencing according to the manufacturer’s protocol (Illumina NovaSeq6000).
Contributor(s) Sappington RM, Wareham LK
Citation(s) 34646984
Submission date Jul 11, 2018
Last update date Oct 19, 2021
Contact name Lauren Katie Wareham
Phone 8575408019
Organization name Vanderbilt University Medical Center
Department Vanderbilt Eye Institute
Lab Sappington Lab
Street address 2213 Garland Avenue, MRBIV 11435a
City Nashville
State/province Tennessee
ZIP/Postal code 37232
Country USA
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (10)
GSM3263645 983-LW-4
GSM3263646 983-LW-5
GSM3263647 983-LW-6
BioProject PRJNA480595
SRA SRP153030

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE116916_Processed_data_Wareham2.txt.gz 1.8 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap