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Series GSE115060 Query DataSets for GSE115060
Status Public on May 18, 2024
Title Identification of functional genetic variants in transformed Ba/F3 cells expressing U2AF35(S34F)
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Exome and transcriptome sequencing analysis of murine transformed cells identifies loss of potential tumor suppressor
 
Overall design Genomic and transcriptomic profiles of parental (U2AF35-WT) and transformed Ba/F3 cell lines (U2AF35-S34F) were generated by deep sequencing.
 
Contributor(s) Park SM, Liu H, Zhu J, Green MR
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Submission date May 29, 2018
Last update date May 18, 2024
Contact name Jennifer Benanti
E-mail(s) Jennifer.Benanti@umassmed.edu
Phone 5088561773
Organization name UMass Medical School
Department Molecular, Cell & Cancer Biology
Street address 364 Plantation St. LRB525
City Worcester
State/province MA
ZIP/Postal code 01605
Country USA
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (8)
GSM3164304 Parental_1
GSM3164305 Parental_2
GSM3164306 Parental_3
Relations
BioProject PRJNA473584
SRA SRP149287

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE115060_formated.Sungmi.Mar18.RNAseq.count.table.txt.gz 547.5 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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