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Series GSE112561 Query DataSets for GSE112561
Status Public on Oct 18, 2018
Title Genomic classification and identification of the cell of origin of pediatric mixed phenotype acute leukemia
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
Overall design Refer to individual Series
Citation(s) 30209392
Submission date Mar 30, 2018
Last update date Mar 19, 2019
Contact name Beisi Xu
Organization name St Jude Children's Research Hosipital
Department Center for Applied Bioinformatics
Street address 262 Danny Thomas Pl
City Memphis
State/province Tennessee
ZIP/Postal code 38105
Country USA
Platforms (2)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (18)
GSM3073005 RNA_C30-ZNF384WT-CHA replicate 2
GSM3073006 RNA_C31-ZNF384WT-CHA replicate 1
GSM3073007 RNA_C21-EV replicate 1
This SuperSeries is composed of the following SubSeries:
GSE112558 RNA-sequencing to investigate transcriptional changes caused by ZNF384 fusion proteins in murine pre-B cells
GSE112560 ChIP-sequencing to investigate occupancy of wild-type and fusion ZNF384 proteins in murine pre-B cells
BioProject PRJNA448174

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE112561_RAW.tar 3.8 Gb (http)(custom) TAR (of BW)
SRA Run SelectorHelp

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