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Series GSE111298 Query DataSets for GSE111298
Status Public on Mar 02, 2018
Title aCGH data from SCEC and corresponding normal samples
Organism Homo sapiens
Experiment type Genome variation profiling by genome tiling array
Summary Primary SCEC is a rare malignancy without established treatment strategy. Although previous studies suggested that there were similarities between SCEC and SCLC in clinical manifestation and pathological morphology, genetic studies on this highly malignant tumour remains sparse.
This study was designed to investigate the copy number variations (CNVs) of SCEC.
Overall design SCEC vs.corresponding normal samples. Biological replicates: 3 SCEC replicates, 3 control replicates.
Contributor(s) Liu D, Chen J, Fan M
Citation(s) 30228821
Submission date Mar 01, 2018
Last update date Jul 19, 2019
Contact name Juan Wang
Organization name Shanghai Jiayin Biotechnology Co., Ltd.
Street address No. 135 Guowei Road
City Shanghai
ZIP/Postal code 200438
Country China
Platforms (1)
GPL10123 Agilent-022060 SurePrint G3 Human CGH Microarray 4x180K (Feature Number version)
Samples (3)
GSM3028082 SCEC and corresponding normal tissue, replicate 1
GSM3028083 SCEC and corresponding normal tissue, replicate 2
GSM3028084 SCEC and corresponding normal tissue, replicate 3
This SubSeries is part of SuperSeries:
GSE111299 Genome-wide analysis of gene expression and DNA copy number variations in small cell esophageal carcinoma
BioProject PRJNA436496

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE111298_RAW.tar 55.9 Mb (http)(custom) TAR (of TXT)
GSE111298_cytogenomics_matrix.txt.gz 2.0 Kb (ftp)(http) TXT
Processed data are available on Series record

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