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Series GSE111070 Query DataSets for GSE111070
Status Public on Feb 23, 2018
Title Single cell transcriptomic analysis (10x Genomics) of mouse splenic CD4+ T cells
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Single cell transcriptomic analysis (10x Genomics) of mouse splenic CD4+ T cells
Overall design Single cells were sorted by flow cytometry for single cell RNAseq library preparation (10x Genomics)
Contributor(s) Kiner E, Benoist C
Citation(s) 29434354
Submission date Feb 23, 2018
Last update date Mar 25, 2019
Contact name CBDM Lab
Phone 617-432-7747
Organization name Harvard Medical School
Department Microbiology and Immunobiology
Street address 77 Avenue Louis Pasteur
City Boston
State/province MA
ZIP/Postal code 02215
Country USA
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (1)
GSM3021577 Spleen CD4+ T cells_single_cells_10X
This SubSeries is part of SuperSeries:
GSE109742 Single cell transcriptomic analysis of mouse FoxP3- CD4+ Tconv cells and FoxP3+ regulatory CD4+ T cells isolated from secondary lymphoid organs, colon, muscle, visceral adipose tissue
BioProject PRJNA435745
SRA SRP133395

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE111070_10XGenomics_MouseSpleenCD4_metadata.txt.gz 17.6 Kb (ftp)(http) TXT
GSE111070_RAW.tar 2.2 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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