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Series GSE110834 Query DataSets for GSE110834
Status Public on Oct 19, 2021
Title Sequencing of Caenorhabditis elegans at 5 different time point after Rotenone and DMSO treatment (mRNA)
Organism Caenorhabditis elegans
Experiment type Expression profiling by high throughput sequencing
Summary Comparison of gene expression profiles from C. elegans at different time points after Rotenone and Dimethylsulfoxid (DMSO) treatment. The RNA-seq data comprise 5 time points (6 hours, 1, 2, 3 and 5 days) treated with Rotenone and DMSO as well as 2 time points (3 and 5 days) with an additional H2O treatment.

Jena Centre for Systems Biology of Ageing - JenAge (www.jenage.de)

 
Overall design 36 samples in 12 groups: 6 hours DMSO (3 Samples), 6 hours Rotenone (3 Samples), 1 day DMSO (3 Samples), 1 day H2O (3 Samples), 1 day Rotenone (3 Samples), 2 day DMSO (3 Samples), 2 day Rotenone (3 Samples), 3 days DMSO (3 Samples), 3 days Rotenone (3 Samples), 5 days DMSO (3 Samples), 5 days H2O (3 Samples), 5 days Rotenone (3 Samples)
 
Contributor(s) Ristow M, Zarse K, Hühne R, Groth M, Platzer M
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Submission date Feb 20, 2018
Last update date Oct 19, 2021
Contact name JenAge Project
E-mail(s) geo-data@jenage.de
Organization name Leibniz Institute for Age Research - Fritz Lipmann Institute
Street address Beutenbergstr. 11
City Jena
ZIP/Postal code D-07745
Country Germany
 
Platforms (1)
GPL18245 Illumina HiSeq 2500 (Caenorhabditis elegans)
Samples (36)
GSM3017534 NU_FSU_M1_all_RNAseq
GSM3017535 NU_FSU_M2_all_RNAseq
GSM3017536 NU_FSU_M3_all_RNAseq
Relations
BioProject PRJNA434691
SRA SRP133116

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE110834_sample_counts.xls.gz 6.1 Mb (ftp)(http) XLS
GSE110834_sample_rpkms.xls.gz 7.3 Mb (ftp)(http) XLS
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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