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Status |
Public on Jul 22, 2019 |
Title |
Spatiotemporal pattern of the transcriptional regulatory landscape of the mouse ventricle after myocardial infarction |
Organism |
Mus musculus |
Experiment type |
Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing
|
Summary |
Stress-response gene activity replaces cardiomyocyte lineage-specific program in a transcriptionally discrete infarct border zone
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Overall design |
RNA-seq & ATAC-seq on left ventricular remote and border zone tissues at 3, 7 and 14 days after myocardial infarction
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Contributor(s) |
van Duijvenboden K, Janssen R, Christoffels VM |
Citation(s) |
31259610 |
|
Submission date |
Feb 06, 2018 |
Last update date |
Jul 24, 2019 |
Contact name |
Vincent M. Christoffels |
E-mail(s) |
v.m.christoffels@amsterdamumc.nl
|
Phone |
0205667821
|
Organization name |
Amsterdam UMC
|
Department |
Medical Biology
|
Lab |
Vincent Christoffels
|
Street address |
Meibergdreef 15 K2-159
|
City |
Amsterdam |
State/province |
N/A (NA) |
ZIP/Postal code |
1105 AZ |
Country |
Netherlands |
|
|
Platforms (2) |
GPL17021 |
Illumina HiSeq 2500 (Mus musculus) |
GPL19057 |
Illumina NextSeq 500 (Mus musculus) |
|
Samples (36)
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Relations |
BioProject |
PRJNA433175 |
SRA |
SRP132283 |