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Series GSE110175 Query DataSets for GSE110175
Status Public on Apr 25, 2019
Title Genome-wide maps of IRF2 targets
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Using ChIP-seq technology, we tried to find out the whole genome targets for IRF2 in mouse colorectal cancer (CRC) cells. More than 7000 genes were defined as the target of IRF2.
 
Overall design Examine IRF2 binding peaks in primarily cultured iKAP CRC cells as compared with input.
 
Contributor(s) Liao W, Lan ZD, Tang M
Citation(s) 30905761
Submission date Feb 05, 2018
Last update date Apr 25, 2019
Contact name Wenting Liao
E-mail(s) Wliao2@mdanderson.org
Organization name md anderson
Street address 1881 east road
City houston
ZIP/Postal code 77051
Country USA
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (2)
GSM2981757 LAN-6-input-3496_S45
GSM2981758 LAN-6-IRF2-3496plusDOX_S39
Relations
BioProject PRJNA433012
SRA SRP132225

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE110175_RAW.tar 684.6 Mb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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