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Series GSE109774 Query DataSets for GSE109774
Status Public on Mar 19, 2018
Title Tabula Muris: Transcriptomic characterization of 20 organs and tissues from Mus musculus at single cell resolution
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We have created a resource of single cell transcriptome data from the model organism Mus musculus.

Contributor: The Tabula Muris Consortium

The full list of contributors to this dataset can be found in the corresponding publication.
Overall design Single cell RNA sequencing of single cells across 20 tissues of 3 month aged mice
Citation(s) 30283141
Submission date Jan 29, 2018
Last update date Jun 04, 2019
Contact name Angela Oliveira Pisco
Organization name CZ Biohub
Department Data Sciences
Street address 499 Illinois St
City San Francisco
State/province CA
ZIP/Postal code 94103
Country USA
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (46)
GSM2967045 Bladder
GSM2967046 Brain_Microglia
GSM2967047 Brain_Neurons
This SubSeries is part of SuperSeries:
GSE132042 Tabula Muris
BioProject PRJNA432002
SRA SRP131661

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE109774_Bladder.tar.gz 114.9 Mb (ftp)(http) TAR
GSE109774_Brain_Microglia.tar.gz 315.3 Mb (ftp)(http) TAR
GSE109774_Brain_Neurons.tar.gz 382.0 Mb (ftp)(http) TAR
GSE109774_Colon.tar.gz 288.8 Mb (ftp)(http) TAR
GSE109774_Fat.tar.gz 395.2 Mb (ftp)(http) TAR
GSE109774_Heart.tar.gz 468.4 Mb (ftp)(http) TAR
GSE109774_Kidney.tar.gz 55.2 Mb (ftp)(http) TAR
GSE109774_Liver.tar.gz 65.7 Mb (ftp)(http) TAR
GSE109774_Lung.tar.gz 128.3 Mb (ftp)(http) TAR
GSE109774_Mammary.tar.gz 183.4 Mb (ftp)(http) TAR
GSE109774_Marrow.tar.gz 364.7 Mb (ftp)(http) TAR
GSE109774_Muscle.tar.gz 139.6 Mb (ftp)(http) TAR
GSE109774_Pancreas.tar.gz 135.1 Mb (ftp)(http) TAR
GSE109774_RAW.tar 374.5 Mb (http)(custom) TAR (of TAR)
GSE109774_Skin.tar.gz 169.2 Mb (ftp)(http) TAR
GSE109774_Spleen.tar.gz 112.8 Mb (ftp)(http) TAR
GSE109774_Thymus.tar.gz 103.5 Mb (ftp)(http) TAR
GSE109774_Tongue.tar.gz 102.4 Mb (ftp)(http) TAR
GSE109774_Trachea.tar.gz 95.9 Mb (ftp)(http) TAR
GSE109774_list_of_SRR_accessions_and_raw_filenames.txt.gz 774.0 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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