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Series GSE108695 Query DataSets for GSE108695
Status Public on Dec 27, 2020
Title TET1 regulates reprogramming with Vitamin C and relatively small molecules
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We found a small molecule-DKG, relative to Vitamin C, could replace the function of Viamin C during reprogramming. After comparing transcriptome profiling (RNA-seq) of this molecule to vitamin C, it could provide a framework for more mechanism.
Overall design mRNA profiles of day 3 and day8 during reprogramming with DMSO or Vitamin C or DKG infected Flag or Tet1CD virus.
Contributor(s) Zhang Y, Hui Z
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Submission date Jan 03, 2018
Last update date Dec 29, 2020
Contact name zheng hui
Organization name GIBH
Street address Kaiyuan av.190
City Guangzhou
ZIP/Postal code 510000
Country China
Platforms (1)
GPL16417 Illumina MiSeq (Mus musculus)
Samples (31)
GSM2911306 0824 OG2MEF
GSM2911307 0824 Ips D3 Flag DMSO
GSM2911308 0824 Ips D3 Flag Vc
BioProject PRJNA428314
SRA SRP127954

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE108695_RAW.tar 21.9 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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