GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Series GSE108553 Query DataSets for GSE108553
Status Public on Dec 27, 2018
Title Genome-wide transcriptional profiles of Kupffer cells and alveolar macrophages from naïve and LPS-injected mice
Organism Mus musculus
Experiment type Expression profiling by array
Expression profiling by high throughput sequencing
Summary To reveal early responses to one of septic agents, lipopolysaccharide (LPS), in tissue resident macrophages, we isolated Kupffer cells as well as alveolar macrophages from bolus LPS-injected mice at 1 and 4 hours (hr) of early time points and performed quantitative RNA sequencing
Overall design mRNA profiles of Kupffer cells and alveolar macrophages from naïve and LPS-injected mice were generated by sequencing, in triplicate, using NextSeq 500 (Illumina, Inc., USA)
Contributor(s) Na Y, Jung D
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Dec 27, 2017
Last update date Jun 11, 2019
Contact name Daun Jung
Phone +82)10-9498-2801
Organization name CHA Bundang Medical Center
Department Department of Pathology
Street address Bundang-gu, 삼평동 689
City Seongnam-si
State/province Gyeonggi-do
ZIP/Postal code 13488
Country South Korea
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (18)
GSM2904922 Kupffer cell naïve-1
GSM2904923 Kupffer cell naïve-2
GSM2904924 Kupffer cell naïve-3
BioProject PRJNA427665
SRA SRP127608

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE108553_RAW.tar 1.9 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap