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Series GSE107956 Query DataSets for GSE107956
Status Public on Aug 17, 2018
Title Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type and YTHDF2 KD human umbilical cord blood CD34+ cell Transcriptomes
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary RNA-seq analysis were performed with total RNA extracted from wt and YTHDF2 KD human UCB CD34+ cells.
 
Overall design Three replicates of wt and three of YTHDF2 knockdown RNA-seq
 
Contributor(s) Li Z, Gogol MM
Citation(s) 30065315
Submission date Dec 12, 2017
Last update date May 15, 2019
Contact name Madelaine Gogol
Organization name Stowers Institute
Department Computational Biology Core
Street address 1000 E. 50th Street
City Kansas City
State/province MO
ZIP/Postal code 64110
Country USA
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (6)
GSM2884212 human UCB CD34+ wild type 1
GSM2884213 human UCB CD34+ wild type 2
GSM2884214 human UCB CD34+ wild type 3
This SubSeries is part of SuperSeries:
GSE107957 Hematopoietic stem cell expansion through suppression of YTHDF2-mediated m6A-marked mRNA decay
Relations
BioProject PRJNA422166
SRA SRP126652

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE107956_norm_counts.txt.gz 665.6 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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