|
Status |
Public on Dec 01, 2018 |
Title |
Mutant IDH1 promotes glioma formation in vivo [Bisulfite-seq] |
Organism |
Mus musculus |
Experiment type |
Methylation profiling by high throughput sequencing
|
Summary |
Genomic DNA from IDH1 mutant and WT tumors were used to detect genome wide methylation using Agilent SureSelect XT Mouse Methyl-Seq Enrichment System capture kit following manufacturer’s recommendations.
|
|
|
Overall design |
Whole genome methylation analysis on IDH mutant and WT cell lines
|
|
|
Contributor(s) |
Philip B, Silvis MR, Yu DX, Shin CH, Robinson JP, Robinson GL, Angel SN, Welker AE, Tripp SR, Sonnen JA, VanBrocklin MW, Gibbons RJ, Looper RE, Colman H, Holmen SL |
Citation(s) |
29719265 |
|
Submission date |
Dec 01, 2017 |
Last update date |
May 15, 2019 |
Contact name |
Sheri Holmen |
E-mail(s) |
sheri.holmen@hci.utah.edu
|
Phone |
801-213-4237
|
Organization name |
University of Utah
|
Department |
Surgery
|
Street address |
2000 Circle of Hope Dr.
|
City |
Salt Lake City |
State/province |
UT |
ZIP/Postal code |
84112 |
Country |
USA |
|
|
Platforms (1) |
GPL17021 |
Illumina HiSeq 2500 (Mus musculus) |
|
Samples (8)
|
|
This SubSeries is part of SuperSeries: |
GSE107616 |
Mutant IDH1 promotes glioma formation in vivo |
|
Relations |
BioProject |
PRJNA420779 |
SRA |
SRP125979 |