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Series GSE106793 Query DataSets for GSE106793
Status Public on Mar 06, 2018
Title Temporal transcriptomic profiles of transition from hematopoietic multipotent progenitors to B committed cells [RNA-seq]
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary To identify the “time-lapse” TF networks during B lineage commitment, we established multipotent progenitors harboring a tamoxifen-inducible form of Id3, an in vitro system where virtually all cells became B cells within 6 days by simply withdrawing 4-OHT. In this study, transcriptome analysis at multiple time points was performed using the culture system.
Overall design Time-course transcriptomic profiles of multipotent iLS cells toward B committed cells were analyzed by deep sequencing, basically in triplicate, using Illumina Hiseq platform.
Contributor(s) Miyai T, Endo TA, Ikawa T
Citation(s) 29440259
Submission date Nov 13, 2017
Last update date May 15, 2019
Contact name Takaho A. Endo
Organization name RIKEN
Department IMS
Lab Laboratory for Integrative Genomics
Street address 1-7-22 Suehiro, Tsurumi
City Yokohama
State/province Kanagawa
ZIP/Postal code 230-0045
Country Japan
Platforms (1)
GPL18480 Illumina HiSeq 1500 (Mus musculus)
Samples (44)
GSM2850366 FL iLS_0h after treatment rep1
GSM2850367 FL iLS_0h after treatment rep2
GSM2850368 FL iLS_0h after treatment rep3
This SubSeries is part of SuperSeries:
GSE106795 Temporal transcriptomic and epigenomic profiles of transition from hematopoietic multipotent progenitors to B committed cells
BioProject PRJNA418087
SRA SRP124826

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE106793_fpkm_corrected.txt.gz 2.2 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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