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GEO accession:
Series GSE106517
Query DataSets for GSE106517
Status
Public on Apr 22, 2021
Title
HOTAIR lncRNA role in epithelial-mesenchymal transition
Organism
Homo sapiens
Experiment type
Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
33960111
Submission date
Nov 03, 2017
Last update date
Sep 06, 2021
Contact name
Marina Pinskaya
E-mail(s)
marina.pinskaya@curie.fr
Organization name
Institut Curie
Street address
rue d'Ulm
City
Paris
ZIP/Postal code
75
Country
France
Platforms (2)
GPL16791
Illumina HiSeq 2500 (Homo sapiens)
GPL24676
Illumina NovaSeq 6000 (Homo sapiens)
Samples (68)
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More...
GSM2833262
Input_G1
GSM2833263
Input_G2
GSM2833264
Input_H1
GSM2833265
Input_H2
GSM2833266
Input_P1
GSM2833267
Input_P2
GSM2833268
Input_L1
GSM2833269
Input_L2
GSM2833270
IP_G1
GSM2833271
IP_G2
GSM2833272
IP_H1
GSM2833273
IP_H2
GSM2833274
IP_P1
GSM2833275
IP_P2
GSM2833276
IP_L1
GSM2833277
IP_L2
GSM2839698
CTR1
GSM2839699
CTR2
GSM2839700
Epi-HOT1
GSM2839701
Epi-HOT2
GSM2839702
Epi-HOTΔP1
GSM2839703
Epi-HOTΔP2
GSM2839704
Epi-HOTΔL1
GSM2839705
Epi-HOTΔL2
GSM2839706
E1-tot
GSM2839707
E2-tot
GSM2839708
M1-tot
GSM2839709
M2-tot
GSM4968657
HA5-Early_IgG_G1_CUT&RUN
GSM4968658
HA5-Early_IgG_G2_CUT&RUN
GSM4968659
HA5-Early_IgG_H1_CUT&RUN
GSM4968660
HA5-Early_IgG_H2_CUT&RUN
GSM4968661
HA5-Early_IgG_P1_CUT&RUN
GSM4968662
HA5-Early_IgG_P2_CUT&RUN
GSM4968663
HA5-Early_IgG_L1_CUT&RUN
GSM4968664
HA5-Early_IgG_L2_CUT&RUN
GSM4968665
HA5-Early_H3K4me2_G1_CUT&RUN
GSM4968666
HA5-Early_H3K4me2_G2_CUT&RUN
GSM4968667
HA5-Early_H3K4me2_H1_CUT&RUN
GSM4968668
HA5-Early_H3K4me2_H2_CUT&RUN
GSM4968669
HA5-Early_H3K4me2_P1_CUT&RUN
GSM4968670
HA5-Early_H3K4me2_P2_CUT&RUN
GSM4968671
HA5-Early_H3K4me2_L1_CUT&RUN
GSM4968672
HA5-Early_H3K4me2_L2_CUT&RUN
GSM4968673
HA5-Early_H3K9me2_G1_CUT&RUN
GSM4968674
HA5-Early_H3K9me2_G2_CUT&RUN
GSM4968675
HA5-Early_H3K9me2_H1_CUT&RUN
GSM4968676
HA5-Early_H3K9me2_H2_CUT&RUN
GSM4968677
HA5-Early_H3K9me2_P1_CUT&RUN
GSM4968678
HA5-Early_H3K9me2_P2_CUT&RUN
GSM4968679
HA5-Early_H3K9me2_L1_CUT&RUN
GSM4968680
HA5-Early_H3K9me2_L2_CUT&RUN
GSM4968681
HA5-Early_H3K27ac_G1_CUT&RUN
GSM4968682
HA5-Early_H3K27ac_G2_CUT&RUN
GSM4968683
HA5-Early_H3K27ac_H1_CUT&RUN
GSM4968684
HA5-Early_H3K27ac_H2_CUT&RUN
GSM4968685
HA5-Early_H3K27ac_P1_CUT&RUN
GSM4968686
HA5-Early_H3K27ac_P2_CUT&RUN
GSM4968687
HA5-Early_H3K27ac_L1_CUT&RUN
GSM4968688
HA5-Early_H3K27ac_L2_CUT&RUN
GSM4968689
HA5-Early_Lsd1_G1_CUT&RUN
GSM4968690
HA5-Early_Lsd1_G2_CUT&RUN
GSM4968691
HA5-Early_Lsd1_H1_CUT&RUN
GSM4968692
HA5-Early_Lsd1_H2_CUT&RUN
GSM4968693
HA5-Early_Lsd1_P1_CUT&RUN
GSM4968694
HA5-Early_Lsd1_P2_CUT&RUN
GSM4968695
HA5-Early_Lsd1_L1_CUT&RUN
GSM4968696
HA5-Early_Lsd1_L2_CUT&RUN
This SuperSeries is composed of the following SubSeries:
GSE106262
Role of Lsd1 in HOTAIR function
GSE106516
Identification and functional characterization of long non-coding RNAs associated with epithelial-to-mesenchymal transition
GSE162937
Profiling of Lsd1 and chromatin marks in epithelial cells overexpressing HOTAIR variants
Relations
BioProject
PRJNA417082
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE106517_RAW.tar
2.9 Mb
(http)
(custom)
TAR (of TXT)
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