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Series GSE106460 Query DataSets for GSE106460
Status Public on May 31, 2018
Title Expression data from AMPKalpha1/2-double knockout murine embryonic fibroblasts stimulated or not with AICAR
Organism Mus musculus
Experiment type Expression profiling by array
Summary AICAR is a metabolite with anti-tumoral properties. Its monophosphate derivative ZMP is an AMP mimetic activator of the protein kinases AMPK. However, AICAR also mediates AMPK-independent effects.
A kinetic transcriptome analysis was therefore carried out in Ampkα1/α2 double knockout murine embryonic fibroblasts in response to AICAR in order to unveil these AMPK-independent functions,
 
Overall design Ampkα1/α2 double knockout murine embryonic cells were incubated with 1 mM AICAR for 0, 1, 2, 4, 8, 12 and 24h. RNA extraction and hybridization on Affymetrix (Mouse MG-430 PM Array Strip Kit) were then performed. Analyses were performed in triplicates (except t=8h in duplicate). The fold change in gene expression corresponds to the ratio between each incubation times with AICAR and control (t=0) without AICAR.
 
Contributor(s) Philippe C, Pinson B, Dompierre J, Pantesco V, Viollet B, Daignan-Fornier B, Moenner M
Citation(s) 29730476
Submission date Nov 02, 2017
Last update date Aug 30, 2018
Contact name Michel Moenner
E-mail(s) michel.moenner@u-bordeaux.fr
Phone +33 688193836
Organization name CNRS
Department IBGC CNRS UMR5095
Lab Genetics of Metabolic Pathways
Street address 1, rue Camille Saint-Saens
City Bordeaux
ZIP/Postal code 33077
Country France
 
Platforms (1)
GPL11180 [HT_MG-430_PM] Affymetrix HT MG-430 PM Array Plate
Samples (20)
GSM2837814 MEFdKO_Ctrl_0h_rep1
GSM2837815 MEFdKO_Ctrl_0h_rep2
GSM2837816 MEFdKO_Ctrl_0h_rep3
Relations
BioProject PRJNA416925

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Supplementary file Size Download File type/resource
GSE106460_RAW.tar 50.9 Mb (http)(custom) TAR (of CEL, CHP)
Processed data included within Sample table
Processed data provided as supplementary file

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