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Series GSE106197 Query DataSets for GSE106197
Status Public on May 31, 2018
Title Next Generation Sequencing Facilitates Quantitative Analysis of allele specific transcription of PVT1 and MYC in mouse nueronal progenitor clonal cells
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary PVT1 and MYC transcription is inversely correlated
 
Overall design MYC and PVT1 transcripts are converted to cDNA by qRT-PCR reaction, and then targeted region was amplified and sequenced
 
Contributor(s) Cho SW, Chang HY
Citation(s) 29731168
Submission date Oct 25, 2017
Last update date May 15, 2019
Contact name Howard Y. Chang
E-mail(s) howchang@stanford.edu
Phone 650-725-7022
Organization name Stanford
Lab Chang Lab
Street address 269 Campus Drive, CCSR 2130
City Stanford
State/province CALIFORNIA
ZIP/Postal code 94305
Country USA
 
Platforms (1)
GPL16417 Illumina MiSeq (Mus musculus)
Samples (108)
GSM2831373 mNPC clone#001 technical rep 1
GSM2831374 mNPC clone#002 technical rep 1
GSM2831375 mNPC clone#003 technical rep 1
This SubSeries is part of SuperSeries:
GSE97669 Promoter of lncRNA gene *PVT1* is a tumor suppressor DNA element
Relations
BioProject PRJNA415860
SRA SRP121515

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE106197_RAW.tar 6.8 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
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