GEO Accession viewer

NCBI > GEO > Accession Display

Not logged in | Login

GEO help: Mouse over screen elements for information.

Series GSE105939

Query DataSets for GSE105939

Status

Public on Oct 24, 2017

Title

ChIP-seq from K562 (ENCSR740NPG)

Project

ENCODE

Organism

Homo sapiens

Experiment type

Genome binding/occupancy profiling by high throughput sequencing

Summary

eGFP-BACH1 ChIP-seq on human K562

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

Overall design

https://www.encodeproject.org/ENCSR740NPG/

Citation(s)

22955616

BioProject

PRJNA63443

Submission date

Oct 23, 2017

Last update date

May 15, 2019

Contact name

ENCODE DCC

E-mail(s)

encode-help@lists.stanford.edu

Organization name

ENCODE DCC

Street address

300 Pasteur Dr

City

Stanford

State/province

ZIP/Postal code

94305-5120

Country

USA

Platforms (1)

GPL16791

Illumina HiSeq 2500 (Homo sapiens)

Samples (2)

GSM2828783	ChIP-seq from K562 (ENCLB202XBO)
GSM2828784	ChIP-seq from K562 (ENCLB638KGJ)

Download family	Format
SOFT formatted family file(s)	SOFT
MINiML formatted family file(s)	MINiML
Series Matrix File(s)	TXT

Supplementary file	Size	Download	File type/resource
GSE105939_ENCFF161ERU_peaks_hg19.bigBed	12.1 Mb	(ftp)(http)	BIGBED
GSE105939_ENCFF199FBA_conservative_idr_thresholded_peaks_GRCh38.bigBed	573.9 Kb	(ftp)(http)	BIGBED
GSE105939_ENCFF229NAA_peaks_GRCh38.bigBed	12.1 Mb	(ftp)(http)	BIGBED
GSE105939_ENCFF245AYE_fold_change_over_control_GRCh38.bigWig	965.3 Mb	(ftp)(http)	BIGWIG
GSE105939_ENCFF319BCP_optimal_idr_thresholded_peaks_hg19.bed.gz	243.8 Kb	(ftp)(http)	BED
GSE105939_ENCFF365WQR_optimal_idr_thresholded_peaks_GRCh38.bed.gz	301.4 Kb	(ftp)(http)	BED
GSE105939_ENCFF443POG_peaks_GRCh38.bed.gz	6.8 Mb	(ftp)(http)	BED
GSE105939_ENCFF476YGX_conservative_idr_thresholded_peaks_hg19.bed.gz	186.2 Kb	(ftp)(http)	BED
GSE105939_ENCFF513SZH_signal_p-value_GRCh38.bigWig	791.7 Mb	(ftp)(http)	BIGWIG
GSE105939_ENCFF590IXA_optimal_idr_thresholded_peaks_GRCh38.bigBed	707.7 Kb	(ftp)(http)	BIGBED
GSE105939_ENCFF606FPF_optimal_idr_thresholded_peaks_hg19.bigBed	511.6 Kb	(ftp)(http)	BIGBED
GSE105939_ENCFF752RBV_conservative_idr_thresholded_peaks_GRCh38.bed.gz	229.3 Kb	(ftp)(http)	BED
GSE105939_ENCFF772AZG_conservative_idr_thresholded_peaks_hg19.bigBed	423.7 Kb	(ftp)(http)	BIGBED
GSE105939_ENCFF820FCA_peaks_hg19.bed.gz	6.9 Mb	(ftp)(http)	BED
GSE105939_ENCFF894ERT_signal_p-value_hg19.bigWig	796.2 Mb	(ftp)(http)	BIGWIG
GSE105939_ENCFF968KJF_fold_change_over_control_hg19.bigWig	971.5 Mb	(ftp)(http)	BIGWIG
GSE105939_RAW.tar	4.9 Gb	(http)(custom)	TAR (of BED, BIGBED, BIGWIG, TXT)
SRA Run Selector
Raw data provided as supplementary file
Processed data provided as supplementary file
Processed data are available on Series record