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Series GSE105062 Query DataSets for GSE105062
Status Public on Dec 02, 2019
Title Netrin-1 signalling function in mouse pluripotent stem cells [ChIP-Seq]
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary We describe here the consequences of the activation of the netrin-1 signalling pathway in mouse embryonic stem cells (mESC).
 
Overall design Comparison of H3K4me3 and H3K27me3 ChIP-seq profiles of WT mESC and mESC exogenously expressing netrin-1.
 
Contributor(s) Lavial F
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Submission date Oct 17, 2017
Last update date Dec 02, 2019
Contact name Fabrice Lavial
Organization name CRCL
Street address 28 rue Laennec
City Lyon
ZIP/Postal code 69008
Country France
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (12)
GSM4103899 WT_H3K27me3 ChIP-seq rep1
GSM4103900 WT_H3K27me3 ChIP-seq rep2
GSM4103901 WT_H3K27me3 ChIP-seq rep3
This SubSeries is part of SuperSeries:
GSE102831 Netrin-1 signalling function in mouse pluripotent stem cells
Relations
BioProject PRJNA414537
SRA SRP120116

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE105062_RAW.tar 1023.0 Mb (http)(custom) TAR (of BW)
GSE105062_annotatePeaks_H3K27me3_not_bivalent_WT_Netrin_size50kb_hist200.txt.gz 9.0 Kb (ftp)(http) TXT
GSE105062_annotatePeaks_H3K27me3_serum_bivalent_WT_v_Netrin_size8kb_hist10.txt.gz 27.0 Kb (ftp)(http) TXT
GSE105062_annotatePeaks_H3K4me3_not_bivalent_WT_Netrin_size8kb_hist10.txt.gz 27.9 Kb (ftp)(http) TXT
GSE105062_annotatePeaks_H3K4me3_serum_bivalent_WT_v_Netrin_size8kb_hist10.txt.gz 26.9 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record
Processed data provided as supplementary file

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