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Series GSE104854 Query DataSets for GSE104854
Status Public on Oct 13, 2017
Title Ribosome-free RNA sequencing of long noncoding RNAs and circular RNAs in lung adenocarcinoma
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Noncoding RNAs play important roles in various biological processes and diseases, including cancer. Expression profile of circular RNAs (circRNA) is largely unknown in lung adenocarcinoma. This study is designed to explore mRNA, long noncoding RNA (lncRNA), and circRNA in lung adenocarcinoma.
Overall design 9 pairs of lung adenocarcinoma tissues and paired nontumor tissues were collected. Every 3 tumor and every 3 nontumor tissues were pooled together for RNA sequencing, and 6 samples were sequenced. Primary lung adenocarcinoma tissues and paired nontumor tissues were snap frozen with liquid nitrogen immediately after resection and stored in liquid nitrogen till RNA extraction.
Contributor(s) Qiu M, Yin R, Li M, Wang J
Citation(s) 29632808
Submission date Oct 12, 2017
Last update date May 15, 2019
Contact name Mantang Qiu
Phone +862583283408
Organization name Cancer Institute of Jiangsu Province
Department Thoracic Surgery
Street address 42 Baiziting
City Nanjing
State/province Jiangsu
ZIP/Postal code 210009
Country China
Platforms (1)
GPL17303 Ion Torrent Proton (Homo sapiens)
Samples (6)
GSM2808849 LN-1
GSM2808850 LN-2
GSM2808851 LN-3
BioProject PRJNA414037
SRA SRP119824

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Supplementary file Size Download File type/resource
GSE104854_All_Counts.txt.gz 465.1 Kb (ftp)(http) TXT
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