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Series GSE103247 Query DataSets for GSE103247
Status Public on Dec 08, 2017
Title Qki5 CLIP in E14.5 mouse brain
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Mouse brains at E14.5 wild-type were subjected to HITS-CLIP to identify Qki5-binding positions on RNA.
Overall design UV-irradiated mouse brain samples obtained from 3 different mouse brains were subjected to HITS-CLIP to identify in vivo Qki5-binding sites by using Illumina MiSeq.
Contributor(s) Hayakawa-Yano Y, Okano H, Yano M
Citation(s) 29021239, 30813567
Submission date Aug 29, 2017
Last update date Jul 25, 2021
Contact name Masato Yano
Organization name Niigata University
Department Division of Neurobiology and Anatomy
Street address 757, Ichibancho, Asahimachidori, Chuo-ku, Niigata-shi,
City Niigata
ZIP/Postal code 950-0907
Country Japan
Platforms (1)
GPL16417 Illumina MiSeq (Mus musculus)
Samples (1)
GSM2758970 Qki5_CLIP1-3
This SubSeries is part of SuperSeries:
GSE103248 RNAseq in control and shQk KD mouse neural stem cells, and Qki5 CLIP in E14.5 mouse brain
BioProject PRJNA400618
SRA SRP116549

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Supplementary file Size Download File type/resource
GSE103247_RAW.tar 9.9 Mb (http)(custom) TAR (of BED, BEDGRAPH)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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