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Platform GPL9987 Query DataSets for GPL9987
Status Public on Apr 19, 2010
Title Affymetrix Human Genome U133 Plus 2.0 Array [CDF: HGU133Plus2_Hs_ENSG v12.1.0]
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Homo sapiens
Manufacturer Affymetrix
Manufacture protocol see manufacturer's web site
 
Description Custom CDF (Brainarray v12.1.0)
 
Web link http://brainarray.mbni.med.umich.edu/Brainarray/Database/CustomCDF/CDF_download.asp
Submission date Jan 28, 2010
Last update date Oct 12, 2012
Contact name Pekka Juhani Kohonen
Organization name Karolinska Institutet
Department IMM Institute of Environmental Medicine
Street address Nobelsväg 13, Box 210
City Stockholm
ZIP/Postal code SE-171 77
Country Sweden
 
Samples (14) GSM501882, GSM501883, GSM755717, GSM755718, GSM755719, GSM755720 
Series (2)
GSE20085 Expression data from parental MDA-MB-231 cells and MDA-MB-231(SA) variant
GSE30465 Asymmetric cancer cell division regulated by AKT, Reactive Oxygen Species (ROS) high versus ROS low mRNA
Relations
Alternative to GPL570 (Alternative CDF [official])

Data table header descriptions
ID Probe Set ID
SPOT_ID Ensembl gene ID
Description Description for the probeset

Data table
ID SPOT_ID Description
ENSG00000000003_at ENSG00000000003 Tetraspanin-6 (Tspan-6)(Transmembrane 4 superfamily member 6)(T245 protein)(Tetraspanin TM4-D)(A15 homolog)(Putative NF-kappa-B-activating protein 321) [Source:UniProtKB/Swiss-Prot;Acc:O43657]
ENSG00000000005_at ENSG00000000005 Tenomodulin (TeM)(hTeM)(Chondromodulin-I-like protein)(ChM1L)(hChM1L)(Myodulin)(Tendin) [Source:UniProtKB/Swiss-Prot;Acc:Q9H2S6]
ENSG00000000419_at ENSG00000000419 Dolichol-phosphate mannosyltransferase (EC 2.4.1.83)(Dolichol-phosphate mannose synthase)(DPM synthase)(Dolichyl-phosphate beta-D-mannosyltransferase)(Mannose-P-dolichol synthase)(MPD synthase) [Source:UniProtKB/Swiss-Prot;Acc:O60762]
ENSG00000000457_at ENSG00000000457 Protein-associating with the carboxyl-terminal domain of ezrin (Ezrin-binding protein PACE-1)(SCY1-like protein 3) [Source:UniProtKB/Swiss-Prot;Acc:Q8IZE3]
ENSG00000000460_at ENSG00000000460 Uncharacterized protein C1orf112 [Source:UniProtKB/Swiss-Prot;Acc:Q9NSG2]
ENSG00000000938_at ENSG00000000938 Proto-oncogene tyrosine-protein kinase FGR (C-FGR)(EC 2.7.10.2)(P55-FGR) [Source:UniProtKB/Swiss-Prot;Acc:P09769]
ENSG00000000971_at ENSG00000000971 Complement factor H Precursor (H factor 1) [Source:UniProtKB/Swiss-Prot;Acc:P08603]
ENSG00000001036_at ENSG00000001036 Plasma alpha-L-fucosidase Precursor (EC 3.2.1.51)(Alpha-L-fucoside fucohydrolase 2)(Alpha-L-fucosidase 2) [Source:UniProtKB/Swiss-Prot;Acc:Q9BTY2]
ENSG00000001084_at ENSG00000001084 Glutamate--cysteine ligase catalytic subunit (EC 6.3.2.2)(Gamma-glutamylcysteine synthetase)(Gamma-ECS)(GCS heavy chain) [Source:UniProtKB/Swiss-Prot;Acc:P48506]
ENSG00000001167_at ENSG00000001167 Nuclear transcription factor Y subunit alpha (Nuclear transcription factor Y subunit A)(NF-YA)(CAAT-box DNA-binding protein subunit A) [Source:UniProtKB/Swiss-Prot;Acc:P23511]
ENSG00000001460_at ENSG00000001460 UPF0490 protein C1orf201 [Source:UniProtKB/Swiss-Prot;Acc:Q5TH74]
ENSG00000001461_at ENSG00000001461 NIPA-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q6P499]
ENSG00000001497_at ENSG00000001497 LAS1-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q9Y4W2]
ENSG00000001561_at ENSG00000001561 Ectonucleotide pyrophosphatase/phosphodiesterase family member 4 Precursor (E-NPP4)(NPP-4)(EC 3.1.-.-) [Source:UniProtKB/Swiss-Prot;Acc:Q9Y6X5]
ENSG00000001617_at ENSG00000001617 Semaphorin-3F Precursor (Semaphorin IV)(Sema IV)(Sema III/F) [Source:UniProtKB/Swiss-Prot;Acc:Q13275]
ENSG00000001626_at ENSG00000001626 Cystic fibrosis transmembrane conductance regulator (CFTR)(Channel conductance-controlling ATPase)(EC 3.6.3.49)(cAMP-dependent chloride channel)(ATP-binding cassette transporter sub-family C member 7) [Source:UniProtKB/Swiss-Prot;Acc:P13569]
ENSG00000001629_at ENSG00000001629 Ankyrin repeat and IBR domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9P2G1]
ENSG00000001630_at ENSG00000001630 Leucine-rich repeat and death domain-containing protein LOC401387 [Source:UniProtKB/Swiss-Prot;Acc:A4D1F6]
ENSG00000001631_at ENSG00000001631 Krev interaction trapped protein 1 (Krev interaction trapped 1)(Cerebral cavernous malformations 1 protein) [Source:UniProtKB/Swiss-Prot;Acc:O00522]
ENSG00000002016_at ENSG00000002016 DNA repair protein RAD52 homolog [Source:UniProtKB/Swiss-Prot;Acc:P43351]

Total number of rows: 18394

Table truncated, full table size 2738 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary file Size Download File type/resource
GPL9987_HGU133Plus2_Hs_ENSG.cdf.gz 8.3 Mb (ftp)(http) CDF
GPL9987_HGU133Plus2_Hs_ENSG_desc.txt.gz 627.8 Kb (ftp)(http) TXT
GPL9987_HGU133Plus2_Hs_ENSG_mapping.txt.gz 2.6 Mb (ftp)(http) TXT
GPL9987_HGU133Plus2_Hs_ENSG_probe_tab.txt.gz 4.4 Mb (ftp)(http) TXT

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