GEO help: Mouse over screen elements for information.
Status
Public on Oct 15, 2009
Title
NIAID Mmeb -- Mouse 44k - mAdb version
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Mus musculus Manufacturer
Agilent Technologies
Manufacture protocol
See manufacturer's web site at http://www.agilent.com/
Description
NIAID Mmeb 44k (37.5k reporters) derived from Operon Mouse V4 oligo set. Length 60 bp probe sequences were generated by extracting base 10 through base 69 from the original 70 bp Operon probe. Agilent design number is 017138. For direct access, please contact tmyers@nih.gov.
Web link
http://rtb.niaid.nih.gov Contributor(s)
Myers TG Submission date
Oct 06, 2009
Last update date
Nov 30, 2011
Contact name
Timothy G Myers
E-mail(s)
tgm@nih.gov Organization name
National Institute of Allergy and Infectious Diseases
Department
Research Technologies Branch
Lab
Genomic Technologies Section
Street address
50 South Drive, Room 5509
City
Bethesda
State/province
MD
ZIP/Postal code
20892-8005
Country
USA
Samples (173)
GSM686354 , GSM686355 , GSM686356 , GSM686357 , GSM686358 , GSM686359
GSM686360 ,
GSM686361 ,
GSM686362 ,
GSM686363 ,
GSM686364 ,
GSM686365 ,
GSM686366 ,
GSM686367 ,
GSM686368 ,
GSM686369 ,
GSM686370 ,
GSM686371 ,
GSM686372 ,
GSM686373 ,
GSM686374 ,
GSM686375 ,
GSM686376 ,
GSM686377 ,
GSM686378 ,
GSM686379 ,
GSM686380 ,
GSM864022 ,
GSM864023 ,
GSM864024 ,
GSM864025 ,
GSM864026 ,
GSM864027 ,
GSM864028 ,
GSM864029 ,
GSM864030 ,
GSM864031 ,
GSM897535 ,
GSM897536 ,
GSM897537 ,
GSM897538 ,
GSM897539 ,
GSM897540 ,
GSM897541 ,
GSM897542 ,
GSM897543 ,
GSM897544 ,
GSM897545 ,
GSM897546 ,
GSM897547 ,
GSM1482378 ,
GSM1482379 ,
GSM1482380 ,
GSM1482381 ,
GSM1482382 ,
GSM1482383 ,
GSM1482384 ,
GSM1482385 ,
GSM1482386 ,
GSM1482387 ,
GSM1482388 ,
GSM1482389 ,
GSM1482390 ,
GSM1482391 ,
GSM1482392 ,
GSM1482393 ,
GSM1482394 ,
GSM1482395 ,
GSM1482396 ,
GSM1482397 ,
GSM1482398 ,
GSM1482399 ,
GSM1482400 ,
GSM1482401 ,
GSM1482402 ,
GSM1482403 ,
GSM1482404 ,
GSM1482405 ,
GSM1482406 ,
GSM1482407 ,
GSM1482408 ,
GSM1482409 ,
GSM1482410 ,
GSM1482411 ,
GSM1482412 ,
GSM1482413 ,
GSM1482414 ,
GSM1482415 ,
GSM1482416 ,
GSM1482417 ,
GSM1482418 ,
GSM1482419 ,
GSM1482420 ,
GSM1482421 ,
GSM1482422 ,
GSM1482423 ,
GSM1482424 ,
GSM1482425 ,
GSM1482426 ,
GSM1482427 ,
GSM1482428 ,
GSM1482429 ,
GSM1482430 ,
GSM1482431 ,
GSM1482432 ,
GSM1482433 ,
GSM1482434 ,
GSM1482435 ,
GSM1482436 ,
GSM1482437 ,
GSM1482438 ,
GSM1482439 ,
GSM1482440 ,
GSM1482441 ,
GSM1482442 ,
GSM1482443 ,
GSM1482444 ,
GSM1482445 ,
GSM1482446 ,
GSM1482447 ,
GSM1482448 ,
GSM1482449 ,
GSM1482450 ,
GSM1482451 ,
GSM1482452 ,
GSM1482453 ,
GSM1482454 ,
GSM1482455 ,
GSM1482456 ,
GSM1482457 ,
GSM1482458 ,
GSM1482459 ,
GSM1482460 ,
GSM1482461 ,
GSM1482462 ,
GSM1482463 ,
GSM1482464 ,
GSM1482465 ,
GSM1482466 ,
GSM1482467 ,
GSM1482468 ,
GSM1482469 ,
GSM1482470 ,
GSM1482471 ,
GSM1482472 ,
GSM2520622 ,
GSM2520623 ,
GSM2520624 ,
GSM2520625 ,
GSM2520626 ,
GSM2520627 ,
GSM2520628 ,
GSM2520629 ,
GSM2520630 ,
GSM2520631 ,
GSM2520632 ,
GSM2520633 ,
GSM2520634 ,
GSM2520635 ,
GSM2520636 ,
GSM2520637 ,
GSM2520638 ,
GSM2520639 ,
GSM2520640 ,
GSM2522482 ,
GSM2522483 ,
GSM2522484 ,
GSM2522485 ,
GSM2522486 ,
GSM3034700 ,
GSM3034701 ,
GSM3034702 ,
GSM3034703 Series (10)
GSE27721 Murine lung transcripts during soluble egg antigen (SEA)-induced allergic asthma and bleomycin-induced pulmonary fibrosis in Wildtype, IL-13Ra1 and IL-13Ra2 deficient mice sensitized and challenged
GSE35220 The frequency of antigen-specific T cells is regulated by self-specific non-clonal neighbors
GSE36613 Density dependent re-tuning of autoreactive T cells alleviates their pathogenicity in a lymphopenic environment
GSE60566 Disruption of transkingdom communication by antibiotics leads to immune and mitochondrial dysfunction in the gut (main)
GSE60567 Disruption of transkingdom communication by antibiotics leads to immune and mitochondrial dysfunction in the gut (LMD)
GSE60568 Disruption of transkingdom communication by antibiotics leads to immune and mitochondrial dysfunction in the gut
GSE95650 Germ-free versus conventional mouse terminal ileum
GSE95713 Glutamine supplementation suppresses herpes simplex virus reactivation I
GSE95716 Glutamine supplementation suppresses herpes simplex virus reactivation
GSE111593 TCRβ+ vs. TCRβ- CD11bhighCD14+F4/80+ splenic macrophages (Mf)
Data table header descriptions ID NIH mAdb well ID plus replicate number
MADB_WELL_ID NIH mAdb plate/well ID for oligo probe
OLIGO_ID Oligo ID
GENE Gene Name
UNIGENE UniGene ID Build #Mm.180
DESCRIPTION Gene Description
GB_ACC GenBank Accession number (vendor assigned)
GB_ACC RefSeq Accession number (mAdb assigned)
SEQUENCE Sequence of the oligo probe
SPOT_ID
Data table ID MADB_WELL_ID OLIGO_ID GENE UNIGENE DESCRIPTION GB_ACC GB_ACC SEQUENCE SPOT_ID 6686397_1
6686397
GE_BrightCorner
Control
Control
6685865_1
6685865
DarkCorner
Control
Control
6685333_1
6685333
DarkCorner
Control
Control
6684801_1
6684801
DarkCorner
Control
Control
6684269_1
6684269
DarkCorner
Control
Control
6683737_1
6683737
DarkCorner
Control
Control
6683205_1
6683205
DarkCorner
Control
Control
6682673_1
6682673
DarkCorner
Control
Control
6682141_1
6682141
DarkCorner
Control
Control
6681609_1
6681609
DarkCorner
Control
Control
6681077_1
6681077
DarkCorner
Control
Control
6680545_1
6680545
Mme-M400003073
Zfp764
297097
zinc finger protein 764 (Zfp764), mRNA.
NM_146203 NM_146203 ACAGACACACACACACACACACACACACTCGAGGTTCAGATCAGATCACAGCTACAGCTC
6680013_1
6680013
Mme-M300016566
Sh3tc2
262320
SH3 domain and tetratricopeptide repeats 2 (Sh3tc2), mRNA.
NM_172628 GAAGCTTGGCTCCTGTAAGACTTCCCAGAAGCTTACGCAGGCTAAGGCTTGAGAATTCTG
6679481_1
6679481
Mme-M400004115
Olfr720
377472
olfactory receptor 720 (Olfr720), mRNA.
NM_146392 NM_146392 AGGGGCTTTAAAGAGGGTGATAGCAAGACACAGAGGAGCCTGCAGTGTGGAAAGAAAATA
6678949_1
6678949
Mme-M400008099
Unknown
XM_138299 GCTGCTCCTCTGCCTGGTGACCTTTCCAAGCTGTATCCTTTCCCAGGTGCAGCTGAAGGA
6678417_1
6678417
Mme-M400017004
452110
Transcribed locus, strongly similar to NP_001116858.1 chromodomain protein, Y chromosome-like isoform 2 [Mus musculus]
AK037637 TGATTTTCTTGTTCTTTGGAGCAAAGATGAGGTTACTTCATGGTCAAGAGGAGAGGCTCA
6677885_1
6677885
Mme-M200006064
Chtf8
476806
CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae) (Chtf8), mRNA.
BC023107 NM_145412 ACCTAGTCATGTTCTACTGCCAGACCTTTCCCTGGGGGCTTGAACACAGAATGGGAGGTG
6677353_1
6677353
Mme-M300008250
Tfdp2
17977
transcription factor Dp 2 (Tfdp2), mRNA.
NM_178667 GTTGTGCTTGGATGCTGAAGTGGCCTTAGCAACTGGGCAGCTCCCTGCCTCAAACAGTCA
6676821_1
6676821
Mme-M400013727
Tmem194
251075
Transmembrane protein 194, mRNA (cDNA clone MGC:40914 IMAGE:5373527)
AK005897 CTCCTGCTCGGCTCCCCTAGGATGTATCCTTAGGGTAAACCTGTTAGCGCGGGGCTGCGC
6676289_1
6676289
Mme-M400003523
Lrrc61
290764
leucine rich repeat containing 61 (Lrrc61), transcript variant 2, mRNA.
NM_177736 NM_001110160 CAACGTCTCCAATAATCGGCTTACAGGGCTGGAGCCACTAGCAGCTTGTGAGAACCTGCA
37558 6033 Kbytes .Supplementary data files not provided
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