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Platform GPL9324 Query DataSets for GPL9324
Status Public on May 01, 2010
Title Affymetrix GeneChip Human Genome 133 Plus 2.0 Array [CDF: Brainarray Version 11, hgu133plus2hsentrezg]
Technology type in situ oligonucleotide
Distribution commercial
Organism Homo sapiens
Manufacturer Affymetrix
Manufacture protocol see manufacturer's web site
 
Description This identical to GPL570 but a custom cdf environmnet was used to extract data. The cdf can be found at the link below. We used the entrez version 11 for HGU-133_plus2.
 
Web link http://brainarray.mbni.med.umich.edu/Brainarray/Database/CustomCDF/CDF_download.asp
Contributor(s) Emons J, Sticht C
Submission date Sep 30, 2009
Last update date Jan 18, 2013
Contact name joyce AM emons
E-mail(s) j.emons@lumc.nl
Organization name lumc
Street address albinusdreef2
City leiden
ZIP/Postal code 2300 ZA
Country Netherlands
 
Samples (90) GSM457815, GSM457816, GSM457817, GSM457818, GSM457819, GSM457820 
Series (4)
GSE18338 Genome wide screening of human growth plates during early and progressed stage puberty in one patient
GSE28536 Expression data from the Finnish Nodular Lymphocyte Predominant Hodgkin Lymphoma (NLPHL) family and ten controls
GSE28786 siRNA off-target effects can be reduced at concentrations that match their individual potency
Relations
Alternative to GPL570 (Alternative CDF [official])

Data table header descriptions
ID
ORF
UniGeneHsID Unigene IDs
MAP Chromosomal Map
EntrezID NCBI Gene ID

Data table
ID ORF UniGeneHsID MAP EntrezID
10000_at AKT3 Hs.498292 1q43-q44 10000
10001_at MED6 Hs.497353 14q24.2 10001
10002_at NR2E3 Hs.187354 15q22.32 10002
10003_at NAALAD2 Hs.503560 11q14.3-q21 10003
100048912_at RP11-145E5.4 Hs.493614 9p21.3 100048912
100049716_at LOC100049716 Hs.655804 12p13.33 100049716
10004_at NAALADL1 Hs.13967 11q12 10004
10005_at ACOT8 Hs.444776 20q13.12 10005
10006_at ABI1 Hs.508148 10p11.2 10006
10007_at GNPDA1 Hs.633853 5q21 10007
10008_at KCNE3 Hs.523899; Hs.707163 11q13-q14 10008
100093630_at SNHG8 Hs.535762 4q26 100093630
10009_at ZBTB33 Hs.143604 Xq23 10009
1000_at CDH2 Hs.464829; Hs.606106 18q11.2 1000
100101467_at ZNF397OS Hs.464896 18q12.2 100101467
10010_at TANK Hs.556496 2q24-q31 10010
100113377_at C19orf64 Hs.266873 19p13.3 100113377
100113407_at RP11-679B17.1 Hs.146317 6p24.1 100113407
10011_at SRA1 Hs.655927 5q31.3 10011
100124700_at HOTAIR Hs.197076 12q13.13 100124700

Total number of rows: 17788

Table truncated, full table size 691 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary file Size Download File type/resource
GPL9324_HGU133Plus2_Hs_ENTREZG_11.0.1.zip.gz 13.3 Mb (ftp)(http) ZIP

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