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Platform GPL872 Query DataSets for GPL872
Status Public on Jan 02, 2004
Title Agilent Mouse cDNA Microarray (G4104A) [layout B]
Technology type spotted DNA/cDNA
Distribution commercial
Organism Mus musculus
Manufacturer Agilent
Manufacture protocol see manufacturer's web site
 
Description 8,737 unique clones
Sourced from Incyte's mouse UniGene 1 clone set
Barcode location:Bottom
Scan Side:Front

This platform should be used for the following prints:

000490_D_20020516_FSPortraitBcodeDown
000522_D_20020801_FSPortraitBcodeDown
000522_D_20030121_FSPortraitBcodeDown

Please reference this platform if you used an array with the same layout, even if the print lot is different than specified above. The GEO staff will update the description of this platform to include additional print lots as encountered.

Print-specific information should be accounted for in the sample hybridization tables (eg. NULL value insertions for spots to be ignored).
 
Submission date Jan 02, 2004
Last update date Aug 17, 2005
Organization Agilent Technologies
E-mail(s) cag_sales-na@agilent.com
Phone 877-424-4536
URL http://www.agilent.com
Department
Street address
City Palo Alto
State/province CA
ZIP/Postal code 94304
Country USA
 
Samples (85) GSM94528, GSM98061, GSM98062, GSM98063, GSM98064, GSM98065 
Series (10)
GSE4312 Radiation-induced genes commonly expressed in lung and skin among three strains of mice.
GSE4793 Sex-specific gene expression in the mouse heart
GSE5963 Gene expression of 4hr serum stimulated mouse ES cells after 72hr serum starvation

Data table header descriptions
ID feature number
ROW row
COL column
SPOT_ID Agilent probe name
GB_ACC GenBank accession and systematic name
PRIMARY_NAME primary name
CONTROL_TYPE_1 000490_D_20020516_FSPortraitBcodeDown
UNIGENE UniGene ID
CONTROL_TYPE_2 000522_D_20020801_FSPortraitBcodeDown
CONTROL_TYPE_3 000522_D_20030121_FSPortraitBcodeDown

Data table
ID ROW COL SPOT_ID GB_ACC PRIMARY_NAME CONTROL_TYPE_1 UNIGENE CONTROL_TYPE_2 CONTROL_TYPE_3
1 126 107 Fiducial Fiducial positive positive positive
2 125 107 CAB Agilent QC positive positive positive
3 124 107 0 Agilent_BLANK notprobe notprobe notprobe
4 123 107 CAB Agilent QC positive positive positive
5 122 107 0 Agilent_BLANK notprobe notprobe notprobe
6 121 107 CAB Agilent QC positive positive positive
7 120 107 0 Agilent_BLANK notprobe notprobe notprobe
8 119 107 313176 W10495 peroxisome proliferator activated receptor alpha FALSE 1373 FALSE FALSE
9 118 107 315069 AI605702 ESTs FALSE 23952 FALSE FALSE
10 117 107 539995 AA122644 RIKEN cDNA 2610036N15 gene ignore 46614 ignore ignore
11 116 107 540792 AI892539 ESTs, Moderately similar to PEROXISOME BIOSYNTHESIS PROTEIN PAY4 [Yarrowia lipolytica] ignore 41268 ignore ignore
12 115 107 303445 AI627143 ESTs FALSE 34852 FALSE FALSE
13 114 107 314568 W10710 inhibin alpha ignore 1100 ignore ignore
14 113 107 821342 AI552351 trophoblast glycoprotein FALSE 20864 FALSE FALSE
15 112 107 821737 AA413037 ESTs FALSE 23957 FALSE FALSE
16 111 107 865327 AA450909 proteasome (prosome, macropain) subunit, beta type 6 FALSE 98 FALSE FALSE
17 110 107 865547 AI552931 synbindin FALSE 29814 FALSE FALSE
18 109 107 821372 AI552353 RIKEN cDNA 2010317E03 gene ignore 28897 ignore ignore
19 108 107 821786 AI549610 karyopherin (importin) alpha 2 FALSE 12508 FALSE FALSE
20 107 107 517293 AA065510 defensin beta 1 FALSE 5341 FALSE FALSE

Total number of rows: 13482

Table truncated, full table size 955 Kbytes.






Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary data files not provided
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