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Platform GPL6254 Query DataSets for GPL6254
Status Public on Dec 07, 2007
Title Phalanx Human OneArray
Technology type spotted oligonucleotide
Distribution commercial
Organism Homo sapiens
Manufacturer Phalanx Biotech Group
Manufacture protocol See http://www.phalanxbiotech.com/ for updated protocols
Support glass
 
Description Phalanx Biotech Group's Human OneArray contains 32,048 features, 30968 detection probes and 1080 control probes, spotted onto glass slides using a proprietary non-contact printing method. Detection probes are annotated against the human genome and grouped into the following categories:
Group 1 - gene specific: exon
Group 2 - intron hit
Group 3 - intergenic
Group 4 - multi-gene hits
Group 5 - no hit to genome
Group 6 - >200 hits to genome
 
Web link http://www.phalanxbiotech.com/Products/Product_Human2.html
Submission date Dec 06, 2007
Last update date Aug 28, 2014
Contact name Phalanx Biotech Group Inc.
Phone 886-3-5781168
URL http://www.phalanxbiotech.com
Organization name Phalanx Biotech
Department Bioinformatics
Street address 6 Technology Road 5, 6th Floor
City Hsinchu Science Park
State/province Hsinchu
ZIP/Postal code 30077
Country Taiwan
 
Samples (653) GSM247460, GSM247461, GSM247462, GSM247463, GSM247464, GSM247465 
Series (41)
GSE9806 A Time Course Analysis of the Effects of Marinobufagenin in Human Dermal Fibroblasts
GSE12242 Gene expression profiling in p53 and p73 double knockdown HCT116-3(6) cells
GSE12922 Two Supporting Factors Greatly Improve the Efficiency of Human iPS Cell Generation
Relations
Alternative to GPL13287 (Alternative annotation [HOA5 release 1.0])
Alternative to GPL19137 (Alternative annotation [HOA6 1.0])

Data table header descriptions
ID
GROUP Phalanx Annotation Group
ENSEMBL_GENE_ID Ensembl Gene Identifier
ENSEMBL_TRANSCRIPT_ID Ensembl Transcript Identifier
CHR_NAME Chromosome Name
GENE_SYMBOL HGNC Approved Gene Symbol
DESCRIPTION Gene Description
GO_ID Gene Ontology IDs
SEQUENCE Probe Sequence
ORF GenBank gene identifier

Data table
ID GROUP ENSEMBL_GENE_ID ENSEMBL_TRANSCRIPT_ID CHR_NAME GENE_SYMBOL DESCRIPTION GO_ID SEQUENCE ORF
PH_hs_0000002 1 ENSG00000105352 ENST00000221954 19 CEACAM4 carcinoembryonic antigen-related cell adhesion molecule 4 [Source:RefSeq_peptide;Acc:NP_001808] GO:0005624,GO:0005887 AACTATTCAAGCCTATTATTGGCACAAGGGGAAAACGGCAGAAGGGAGCCCTCTCATTGC ENSG00000105352
PH_hs_0000003 4 ENSG00000204496,ENSG00000206330,ENSG00000173503 ENST00000396143,ENST00000383304,ENST00000400272,ENST00000383303,ENST00000383499,ENST00000376133 6,c6_COX,c6_QBL GTGAGAGGGCATGCGCACAAGGCTGACCAAGAGAGAAAGAAGTAGGCATGAGGGATCACA ENSG00000204496, ENSG00000206330, ENSG00000173503
PH_hs_0000004 1 ENSG00000075239 ENST00000265838 11 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial precursor (EC 2.3.1.9) (Acetoacetyl-CoA thiolase) (T2). [Source:Uniprot/SWISSPROT;Acc:P24752] GO:0005743,GO:0005739,GO:0003985,GO:0016740,GO:0008415,GO:0005515 CATGCTAATTCAGAAGCTGTAGACAACCTCTGCTATTTAAGGAGACAACCCTATGTGACC ENSG00000075239
PH_hs_0000005 1 ENSG00000105894 ENST00000393083,ENST00000348225 7 PTN Pleiotrophin precursor (PTN) (Heparin-binding growth-associated molecule) (HB-GAM) (Heparin-binding growth factor 8) (HBGF-8) (Osteoblast-specific factor 1) (OSF-1) (Heparin-binding neurite outgrowth-promoting factor 1) (HBNF-1) (Heparin-binding brain mit [Source:Uniprot/SWISSPROT;Acc:P21246] GO:0007185,GO:0005783,GO:0005615,GO:0005125,GO:0004864,GO:0007399,GO:0007612,GO:0008083,GO:0008201,GO:0008283,GO:0008284,GO:0030282,GO:0000074 GCTGGATTAAAAGATGTCACCTGTGGAACATAAAAAGGACATCAGCAAACAGGATCAGTT ENSG00000105894
PH_hs_0000006 1 ENSG00000169403 ENST00000373857,ENST00000305392 1 PTAFR Platelet-activating factor receptor (PAF-R). [Source:Uniprot/SWISSPROT;Acc:P25105] GO:0006935,GO:0005887,GO:0005543,GO:0004992,GO:0004974,GO:0004947,GO:0004945,GO:0004872,GO:0001816,GO:0006954,GO:0006955,GO:0007165,GO:0048015,GO:0045028,GO:0016494,GO:0016493,GO:0016021,GO:0016020,GO:0015057,GO:0007596,GO:0007186,GO:0001584 TAAACCACCTAGTTCTCCCCGATGGGGCATCGGTCTAAAGCTTTGGGGGAGTGGGCGCAG ENSG00000169403
PH_hs_0000007 1 ENSG00000165195 ENST00000358698,ENST00000333590 X PIGA Phosphatidylinositol N-acetylglucosaminyltransferase subunit A (EC 2.4.1.198) (GlcNAc-PI synthesis protein) (Phosphatidylinositol- glycan biosynthesis class A protein) (PIG-A). [Source:Uniprot/SWISSPROT;Acc:P37287] GO:0016020,GO:0016021,GO:0016757,GO:0017176,GO:0009058,GO:0009893,GO:0000506,GO:0005515,GO:0005783,GO:0005789,GO:0006506 GTCAGTTTGCACTGGTCGGTATATGGAAACACATTGCTCTACCCTGCTACTTAGTTGATT ENSG00000165195
PH_hs_0000008 1 ENSG00000147224 ENST00000372435,ENST00000372428 X PRPS1L1 Ribose-phosphate pyrophosphokinase I (EC 2.7.6.1) (Phosphoribosyl pyrophosphate synthetase I) (PRS-I) (PPRibP). [Source:Uniprot/SWISSPROT;Acc:P60891] GO:0006144,GO:0007399,GO:0009116,GO:0009156,GO:0009165,GO:0016301,GO:0016740,GO:0016978,GO:0044249,GO:0005575,GO:0004749,GO:0000287 TTTCTTTGTTGAGAACAACTAGCAACAAAGGCAACCCATGTGTGACCAGTTCTCCCCAAG ENSG00000147224
PH_hs_0000009 1 ENSG00000127947 ENST00000248594 7 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 (EC 3.1.3.48) (Protein-tyrosine phosphatase G1) (PTPG1) (PTP-PEST). [Source:Uniprot/SWISSPROT;Acc:Q05209] GO:0017124,GO:0016791,GO:0016787,GO:0016311,GO:0006470,GO:0005829,GO:0005737,GO:0005625,GO:0004726,GO:0004725,GO:0004721 GGGAGCTAGAAGACACTTTAAGTTATACTGGAAAATTCAGGTGCCACTGAAAGCCAGATT ENSG00000127947
PH_hs_0000010 1 ENSG00000117118 ENST00000375499 1 SDHB Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial precursor (EC 1.3.5.1) (Ip) (Iron-sulfur subunit of complex II). [Source:Uniprot/SWISSPROT;Acc:P21912] GO:0016491,GO:0046872,GO:0051536,GO:0051537,GO:0051538,GO:0051539,GO:0016020,GO:0009055,GO:0008177,GO:0005506,GO:0005739,GO:0005743,GO:0006099,GO:0006118,GO:0006810 GGATTGACACCAACCTCAATAAGGTCTCAAAAATCTACCCTCTTCCACACATGTATGTGA ENSG00000117118
PH_hs_0000011 1 ENSG00000115602 ENST00000311734 2 IL1RL1 Interleukin-1 receptor-like 1 precursor (ST2 protein). [Source:Uniprot/SWISSPROT;Acc:Q01638] GO:0009986,GO:0005515,GO:0004908,GO:0016021,GO:0016020,GO:0007165,GO:0006955,GO:0004888,GO:0005057,GO:0005575 GCAGGGACATCATCTCTTCCATCTTTGGGTCCTTAGTGCAATACCTGGCAGCTAGCCAGT ENSG00000115602
PH_hs_0000012 1 ENSG00000147168 ENST00000374202,ENST00000276110,ENST00000374188,ENST00000374191 X IL2RG Cytokine receptor common gamma chain precursor (Gamma-C) (Interleukin- 2 receptor gamma chain) (IL-2R gamma chain) (p64) (CD132 antigen). [Source:Uniprot/SWISSPROT;Acc:P31785] GO:0005515,GO:0009897,GO:0009986,GO:0019976,GO:0019982,GO:0032831,GO:0004872,GO:0004896,GO:0016020,GO:0004911,GO:0004913,GO:0004917,GO:0005887,GO:0006955,GO:0007165 GAAGAACCCCAGGGTCCTGTAGCCCTAAGTGGTACTAACTTTCCTTCATTCAACCCACCT ENSG00000147168
PH_hs_0000013 1 ENSG00000080839 ENST00000373664 20 RBL1 Retinoblastoma-like protein 1 (107 kDa retinoblastoma-associated protein) (PRB1) (P107). [Source:Uniprot/SWISSPROT;Acc:P28749] GO:0006355,GO:0007049,GO:0016568,GO:0043550,GO:0045786,GO:0006350,GO:0005634,GO:0005515,GO:0005667,GO:0000122 ACACTCATCCTTGCTTTCCAGCCCTAAGCCATCTCAGCCTGATGTCACAACCCAATAAAT ENSG00000080839
PH_hs_0000014 1 ENSG00000145020 ENST00000273588 3 AMT Aminomethyltransferase, mitochondrial precursor (EC 2.1.2.10) (Glycine cleavage system T protein) (GCVT). [Source:Uniprot/SWISSPROT;Acc:P48728] GO:0004047,GO:0005737,GO:0006546,GO:0008483,GO:0016740,GO:0005960,GO:0005739 CCATGGTTTTTCACATTGCAAAGGGTAATAACATGGGCAGTGCGGACTTAGGCTACCCCC ENSG00000145020
PH_hs_0000015 1 ENSG00000109758 ENST00000382774 4 HGFAC Hepatocyte growth factor activator precursor (EC 3.4.21.-) (HGF activator) (HGFA) [Contains: Hepatocyte growth factor activator short chain; Hepatocyte growth factor activator long chain]. [Source:Uniprot/SWISSPROT;Acc:Q04756] GO:0006928,GO:0006508,GO:0005576,GO:0005515,GO:0005509,GO:0004252 GTGACGCAGACCTTCGGCATCGAGAAGTACATCCCGTACACCCTGTACTCGGTGTTCAAC ENSG00000109758
PH_hs_0000016 1 ENSG00000104760 ENST00000398056,ENST00000381840,ENST00000221204,ENST00000381841,ENST00000398054 8 FGL1 Fibrinogen-like protein 1 precursor (Hepatocyte-derived fibrinogen- related protein 1) (HFREP-1) (Hepassocin) (HP-041). [Source:Uniprot/SWISSPROT;Acc:Q08830] GO:0005102,GO:0005577,GO:0007165 GGTGTATACTACAGCGGCCCCTACACGGCTAAAACAGACAATGGGATTGTCTGGTACACC ENSG00000104760
PH_hs_0000017 1 ENSG00000015413 ENST00000261615,ENST00000393092 16 DPEP1 Dipeptidase 1 precursor (EC 3.4.13.19) (Microsomal dipeptidase) (Renal dipeptidase) (hRDP) (Dehydropeptidase-I). [Source:Uniprot/SWISSPROT;Acc:P16444] GO:0005783,GO:0005792,GO:0006508,GO:0008237,GO:0008239,GO:0008270,GO:0016020,GO:0046872,GO:0048503,GO:0004237 AGGACGTCTCCAAGTATCCAGACCTGATCGCTGAGCTGCTCAGGAGGAACTGGACGGAGG ENSG00000015413
PH_hs_0000018 1 ENSG00000138078 ENST00000260648,ENST00000378511,ENST00000378520 2 PREPL prolyl endopeptidase-like isoform D [Source:RefSeq_peptide;Acc:NP_001035845] GO:0008236,GO:0004252,GO:0004287,GO:0006508 ATGAAAGCACATGTTTCAGTGCCACTCACATAAGAAGTGCCCGGTAAGTGTTAGCTATTA ENSG00000138078
PH_hs_0000019 1 ENSG00000102678 ENST00000382353 13 FGF9 Glia-activating factor precursor (GAF) (Fibroblast growth factor 9) (FGF-9) (HBGF-9). [Source:Uniprot/SWISSPROT;Acc:P31371] GO:0030949,GO:0030326,GO:0030324,GO:0030238,GO:0030178,GO:0042472,GO:0045743,GO:0045880,GO:0048505,GO:0048566,GO:0048706,GO:0050679,GO:0060045,GO:0030154,GO:0008584,GO:0008543,GO:0000074,GO:0001525,GO:0001649,GO:0002053,GO:0002062,GO:0005615,GO:0006606,GO:0007165,GO:0007267,GO:0007275,GO:0008083,GO:0008201,GO:0008283 TGGTATAATACGTACTCATCAAACCTATATAAGCACGTGGACACTGGAAGGCGATACTAT ENSG00000102678
PH_hs_0000020 1 ENSG00000117592 ENST00000340385 1 PRDX6 Peroxiredoxin-6 (EC 1.11.1.15) (Antioxidant protein 2) (1-Cys peroxiredoxin) (1-Cys PRX) (Acidic calcium-independent phospholipase A2) (EC 3.1.1.-) (aiPLA2) (Non-selenium glutathione peroxidase) (EC 1.11.1.7) (NSGPx) (24 kDa protein) (Liver 2D page spot 4 [Source:Uniprot/SWISSPROT;Acc:P30041] GO:0016209,GO:0016491,GO:0016787,GO:0031410,GO:0051920,GO:0016042,GO:0009395,GO:0004623,GO:0005737,GO:0005764,GO:0005829,GO:0006979 GAGGTGTAGCAGGTGTGAGCAATATTAGTGCCATGTGCCTTTCACACAGGGTTTGCATTT ENSG00000117592
PH_hs_0000021 1 ENSG00000163394 ENST00000295589 4 CCKAR Cholecystokinin type A receptor (CCK-A receptor) (CCK-AR) (Cholecystokinin-1 receptor) (CCK1-R). [Source:Uniprot/SWISSPROT;Acc:P32238] GO:0007204,GO:0007409,GO:0007584,GO:0007586,GO:0007631,GO:0008188,GO:0015054,GO:0016021,GO:0030900,GO:0007200,GO:0007186,GO:0007165,GO:0001584,GO:0001764,GO:0004872,GO:0004951,GO:0004983,GO:0005000,GO:0005886,GO:0005887,GO:0006939 TGTCCAGGTTCTCGTACAGCCATATGAGTGCCTCGGTGCCACCCCAGTGAGATGTCCCCT ENSG00000163394

Total number of rows: 30968

Table truncated, full table size 7816 Kbytes.




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