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GEO help: Mouse over screen elements for information. |
|
| Status |
Public on Dec 13, 2007 |
| Title |
JCVI PFGRC Burkholderia mallei 22K v2 array designed primarily based on strain GB8 horse 4 |
| Technology type |
spotted oligonucleotide |
| Distribution |
non-commercial |
| Organisms |
Burkholderia mallei; Burkholderia pseudomallei |
| Manufacturer |
JCVI PFGRC |
| Manufacture protocol |
2QBM, with arrayer GENETIX, machine cycles 0, pen id 0, pen cycles 0, operator 0, humidity control 0, humidity set point0.000
|
| Support |
glass |
| Coating |
aminosilane |
| |
|
| Description |
This set includes 9826 oligonucleotides, has 22176 spots distributed in 48 blocks.
|
| |
|
| Web link |
http://pfgrc.jcvi.org/descriptionPages.shtml
|
| Submission date |
Sep 12, 2007 |
| Last update date |
Dec 13, 2007 |
| Contact name |
PFGRC JCVI |
| E-mail(s) |
jli@jcvi.org
|
| Phone |
3017957840
|
| Organization name |
J. Craig Venter Institute
|
| Department |
PFGRC
|
| Street address |
9704 Medical Center Drive
|
| City |
Rockville |
| State/province |
MD |
| ZIP/Postal code |
20850 |
| Country |
USA |
| |
|
| Data table header descriptions |
| ID |
|
| Sequence |
Oligo sequence |
| GC% |
GC content of the sequence |
| Internal Repeat Score |
Internal repeat score |
| Self-Annealing Score |
Self-anneal score |
| Primary Strain |
The strain of primary target |
| Primary Target |
Locus primarily hit by the oligo |
| Common Name of Primary Target |
Common name of primary target |
| Gene Symbol |
Gene symbol |
| Strain ATCC 23344 |
Target map of strain ATCC 23344 |
| Strain K96243 |
Target map of strain K96243 |
| Strain 1710b |
Target map of strain 1710b |
| Strain GB8 horse 4 |
Target map of strain GB8 horse 4 |
| ORF |
primary target linkin Entrez Gene |
| SPOT_ID |
|
| Data table |
| ID |
Sequence |
GC% |
Internal Repeat Score |
Self-Annealing Score |
Primary Strain |
Primary Target |
Common Name of Primary Target |
Gene Symbol |
Strain ATCC 23344 |
Strain K96243 |
Strain 1710b |
Strain GB8 horse 4 |
ORF |
SPOT_ID |
| 2QBM00001_A_1 |
TTCAAGCGCTACTATCATTCGCTCGACCTGCTGCTCATCGACGACATCCAATTCTTCTCGGGCAAGTCGC |
52.86 |
30 |
78 |
GB8 horse 4 |
BmalG_01001625 |
COG0593: ATPase involved in DNA replication initiation |
|
BMA0001::70::100.0::1.3E-10::+ |
BPSL0075::70::100.0::1.4E-10::+ |
BURPS1710b_0301::70::100.0::1.4E-10::+ |
BmalG_01001625::70::100.0::1.2E-10::+ |
BmalG_01001625 |
|
| 2QBM00001_A_10 |
CGTCGGGCGGATCATGCCGACGCCCGAAGCCGAATCCGAATCCGAATCCGAATCCGACGCCGACGCCGAG |
67.14 |
35 |
113 |
K96243 |
BPSL0105 |
hypothetical protein |
|
|
BPSL0105::70::100.0::1.2E-10::+ |
|
|
BPSL0105 |
|
| 2QBM00001_A_11 |
GAGCTGGATGCTATGGTTGGCGGGAGCGTCGACGTTCCTGCTGTTCGCGTATCTCGTCTACGCGCTGCTG |
61.43 |
32 |
94 |
1710b |
BURPS1710b_1392 |
potassium-transporting ATPase, KdpF subunit-related protein |
|
BMA1877::70::100.0::1.6E-10::+ |
BPSL1170::70::100.0::1.6E-10::+ |
BURPS1710b_1392::70::100.0::1.1E-10::+ |
|
BURPS1710b_1392 |
|
| 2QBM00001_A_12 |
GAAGAAGAGCAAGTTCACCGAAGAACAGATCGCCTATGCGTTGAAGCAGGCCGAGCTGGGCACGCCGGTC |
58.57 |
30 |
89 |
K96243 |
BPSS0402B |
pseudo |
|
|
BPSS0402B::70::100.0::1.2E-10::+ |
|
|
BPSS0402B |
|
| 2QBM00001_A_13 |
CGCTCAGGCCATGCGTCGGCGAAGCGGCCGCGAGCAGACGCACCGGCATACTGAAATTTCGAAGTACTGA |
61.43 |
30 |
118 |
ATCC 23344 |
BMA2664 |
hypothetical protein |
|
BMA2664::70::100.0::1.6E-10::+ |
|
BURPS1710b_0271::70::100.0::1.4E-10::- |
|
BMA2664 |
|
| 2QBM00001_A_14 |
GAACGGATATTGCGCTGCACCGTCGCTCGCCGTCTCGAGTCGTTTTTGAGCCGCTTTCCGCCGATTGCCG |
61.43 |
32 |
85 |
ATCC 23344 |
BMA1137 |
hypothetical protein |
|
BMA1137::70::100.0::1.2E-10::+ |
|
|
|
BMA1137 |
|
| 2QBM00001_A_15 |
ACTCGAGTCGATCATGCGGGAGAAAAGACGCTCGCGAGCCGTCGAGAGGAGATGGTGTTGCGTGGCTCGC |
61.43 |
31 |
93 |
ATCC 23344 |
BMAA0156 |
hypothetical protein |
|
BMAA0156::70::100.0::1.6E-10::+ |
|
|
|
BMAA0156 |
|
| 2QBM00001_A_16 |
CGTCGCCCGGCCCGCGCCGCACGCGGGCCATCGCGCGCTGCACGTTTTATCGCCGTCCATTAACTATTAG |
67.14 |
31 |
100 |
ATCC 23344 |
BMA2215 |
hypothetical protein |
|
BMA2215::70::100.0::1.2E-10::+ |
|
BURPS1710b_1306::70::98.57143::3.4E-10::+ |
|
BMA2215 |
|
| 2QBM00001_A_17 |
TGGCAATCCAATGTTTTCCCGGAATGCACGTATCGAAGAAGACTTATCTCGGTATGCAAAGGAAAATGAA |
41.43 |
30 |
109 |
ATCC 23344 |
BMAA0322 |
hypothetical protein |
|
BMAA0322::70::100.0::1.6E-10::+ |
|
BURPS1710b_A0849::70::100.0::1.6E-10::- |
|
BMAA0322 |
|
| 2QBM00001_A_18 |
AAGCAGCAGTGCCAGGAAATTTCGCGCGGCTGTGAAGAAGCATCGCTTGCGGCCATGTTCGACGGCAGTG |
58.57 |
31 |
90 |
ATCC 23344 |
BMA2656 |
hypothetical protein |
|
BMA2656::70::100.0::1.2E-10::+ |
|
BURPS1710b_0281::56::100.0::2.1E-7::- |
|
BMA2656 |
|
| 2QBM00001_A_19 |
GCACGTCATGGCGCAGCGCCACGATTGCATCAACGGAACGGTCGGCTCGAATTCGGATCTGAGGATTTGA |
57.14 |
30 |
76 |
1710b |
BURPS1710b_0216 |
hypothetical protein |
|
BMA2915::70::100.0::7.9E-11::+ |
|
BURPS1710b_0216::70::100.0::1.6E-10::+ |
|
BURPS1710b_0216 |
|
| 2QBM00001_A_2 |
AGAATGCGTACATCGAATCGTTCAACGGCAAGTTCCGCGACGAATGCCTTAACGAGCACTGGTTCACGAC |
51.43 |
31 |
129 |
GB8 horse 4 |
BmalG_01002716 |
COG2801: Transposase and inactivated derivatives |
|
BMA1035::70::100.0::3.5E-11::+,BMA0005::70::100.0::5.9E-11::+,BMA0110::70::100.0::5.9E-11::+,BMA0131::70::100.0::5.9E-11::+,BMA0266::70::100.0::5.9E-11::+,BMA0284::70::100.0::5.9E-11::+,BMA0321::70::100.0::5.9E-11::+,BMA0441::70::100.0::5.9E-11::+,BMA0483::70::100.0::5.9E-11::+,BMA0495::70::100.0::5.9E-11::+,BMA0500::70::100.0::5.9E-11::+,BMA0573::70::100.0::5.9E-11::+,BMA0586::70::100.0::5.9E-11::+,BMA0658::70::100.0::5.9E-11::+,BMA0721::70::100.0::5.9E-11::+,BMA0757::70::100.0::5.9E-11::+,BMA0806::70::100.0::5.9E-11::+,BMA0857::70::100.0::5.9E-11::+,BMA0899::70::100.0::5.9E-11::+,BMA0948::70::100.0::5.9E-11::+,BMA1041::70::100.0::5.9E-11::+,BMA1077::70::100.0::5.9E-11::+,BMA1083::70::100.0::5.9E-11::+,BMA1119::70::100.0::5.9E-11::+,BMA1203::70::100.0::5.9E-11::+,BMA1216::70::100.0::5.9E-11::+,BMA1232::70::100.0::5.9E-11::+,BMA1257::70::100.0::5.9E-11::+,BMA1409::70::100.0::5.9E-11::+,BMA1478::70::100.0::5.9E-11::+,BMA1759::70::100.0::5.9E-11::+,BMA1841::70::100.0::5.9E-11::+,BMA1954::70::100.0::5.9E-11::+,BMA1975::70::100.0::5.9E-11::+,BMA2087::70::100.0::5.9E-11::+,BMA2199::70::100.0::5.9E-11::+,BMA2225::70::100.0::5.9E-11::+,BMA2249::70::100.0::5.9E-11::+,BMA2268::70::100.0::5.9E-11::+,BMA2283::70::100.0::5.9E-11::+,BMA2527::70::100.0::5.9E-11::+,BMA2564::70::100.0::5.9E-11::+,BMA2595::70::100.0::5.9E-11::+,BMA2655::70::100.0::5.9E-11::+,BMA2687::70::100.0::5.9E-11::+,BMA2759::70::100.0::5.9E-11::+,BMA2793::70::100.0::5.9E-11::+,BMA2834::70::100.0::5.9E-11::+,BMA2899::70::100.0::5.9E-11::+,BMA3006::70::100.0::5.9E-11::+,BMA3026::70::100.0::5.9E-11::+,BMA3091::70::100.0::5.9E-11::+,BMA3351::70::100.0::5.9E-11::+,BMA3394::70::100.0::5.9E-11::+,BMA1296::70::100.0::5.9E-11::+,BMA2528::70::100.0::5.9E-11::+,BMAA0083::70::100.0::5.9E-11::+,BMAA0105::70::100.0::5.9E-11::+,BMAA0174::70::100.0::5.9E-11::+,BMAA0276::70::100.0::5.9E-11::+,BMAA0342::70::100.0::5.9E-11::+,BMAA0413::70::100.0::5.9E-11::+,BMAA0436::70::100.0::5.9E-11::+,BMAA0497::70::100.0::5.9E-11::+,BMAA0552::70::100.0::5.9E-11::+,BMAA0555::70::100.0::5.9E-11::+,BMAA0584::70::100.0::5.9E-11::+,BMAA0647::70::100.0::5.9E-11::+,BMAA0724::70::100.0::5.9E-11::+,BMAA0811::70::100.0::5.9E-11::+,BMAA0845::70::100.0::5.9E-11::+,BMAA0869::70::100.0::5.9E-11::+,BMAA0887::70::100.0::5.9E-11::+,BMAA0890::70::100.0::5.9E-11::+,BMAA0918::70::100.0::5.9E-11::+,BMAA0992::70::100.0::5.9E-11::+,BMAA1005::70::100.0::5.9E-11::+,BMAA1023::70::100.0::5.9E-11::+,BMAA1054::70::100.0::5.9E-11::+,BMAA1175::70::100.0::5.9E-11::+,BMAA1227::70::100.0::5.9E-11::+,BMAA1308::70::100.0::5.9E-11::+,BMAA1378::70::100.0::5.9E-11::+,BMAA1412::70::100.0::5.9E-11::+,BMAA1503::70::100.0::5.9E-11::+,BMAA1512::70::100.0::5.9E-11::+,BMAA1644::70::100.0::5.9E-11::+,BMAA1741::70::100.0::5.9E-11::+,BMAA1760::70::100.0::5.9E-11::+,BMAA1789::70::100.0::5.9E-11::+,BMAA1947::70::100.0::5.9E-11::+,BMAA2073::70::100.0::5.9E-11::+ |
BPSL0090::70::100.0::5.9E-11::+,BPSL1657::70::100.0::5.9E-11::+,BPSL3117::70::100.0::6.4E-11::+ |
BURPS1710b_0298::70::100.0::5.9E-11::+,BURPS1710b_0312::70::100.0::5.9E-11::+,BURPS1710b_0783::70::100.0::5.9E-11::+,BURPS1710b_1719::70::100.0::5.9E-11::+,BURPS1710b_A0167::70::100.0::5.9E-11::+,BURPS1710b_A1166::70::100.0::5.9E-11::+ |
BmalG_01002716::70::100.0::2.2E-11::+,BmalG_01000548::70::100.0::3.2E-11::+,BmalG_01000037::70::100.0::4.4E-11::+,BmalG_01000058::70::100.0::4.4E-11::+,BmalG_01000148::70::100.0::4.4E-11::+,BmalG_01000244::70::100.0::4.4E-11::+,BmalG_01000276::70::100.0::4.4E-11::+,BmalG_01000330::70::100.0::4.4E-11::+,BmalG_01000391::70::100.0::4.4E-11::+,BmalG_01000514::70::100.0::4.4E-11::+,BmalG_01000515::70::100.0::4.4E-11::+,BmalG_01000593::70::100.0::4.4E-11::+,BmalG_01000692::70::100.0::4.4E-11::+,BmalG_01000754::70::100.0::4.4E-11::+,BmalG_01000783::70::100.0::4.4E-11::+,BmalG_01000848::70::100.0::4.4E-11::+,BmalG_01000900::70::100.0::4.4E-11::+,BmalG_01000922::70::100.0::4.4E-11::+,BmalG_01001187::70::100.0::4.4E-11::+,BmalG_01001223::70::100.0::4.4E-11::+,BmalG_01001250::70::100.0::4.4E-11::+,BmalG_01001355::70::100.0::4.4E-11::+,BmalG_01001446::70::100.0::4.4E-11::+,BmalG_01001468::70::100.0::4.4E-11::+,BmalG_01001564::70::100.0::4.4E-11::+,BmalG_01001629::70::100.0::4.4E-11::+,BmalG_01001819::70::100.0::4.4E-11::+,BmalG_01001863::70::100.0::4.4E-11::+,BmalG_01001903::70::100.0::4.4E-11::+,BmalG_01002040::70::100.0::4.4E-11::+,BmalG_01002085::70::100.0::4.4E-11::+,BmalG_01002141::70::100.0::4.4E-11::+,BmalG_01002172::70::100.0::4.4E-11::+,BmalG_01002230::70::100.0::4.4E-11::+,BmalG_01002242::70::100.0::4.4E-11::+,BmalG_01002298::70::100.0::4.4E-11::+,BmalG_01002457::70::100.0::4.4E-11::+,BmalG_01002624::70::100.0::4.4E-11::+,BmalG_01002632::70::100.0::4.4E-11::+,BmalG_01002666::70::100.0::4.4E-11::+,BmalG_01002671::70::100.0::4.4E-11::+,BmalG_01002701::70::100.0::4.4E-11::+,BmalG_01002762::70::100.0::4.4E-11::+,BmalG_01002785::70::100.0::4.4E-11::+,BmalG_01002799::70::100.0::4.4E-11::+,BmalG_01002811::70::100.0::4.4E-11::+,BmalG_01002826::70::100.0::4.4E-11::+,BmalG_01002875::70::100.0::4.4E-11::+,BmalG_01002959::70::100.0::4.4E-11::+,BmalG_01002981::70::100.0::4.4E-11::+,BmalG_01003045::70::100.0::4.4E-11::+,BmalG_01003075::70::100.0::4.4E-11::+,BmalG_01003102::70::100.0::4.4E-11::+,BmalG_01003113::70::100.0::4.4E-11::+,BmalG_01003115::70::100.0::4.4E-11::+,BmalG_01003134::70::100.0::4.4E-11::+,BmalG_01003170::70::100.0::4.4E-11::+,BmalG_01003203::70::100.0::4.4E-11::+,BmalG_01003245::70::100.0::4.4E-11::+,BmalG_01003444::70::100.0::4.4E-11::+,BmalG_01003460::70::100.0::4.4E-11::+,BmalG_01003462::70::100.0::4.4E-11::+,BmalG_01003540::70::100.0::4.4E-11::+,BmalG_01003637::70::100.0::4.4E-11::+,BmalG_01003741::70::100.0::4.4E-11::+,BmalG_01003759::70::100.0::4.4E-11::+,BmalG_01003817::70::100.0::4.4E-11::+,BmalG_01003867::70::100.0::4.4E-11::+,BmalG_01003882::70::100.0::4.4E-11::+,BmalG_01003924::70::100.0::4.4E-11::+,BmalG_01003976::70::100.0::4.4E-11::+,BmalG_01004011::70::100.0::4.4E-11::+,BmalG_01004024::70::100.0::4.4E-11::+,BmalG_01004119::70::100.0::4.4E-11::+,BmalG_01004175::70::100.0::4.4E-11::+,BmalG_01004210::70::100.0::4.4E-11::+,BmalG_01004253::70::100.0::4.4E-11::+,BmalG_01004269::70::100.0::4.4E-11::+,BmalG_01004307::70::100.0::4.4E-11::+,BmalG_01004311::70::100.0::4.4E-11::+,BmalG_01004332::70::100.0::4.4E-11::+,BmalG_01004398::70::100.0::4.4E-11::+,BmalG_01004435::70::100.0::4.4E-11::+,BmalG_01004454::70::100.0::4.4E-11::+,BmalG_01004486::70::100.0::4.4E-11::+,BmalG_01004519::70::100.0::4.4E-11::+,BmalG_01004546::70::100.0::4.4E-11::+,BmalG_01004637::70::100.0::4.4E-11::+,BmalG_01004744::70::100.0::4.4E-11::+,BmalG_01004765::70::100.0::4.4E-11::+ |
BmalG_01002716 |
|
| 2QBM00001_A_20 |
TGATCTCCGTCGTCGCATGTCACGCGTTGCACACGGACGGACGCCGCGCACGGAAACGCATCGATGCGGT |
64.29 |
33 |
109 |
ATCC 23344 |
BMAA1560 |
hypothetical protein |
|
BMAA1560::70::100.0::1.2E-10::+ |
|
|
|
BMAA1560 |
|
| 2QBM00001_A_21 |
CGACACCGCGATCCGCGAATGCGCGCTGCGCCGAATCATCGTCGACTGTCACATTCGGCGATATCCGAAC |
61.43 |
34 |
112 |
1710b |
BURPS1710b_0798 |
hypothetical protein |
|
BMA0017::70::98.57143::6.8E-11::- |
|
BURPS1710b_0798::70::100.0::1.6E-10::+ |
|
BURPS1710b_0798 |
|
| 2QBM00001_A_22 |
TTTACGGAACAGCAAATCATCGGGTTTCTGAAGGAAGCCGAAGCCGGTATGCCGGTCAAGGAACTGTGCA |
51.43 |
30 |
89 |
1710b |
BURPS1710b_3798 |
IS407A, transposase OrfA |
tISRso14a |
BMA3392::70::98.57143::6.8E-11::+,BMA3008::70::98.57143::6.9E-11::+,BMAA0081::70::98.57143::8.1E-11::+,BMAA0415::70::98.57143::8.7E-11::+,BMA0004::70::98.57143::1.4E-10::+,BMA0111::70::98.57143::1.4E-10::+,BMA0132::70::98.57143::1.4E-10::+,BMA0265::70::98.57143::1.4E-10::+,BMA0285::70::98.57143::1.4E-10::+,BMA0322::70::98.57143::1.4E-10::+,BMA0442::70::98.57143::1.4E-10::+,BMA0484::70::98.57143::1.4E-10::+,BMA0496::70::98.57143::1.4E-10::+,BMA0501::70::98.57143::1.4E-10::+,BMA0574::70::98.57143::1.4E-10::+,BMA0585::70::98.57143::1.4E-10::+,BMA0659::70::98.57143::1.4E-10::+,BMA0720::70::98.57143::1.4E-10::+,BMA0758::70::98.57143::1.4E-10::+,BMA0805::70::98.57143::1.4E-10::+,BMA0858::70::98.57143::1.4E-10::+,BMA0898::70::98.57143::1.4E-10::+,BMA0949::70::98.57143::1.4E-10::+,BMA1040::70::98.57143::1.4E-10::+,BMA1078::70::98.57143::1.4E-10::+,BMA1082::70::98.57143::1.4E-10::+,BMA1118::70::98.57143::1.4E-10::+,BMA1204::70::98.57143::1.4E-10::+,BMA1217::70::98.57143::1.4E-10::+,BMA1231::70::98.57143::1.4E-10::+,BMA1256::70::98.57143::1.4E-10::+,BMA1295::70::98.57143::1.4E-10::+,BMA1410::70::98.57143::1.4E-10::+,BMA1479::70::98.57143::1.4E-10::+,BMA1760::70::98.57143::1.4E-10::+,BMA1842::70::98.57143::1.4E-10::+,BMA1953::70::98.57143::1.4E-10::+,BMA1974::70::98.57143::1.4E-10::+,BMA2086::70::98.57143::1.4E-10::+,BMA2198::70::98.57143::1.4E-10::+,BMA2224::70::98.57143::1.4E-10::+,BMA2250::70::98.57143::1.4E-10::+,BMA2269::70::98.57143::1.4E-10::+,BMA2284::70::98.57143::1.4E-10::+,BMA2529::70::98.57143::1.4E-10::+,BMA2565::70::98.57143::1.4E-10::+,BMA2596::70::98.57143::1.4E-10::+,BMA2654::70::98.57143::1.4E-10::+,BMA2688::70::98.57143::1.4E-10::+,BMA2760::70::98.57143::1.4E-10::+,BMA2792::70::98.57143::1.4E-10::+,BMA2835::70::98.57143::1.4E-10::+,BMA2898::70::98.57143::1.4E-10::+,BMA3007::70::98.57143::1.4E-10::+,BMA3025::70::98.57143::1.4E-10::+,BMA3092::70::98.57143::1.4E-10::+,BMA3352::70::98.57143::1.4E-10::+,BMA3393::70::98.57143::1.4E-10::+,BMAA0082::70::98.57143::1.4E-10::+,BMAA0106::70::98.57143::1.4E-10::+,BMAA0175::70::98.57143::1.4E-10::+,BMAA0275::70::98.57143::1.4E-10::+,BMAA0414::70::98.57143::1.4E-10::+,BMAA0437::70::98.57143::1.4E-10::+,BMAA0498::70::98.57143::1.4E-10::+,BMAA0551::70::98.57143::1.4E-10::+,BMAA0556::70::98.57143::1.4E-10::+,BMAA0583::70::98.57143::1.4E-10::+,BMAA0648::70::98.57143::1.4E-10::+,BMAA0725::70::98.57143::1.4E-10::+,BMAA0812::70::98.57143::1.4E-10::+,BMAA0846::70::98.57143::1.4E-10::+,BMAA0870::70::98.57143::1.4E-10::+,BMAA0886::70::98.57143::1.4E-10::+,BMAA0891::70::98.57143::1.4E-10::+,BMAA0917::70::98.57143::1.4E-10::+,BMAA0991::70::98.57143::1.4E-10::+,BMAA1004::70::98.57143::1.4E-10::+,BMAA1024::70::98.57143::1.4E-10::+,BMAA1055::70::98.57143::1.4E-10::+,BMAA1174::70::98.57143::1.4E-10::+,BMAA1226::70::98.57143::1.4E-10::+,BMAA1307::70::98.57143::1.4E-10::+,BMAA1377::70::98.57143::1.4E-10::+,BMAA1411::70::98.57143::1.4E-10::+,BMAA1504::70::98.57143::1.4E-10::+,BMAA1513::70::98.57143::1.4E-10::+,BMAA1645::70::98.57143::1.4E-10::+,BMAA1740::70::98.57143::1.4E-10::+,BMAA1759::70::98.57143::1.4E-10::+,BMAA1788::70::98.57143::1.4E-10::+,BMAA1946::70::98.57143::1.4E-10::+,BMAA2074::70::98.57143::1.4E-10::+,BMAA1173::70::98.57143::1.4E-10::+,BMAA1787::70::98.57143::2.7E-10::+ |
BPSL0091::70::98.57143::1.4E-10::+,BPSL0950::70::98.57143::1.4E-10::+,BPSL1658::70::98.57143::1.4E-10::+,BPSL3116::70::98.57143::1.4E-10::+ |
BURPS1710b_0297::70::100.0::5.5E-11::+,BURPS1710b_3798::70::100.0::1.2E-10::+,BURPS1710b_0313::70::98.57143::1.4E-10::+,BURPS1710b_0782::70::98.57143::1.4E-10::+,BURPS1710b_1720::70::98.57143::1.4E-10::+,BURPS1710b_A0166::70::98.57143::1.4E-10::+,BURPS1710b_A1167::70::98.57143::1.4E-10::+ |
BmalG_01002809::70::98.57143::6.1E-11::+,BmalG_01000036::70::98.57143::1.4E-10::+,BmalG_01000057::70::98.57143::1.4E-10::+,BmalG_01000147::70::98.57143::1.4E-10::+,BmalG_01000243::70::98.57143::1.4E-10::+,BmalG_01000275::70::98.57143::1.4E-10::+,BmalG_01000331::70::98.57143::1.4E-10::+,BmalG_01000392::70::98.57143::1.4E-10::+,BmalG_01000516::70::98.57143::1.4E-10::+,BmalG_01000550::70::98.57143::1.4E-10::+,BmalG_01000594::70::98.57143::1.4E-10::+,BmalG_01000691::70::98.57143::1.4E-10::+,BmalG_01000753::70::98.57143::1.4E-10::+,BmalG_01000782::70::98.57143::1.4E-10::+,BmalG_01000847::70::98.57143::1.4E-10::+,BmalG_01000921::70::98.57143::1.4E-10::+,BmalG_01001188::70::98.57143::1.4E-10::+,BmalG_01001222::70::98.57143::1.4E-10::+,BmalG_01001356::70::98.57143::1.4E-10::+,BmalG_01001447::70::98.57143::1.4E-10::+,BmalG_01001469::70::98.57143::1.4E-10::+,BmalG_01001565::70::98.57143::1.4E-10::+,BmalG_01001628::70::98.57143::1.4E-10::+,BmalG_01001818::70::98.57143::1.4E-10::+,BmalG_01001864::70::98.57143::1.4E-10::+,BmalG_01001904::70::98.57143::1.4E-10::+,BmalG_01002041::70::98.57143::1.4E-10::+,BmalG_01002086::70::98.57143::1.4E-10::+,BmalG_01002142::70::98.57143::1.4E-10::+,BmalG_01002171::70::98.57143::1.4E-10::+,BmalG_01002231::70::98.57143::1.4E-10::+,BmalG_01002241::70::98.57143::1.4E-10::+,BmalG_01002299::70::98.57143::1.4E-10::+,BmalG_01002458::70::98.57143::1.4E-10::+,BmalG_01002625::70::98.57143::1.4E-10::+,BmalG_01002633::70::98.57143::1.4E-10::+,BmalG_01002667::70::98.57143::1.4E-10::+,BmalG_01002670::70::98.57143::1.4E-10::+,BmalG_01002700::70::98.57143::1.4E-10::+,BmalG_01002715::70::98.57143::1.4E-10::+,BmalG_01002761::70::98.57143::1.4E-10::+,BmalG_01002786::70::98.57143::1.4E-10::+,BmalG_01002800::70::98.57143::1.4E-10::+,BmalG_01002827::70::98.57143::1.4E-10::+,BmalG_01002876::70::98.57143::1.4E-10::+,BmalG_01002958::70::98.57143::1.4E-10::+,BmalG_01002982::70::98.57143::1.4E-10::+,BmalG_01003046::70::98.57143::1.4E-10::+,BmalG_01003074::70::98.57143::1.4E-10::+,BmalG_01003103::70::98.57143::1.4E-10::+,BmalG_01003114::70::98.57143::1.4E-10::+,BmalG_01003116::70::98.57143::1.4E-10::+,BmalG_01003135::70::98.57143::1.4E-10::+,BmalG_01003171::70::98.57143::1.4E-10::+,BmalG_01003204::70::98.57143::1.4E-10::+,BmalG_01003246::70::98.57143::1.4E-10::+,BmalG_01003445::70::98.57143::1.4E-10::+,BmalG_01003459::70::98.57143::1.4E-10::+,BmalG_01003463::70::98.57143::1.4E-10::+,BmalG_01003541::70::98.57143::1.4E-10::+,BmalG_01003638::70::98.57143::1.4E-10::+,BmalG_01003740::70::98.57143::1.4E-10::+,BmalG_01003758::70::98.57143::1.4E-10::+,BmalG_01003818::70::98.57143::1.4E-10::+,BmalG_01003868::70::98.57143::1.4E-10::+,BmalG_01003881::70::98.57143::1.4E-10::+,BmalG_01003923::70::98.57143::1.4E-10::+,BmalG_01003975::70::98.57143::1.4E-10::+,BmalG_01004012::70::98.57143::1.4E-10::+,BmalG_01004023::70::98.57143::1.4E-10::+,BmalG_01004120::70::98.57143::1.4E-10::+,BmalG_01004176::70::98.57143::1.4E-10::+,BmalG_01004211::70::98.57143::1.4E-10::+,BmalG_01004252::70::98.57143::1.4E-10::+,BmalG_01004270::70::98.57143::1.4E-10::+,BmalG_01004306::70::98.57143::1.4E-10::+,BmalG_01004312::70::98.57143::1.4E-10::+,BmalG_01004333::70::98.57143::1.4E-10::+,BmalG_01004399::70::98.57143::1.4E-10::+,BmalG_01004434::70::98.57143::1.4E-10::+,BmalG_01004453::70::98.57143::1.4E-10::+,BmalG_01004485::70::98.57143::1.4E-10::+,BmalG_01004518::70::98.57143::1.4E-10::+,BmalG_01004547::70::98.57143::1.4E-10::+,BmalG_01004740::70::98.57143::1.4E-10::+,BmalG_01004743::70::98.57143::1.4E-10::+,BmalG_01004764::70::98.57143::1.4E-10::+,BmalG_01001248::70::98.57143::2.7E-10::+ |
BURPS1710b_3798 |
|
| 2QBM00001_A_23 |
TTCAACGTCACGTATCTGCTCGACGTGCTCGCGAACCTGAAAGTCGACACCGTTCAGGTGAGCCTCGGCG |
58.57 |
30 |
101 |
GB8 horse 4 |
BmalG_01001626 |
COG0592: DNA polymerase sliding clamp subunit (PCNA homolog) |
|
BMA0002::70::100.0::9.8E-11::+ |
BPSL0074::70::98.57143::2.6E-10::+ |
BURPS1710b_0300::70::98.57143::2.6E-10::+ |
BmalG_01001626::70::100.0::9.8E-11::+ |
BmalG_01001626 |
|
| 2QBM00001_A_24 |
GGAATTCGAGGATTTGTTGGCGACGGCGGTTTATATGGGAGGTGGGCCTTCGATGATGTATGCGGCGTGA |
54.29 |
30 |
57 |
GB8 horse 4 |
BmalG_01001630 |
COG0599: Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
|
BMA0006::70::100.0::4.6E-11::+ |
BPSL0589::67::98.50746::5.0E-10::+ |
BURPS1710b_0791::67::98.50746::2.9E-10::+ |
BmalG_01001630::70::100.0::4.6E-11::+ |
BmalG_01001630 |
|
| 2QBM00001_A_3 |
AAGGCTTACATAAATGTGCTAGCTGCTGATTTGGGATCAGAGGGTCGTAGGTTCGAATCCTATCGCTCCG |
48.57 |
29 |
74 |
1710b |
BURPS1710b_1654 |
pseudo |
|
|
|
BURPS1710b_1654::70::100.0::1.9E-10::+ |
|
BURPS1710b_1654 |
|
| 2QBM00001_A_4 |
ATGTTCTCGTTCATCGAGGTGCTGCCGCTCGTGCTGCTCATCCTCGACGCGATGGAGCACCACAGCCTGA |
60.0 |
30 |
118 |
GB8 horse 4 |
BmalG_01003999 |
COG3256: Nitric oxide reductase large subunit |
|
BMAA0799::70::100.0::1.6E-10::+ |
BPSS1450::70::100.0::1.6E-10::+ |
BURPS1710b_A0475::70::100.0::1.2E-10::+,BURPS1710b_A0474::70::100.0::1.5E-10::+ |
BmalG_01003999::70::100.0::1.6E-10::+ |
BmalG_01003999 |
|
| 2QBM00001_A_5 |
TGGCCCTATCGAAGGGGGCAGGTCAGTACCGCGACGAGCAATACTTCTTCCTCAAGATCCGCGCCGCGTT |
60.0 |
29 |
71 |
ATCC 23344 |
BMAA0173 |
ISBma1, transposase, interruption-C; this gene is disrupted by an IS407 element |
|
BMAA0173::70::100.0::1.6E-10::+ |
|
|
|
BMAA0173 |
|
Total number of rows: 10326
Table truncated, full table size 2833 Kbytes.
| Supplementary data files not provided |
|
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|
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