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Platform GPL57 Query DataSets for GPL57
Status Public on Feb 12, 2002
Title y6k_6400
Technology type spotted DNA/cDNA
Distribution non-commercial
Organism Saccharomyces cerevisiae
 
Description Tip Configuration: Standard 4-tip
Columns per Sector: 40
Column Spacing: 210
Row Spacing: 210
 
Submission date Feb 08, 2002
Last update date Jan 18, 2013
Organization Stanford Microarray Database (SMD)
E-mail(s) array@genome.stanford.edu
Phone 650-498-6012
URL http://genome-www5.stanford.edu/
Department Stanford University, School of Medicine
Street address 300 Pasteur Drive
City Stanford
State/province CA
ZIP/Postal code 94305
Country USA
 
Samples (10) GSM887, GSM888, GSM889, GSM890, GSM891, GSM892 
Series (3)
GSE18 Yeast Stress Response
GSE21 snf/swi mutants of S. cerevisiae.
GSE28 Diauxic shift

Data table header descriptions
ID unique spot identifier
ORF spot name
SPOT_ID control
GENE_NAME gene name
CHROMOSOME chromosome number
STRAND genomic DNA strand upon which gene sequence is placed
BEG_COORD beginning coordinate of gene sequence on genomic DNA
END_COORD ending coordinate of gene sequence on genomic DNA
PROCESS gene process
FUNCTION gene function
DS_GENE_1
DS_GENE_2
SECTOR sector of spot print location
SECTORROW sector row of spot print location
SECTORCOL sector column of spot print location
PLATE clone plate number
PROW clone plate row
PCOL clone plate column
FAILED
IS_CONTAMINATED

Data table
ID ORF SPOT_ID GENE_NAME CHROMOSOME STRAND BEG_COORD END_COORD PROCESS FUNCTION DS_GENE_1 DS_GENE_2 SECTOR SECTORROW SECTORCOL PLATE PROW PCOL FAILED IS_CONTAMINATED
1 GENOMIC 1X 1 1 1 1 A 1 1 U
2 GENOMIC 0.5X 1 1 2 1 A 3 1 U
3 GENOMIC 0.25X 1 1 3 1 A 5 1 U
4 EMPTY 1 1 4 1 A 7 1 U
5 PNCA 1 1 5 1 A 9 1 U
6 LAMBDA 1 1 6 1 A 11 1 U
7 POLY DA 1 1 7 1 C 1 1 U
8 SS DNA 1 1 8 1 C 3 1 U
9 EMPTY 1 1 9 1 C 5 1 U
10 EMPTY 1 1 10 1 C 7 1 U
11 EMPTY 1 1 11 1 C 9 1 U
12 EMPTY 1 1 12 1 C 11 1 U
13 YHR007C ERG11 8 C 121676 120084 ergosterol biosynthesis lanosterol 14-alpha-demethylase 1 1 13 1 E 1 1 U
14 YAL051W OAF1 1 W 48564 51752 transcription regulation from Pol I promoter specific RNA polymerase II transcription factor 1 1 14 1 E 3 1 U
15 YAL054C ACS1 1 C 45022 42881 acetate--CoA ligase YAL053W 1 1 15 1 E 5 1 U
16 YAL056W GPE2 1 W 39260 41803 biological_process unknown molecular_function unknown YAL058C-A (KRE20) YAL055W (PEX22) 1 1 16 1 E 7 0 U
17 PRS316 1 1 17 1 E 9 1 U
18 KAN-MX 1 1 18 1 E 11 1 U
19 E. COLI #10 1 1 19 1 G 1 1 U
20 E. COLI #33 1 1 20 1 G 3 1 U

Total number of rows: 6400

Table truncated, full table size 678 Kbytes.






Download family Format
SOFT formatted family file(s) SOFTHelp
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Supplementary data files not provided

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