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Platform GPL3723 Query DataSets for GPL3723
Status Public on May 12, 2006
Title Shirahige S.cerevisiae Tiling1.0F Array
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Saccharomyces cerevisiae
Manufacturer Affymetrix
Manufacture protocol Affymetrix tiling array for cerevisiae whole chromosome, 2micronDNA, and mitochondrial DNA. 5bp resolution chip. Cover Watson strand.
Catalog number Part#520286
 
 
Contributor(s) katou Y, Shirahige K, Itoh T
Submission date May 03, 2006
Last update date Sep 04, 2008
Contact name Katsuhiko Shirahige
E-mail(s) kshirahi@iam.u-tokyo.ac.jp
Phone +81-3-5842-0756
Fax +81-3-5842-0757
URL http://www.iam.u-tokyo.ac.jp/chromosomeinformatics/
Organization name The University of Tokyo
Department Research Center for Epigenetic Disease
Lab Laboratory of Genome Structure and Function
Street address 1-1-1 Yayoi
City Bunkyo-ku
State/province Tokyo
ZIP/Postal code 113-0032
Country Japan
 
Samples (79) GSM108454, GSM108455, GSM108456, GSM108457, GSM108458, GSM108459 
Series (7)
GSE4808 Chromosomal association of the Smc5/6 complex reveals that it functions in differently regulated pathways
GSE8270 Post-replicative formation of cohesion is required for repair and induced by a single DNA break
GSE8661 Displacement and re-accumulation of centromeric cohesin during transient pre-anaphase centromere splitting

Data table header descriptions
ID
RANGE_GB ACCESSION.VERSION
RANGE_START the start position (relative to the RANGE_GB accession)
RANGE_END the end position (relative to the RANGE_GB accession)
RANGE_STRAND +/Watson strand
DESCRIPTION

Data table
ID RANGE_GB RANGE_START RANGE_END RANGE_STRAND DESCRIPTION
MT_700 NC_001224.1 651 750 + Mitochondrion of Saccharomyces cerevisiae
MT_750 NC_001224.1 701 800 + Mitochondrion of Saccharomyces cerevisiae
MT_800 NC_001224.1 751 850 + Mitochondrion of Saccharomyces cerevisiae
MT_850 NC_001224.1 801 900 + Mitochondrion of Saccharomyces cerevisiae
MT_900 NC_001224.1 851 950 + Mitochondrion of Saccharomyces cerevisiae
MT_1000 NC_001224.1 951 1050 + Mitochondrion of Saccharomyces cerevisiae
MT_1050 NC_001224.1 1001 1100 + Mitochondrion of Saccharomyces cerevisiae
MT_1100 NC_001224.1 1051 1150 + Mitochondrion of Saccharomyces cerevisiae
MT_1650 NC_001224.1 1601 1700 + Mitochondrion of Saccharomyces cerevisiae
MT_2300 NC_001224.1 2251 2350 + Mitochondrion of Saccharomyces cerevisiae
MT_2350 NC_001224.1 2301 2400 + Mitochondrion of Saccharomyces cerevisiae
MT_2400 NC_001224.1 2351 2450 + Mitochondrion of Saccharomyces cerevisiae
MT_2450 NC_001224.1 2401 2500 + Mitochondrion of Saccharomyces cerevisiae
MT_2500 NC_001224.1 2451 2550 + Mitochondrion of Saccharomyces cerevisiae
MT_3450 NC_001224.1 3401 3500 + Mitochondrion of Saccharomyces cerevisiae
MT_3500 NC_001224.1 3451 3550 + Mitochondrion of Saccharomyces cerevisiae
MT_3550 NC_001224.1 3501 3600 + Mitochondrion of Saccharomyces cerevisiae
MT_3600 NC_001224.1 3551 3650 + Mitochondrion of Saccharomyces cerevisiae
MT_3650 NC_001224.1 3601 3700 + Mitochondrion of Saccharomyces cerevisiae
MT_3700 NC_001224.1 3651 3750 + Mitochondrion of Saccharomyces cerevisiae

Total number of rows: 227850

Table truncated, full table size 17751 Kbytes.




Download family Format
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Supplementary data files not provided

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