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Platform GPL34356 Query DataSets for GPL34356
Status Public on Jul 16, 2024
Title NanoString nCounter Mouse+HBV viral biosynthesis and liver pathology 90 1.0
Technology type spotted oligonucleotide
Distribution custom-commercial
Organisms Mus musculus; Hepatitis B virus
Manufacturer NanoString
Manufacture protocol Custom built Nanostring probe set designed specifically to look at HBV RNA and genes relevant to viral biosynthesis and liver pathology. See manufacturer's website for more details (http://www.nanostring.com).
 
 
Submission date Apr 03, 2024
Last update date Jul 17, 2024
Contact name Mark Maienschein-Cline
E-mail(s) mmaiensc@uic.edu
Organization name University of Illinois at Chicago
Department Research Resources Center
Lab Center for Research Informatics
Street address 1819 W Polk Ave, Rm 336 M/C 789
City Chicago
State/province IL
ZIP/Postal code 60612
Country USA
 
Samples (35) GSM8186120, GSM8186121, GSM8186122, GSM8186123, GSM8186124, GSM8186125 
Series (2)
GSE263120 Foxa-deficiency Restricts Hepatitis B Virus Biosynthesis Through Epigenic Silencing [NanoSting]
GSE263121 Foxa-deficiency Restricts Hepatitis B Virus Biosynthesis Through Epigenic Silencing

Data table header descriptions
ID
ORF Gene symbol of probe
GB_ACC Accesssion number of probe
Class Name Classification of gene
SPOT_ID
Analyte Type Type of analyte

Data table
ID ORF GB_ACC Class Name SPOT_ID Analyte Type
Abcc6 Abcc6 NM_018795.2 Endogenous mRNA
Acox1 Acox1 NM_015729.2 Endogenous mRNA
Acta1 Acta1 NM_001272041.1 Endogenous mRNA
Acta2 (aSMA) Acta2 (aSMA) NM_007392.2 Endogenous mRNA
Apc Apc NM_007462.3 Endogenous mRNA
Apc ex 14 Apc ex 14 NM_007462.3 Endogenous mRNA
Apob Apob NM_009693.2 Endogenous mRNA
Asl Asl NM_133768.4 Endogenous mRNA
Ass1 Ass1 NM_007494.3 Endogenous mRNA
Axin1 Axin1 NM_001159598.1 Endogenous mRNA
Axin2 Axin2 NM_015732.4 Endogenous mRNA
Cd3g Cd3g NM_009850.2 Endogenous mRNA
Cd4 Cd4 NM_013488.2 Endogenous mRNA
Cd8b Cd8b NM_009858.2 Endogenous mRNA
Cdh1 Cdh1 NM_009864.2 Endogenous mRNA
Col1A1 Col1A1 NM_007742.3 Endogenous mRNA
Ctnnb1 Ctnnb1 NM_007614.3 Endogenous mRNA
Ctnnb1 ex 2-6 Ctnnb1 ex 2-6 NM_007614.3 Endogenous mRNA
Cyp2e1 Cyp2e1 NM_021282.2 Endogenous mRNA
Cyp2f2 Cyp2f2 NM_007817.2 Endogenous mRNA

Total number of rows: 98

Table truncated, full table size 4 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary data files not provided

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