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Status
Public on Jul 16, 2024
Title
NanoString nCounter Mouse+HBV viral biosynthesis and liver pathology 90 1.0
Technology type
spotted oligonucleotide
Distribution
custom-commercial
Organisms
Mus musculus ; Hepatitis B virus
Manufacturer
NanoString
Manufacture protocol
Custom built Nanostring probe set designed specifically to look at HBV RNA and genes relevant to viral biosynthesis and liver pathology. See manufacturer's website for more details (http://www.nanostring.com ).
Submission date
Apr 03, 2024
Last update date
Jul 17, 2024
Contact name
Mark Maienschein-Cline
E-mail(s)
mmaiensc@uic.edu
Organization name
University of Illinois at Chicago
Department
Research Resources Center
Lab
Center for Research Informatics
Street address
1819 W Polk Ave, Rm 336 M/C 789
City
Chicago
State/province
IL
ZIP/Postal code
60612
Country
USA
Samples (35)
GSM8186120 , GSM8186121 , GSM8186122 , GSM8186123 , GSM8186124 , GSM8186125
GSM8186126 ,
GSM8186127 ,
GSM8186128 ,
GSM8186129 ,
GSM8186130 ,
GSM8186131 ,
GSM8186132 ,
GSM8186133 ,
GSM8186134 ,
GSM8186135 ,
GSM8186136 ,
GSM8186137 ,
GSM8186138 ,
GSM8186139 ,
GSM8186140 ,
GSM8186141 ,
GSM8186142 ,
GSM8186143 ,
GSM8186144 ,
GSM8186145 ,
GSM8186146 ,
GSM8186147 ,
GSM8186148 ,
GSM8186149 ,
GSM8186150 ,
GSM8186151 ,
GSM8186152 ,
GSM8186153 ,
GSM8186154
Series (2)
GSE263120
Foxa-deficiency Restricts Hepatitis B Virus Biosynthesis Through Epigenic Silencing [NanoSting]
GSE263121
Foxa-deficiency Restricts Hepatitis B Virus Biosynthesis Through Epigenic Silencing
Data table header descriptions
ID
ORF
Gene symbol of probe
GB_ACC
Accesssion number of probe
Class Name
Classification of gene
SPOT_ID
Analyte Type
Type of analyte
Data table
ID
ORF
GB_ACC
Class Name
SPOT_ID
Analyte Type
Abcc6
Abcc6
NM_018795.2
Endogenous
mRNA
Acox1
Acox1
NM_015729.2
Endogenous
mRNA
Acta1
Acta1
NM_001272041.1
Endogenous
mRNA
Acta2 (aSMA)
Acta2 (aSMA)
NM_007392.2
Endogenous
mRNA
Apc
Apc
NM_007462.3
Endogenous
mRNA
Apc ex 14
Apc ex 14
NM_007462.3
Endogenous
mRNA
Apob
Apob
NM_009693.2
Endogenous
mRNA
Asl
Asl
NM_133768.4
Endogenous
mRNA
Ass1
Ass1
NM_007494.3
Endogenous
mRNA
Axin1
Axin1
NM_001159598.1
Endogenous
mRNA
Axin2
Axin2
NM_015732.4
Endogenous
mRNA
Cd3g
Cd3g
NM_009850.2
Endogenous
mRNA
Cd4
Cd4
NM_013488.2
Endogenous
mRNA
Cd8b
Cd8b
NM_009858.2
Endogenous
mRNA
Cdh1
Cdh1
NM_009864.2
Endogenous
mRNA
Col1A1
Col1A1
NM_007742.3
Endogenous
mRNA
Ctnnb1
Ctnnb1
NM_007614.3
Endogenous
mRNA
Ctnnb1 ex 2-6
Ctnnb1 ex 2-6
NM_007614.3
Endogenous
mRNA
Cyp2e1
Cyp2e1
NM_021282.2
Endogenous
mRNA
Cyp2f2
Cyp2f2
NM_007817.2
Endogenous
mRNA
Total number of rows: 98 Table truncated, full table size 4 Kbytes .
Supplementary data files not provided