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Platform GPL33314 Query DataSets for GPL33314
Status Public on Jun 20, 2023
Title nCounter Nanostring mouse miRNA (NS_M_MIR_V1.5)
Technology type other
Distribution commercial
Organism Mus musculus
Manufacturer Nanostring
Manufacture protocol NS_M_MIR_V1.5
 
Description miRNA expression array
 
Submission date Apr 04, 2023
Last update date Jun 20, 2023
Contact name Raisa Reyes-Castro
E-mail(s) RAReyes2@mdanderson.org
Organization name UT Health MD Anderson Cancer Center
Department Genetics
Lab Swathi Arur
Street address 6767 Bertner Ave
City Houston
State/province Texas
ZIP/Postal code 77030
Country USA
 
Samples (9) GSM7146668, GSM7146670, GSM7146671, GSM7146672, GSM7146674, GSM7146675 
Series (2)
GSE228966 Phosphorylated nuclear DICER1 promotes open chromatin state and gastric cell fate in lung adenocarcinomas [Nanostring]
GSE228968 Phosphorylated nuclear DICER1 promotes open chromatin state and gastric cell fate in lung adenocarcinomas

Data table header descriptions
ID
Probe Name miRNA assayed
Annotation Annotation
SPOT_ID mirBase accesion number
NS Probe ID Nanostring probe ID
Class Name Type of probe assayed including endogenous miRNA, housekeeping gene, negative and positive control probes, ligation control probes, and spikein control probes.
Analyte Type Type of RNA assayed
Species Name organism
Target Sequence Sequence of miRNA

Data table
ID Probe Name Annotation SPOT_ID NS Probe ID Class Name Analyte Type Species Name Target Sequence
4 mmu-let-7a MIMAT0000521 nmiR00001.1:1 Endogenous1 miRNA Mm TGAGGTAGTAGGTTGTATAGTT
5 mmu-let-7b MIMAT0000522 nmiR00002.1:1 Endogenous1 miRNA Mm TGAGGTAGTAGGTTGTGTGGTT
6 mmu-let-7c MIMAT0000523 nmiR00003.1:1 Endogenous1 miRNA Mm TGAGGTAGTAGGTTGTATGGTT
7 mmu-let-7d MIMAT0000383 nmiR00004.1:1 Endogenous1 miRNA Mm AGAGGTAGTAGGTTGCATAGTT
8 mmu-let-7e MIMAT0000524 nmiR00005.1:1 Endogenous1 miRNA Mm TGAGGTAGGAGGTTGTATAGTT
9 mmu-let-7f MIMAT0000525 nmiR00006.1:2 Endogenous1 miRNA Mm TGAGGTAGTAGATTGTATAGTT
10 mmu-let-7g MIMAT0000121 nmiR00007.1:1 Endogenous1 miRNA Mm TGAGGTAGTAGTTTGTACAGTT
11 mmu-let-7i MIMAT0000122 nmiR00008.1:1 Endogenous1 miRNA Mm TGAGGTAGTAGTTTGTGCTGTT
12 mmu-miR-1 MIMAT0000123 nmiR01009.1:1 Endogenous1 miRNA Mm TGGAATGTAAAGAAGTATGTAT
13 mmu-miR-100 MIMAT0000655 nmiR01010.1:1 Endogenous1 miRNA Mm AACCCGTAGATCCGAACTTGTG
14 mmu-miR-101a MIMAT0000133 nmiR01011.1:1 Endogenous1 miRNA Mm TACAGTACTGTGATAACTGAA
15 mmu-miR-101b MIMAT0000616 nmiR01012.1:1 Endogenous1 miRNA Mm TACAGTACTGTGATAGCTGAA
16 mmu-miR-103 MIMAT0000546 nmiR01013.1:1 Endogenous1 miRNA Mm AGCAGCATTGTACAGGGCTATGA
17 mmu-miR-105 MIMAT0004856 nmiR01014.1:1 Endogenous1 miRNA Mm CCAAGTGCTCAGATGCTTGTGGT
18 mmu-miR-106a+mmu-miR-17 MIMAT0000385 nmiR01015.1:1 Endogenous1 miRNA Mm CAAAGTGCTAACAGTGCAGGTAG
19 mmu-miR-106b MIMAT0000386 nmiR01016.1:1 Endogenous1 miRNA Mm TAAAGTGCTGACAGTGCAGAT
20 mmu-miR-107 MIMAT0000647 nmiR01017.1:1 Endogenous1 miRNA Mm AGCAGCATTGTACAGGGCTATCA
21 mmu-miR-10a MIMAT0000648 nmiR01018.1:1 Endogenous1 miRNA Mm TACCCTGTAGATCCGAATTTGTG
22 mmu-miR-10b MIMAT0000208 nmiR01019.1:1 Endogenous1 miRNA Mm TACCCTGTAGAACCGAATTTGTG
23 mmu-miR-1186 MIMAT0005836 nmiR01020.1:1 Endogenous1 miRNA Mm GAGTGCTGGAATTAAAGGCATG

Total number of rows: 626

Table truncated, full table size 55 Kbytes.




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Supplementary data files not provided
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