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Platform GPL26510 Query DataSets for GPL26510
Status Public on Apr 18, 2019
Title Agilent-084825 Bos taurus_ensembl_201704 Microarray (Probe Name Version)
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Bos taurus
Manufacturer Agilent Technologies
Manufacture protocol see manufacturer's web site at http://www.agilent.com/
 
Description Bos taurus GE Array

Arrays of this design have barcodes that begin with 16084825 or 2584825.

Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.

The ID column represents the Agilent Feature Extraction feature number.

Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).

To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.
Target Sequence Source: ensembl88 cdna and ncRNA transcripts
Gene expression array
Product Name :G4858A#84825 (Agilent)
 
Submission date Apr 17, 2019
Last update date Apr 18, 2019
Contact name Chiho Yoshida
E-mail(s) chiho_yoshida@agilent.com
Phone 81 42 660 9921
Organization name Agilent Technologies
Street address Takakura 9-1
City Hachioji
ZIP/Postal code 192-8510
Country Japan
 

Data table header descriptions
ID Agilent Probe Name
SPOT_ID Spot identifier
CONTROL_TYPE Control type
ENSEMBL_ID EnsemblID
ACCESSION_STRING Accession String
CHROMOSOMAL_LOCATION Chromosomal Location=bosTau6:UMD_3.1:Nov2009
SEQUENCE Sequence

Data table
ID SPOT_ID CONTROL_TYPE ENSEMBL_ID ACCESSION_STRING CHROMOSOMAL_LOCATION SEQUENCE
CUST_1_PI435929733 CUST_1_PI435929733 FALSE ENSBTAT00000064726.1 ens|ENSBTAT00000064726.1 unmapped GACACTGTGGCATGCTCACACCACCTCGTCAACGTGGCTGTTGAATAAAGCAGAGTCCTC
CUST_10_PI435929733 CUST_10_PI435929733 FALSE ENSBTAT00000049620.3 ens|ENSBTAT00000049620.3 unmapped AGAAAAGAATATTAAGTATATTGTAAAATAAACAAAAAATAGAACTTATTTTTATTATGG
CUST_100_PI435929733 CUST_100_PI435929733 FALSE ENSBTAT00000054759.2 ens|ENSBTAT00000054759.2 unmapped TAAAATAAGAAGCAGCCAGTGTGCTCTTATTGGCTGCCTTCCAAAGGAGGAACAGATAGG
CUST_1000_PI435929733 CUST_1000_PI435929733 FALSE ENSBTAT00000009405.5 ens|ENSBTAT00000009405.5 unmapped TTCCTGGAGCTGTTTCGTAGGAATTGGTGTAATAAAGACTTGGTGTCCTCTTGGTGCTCT
CUST_10000_PI435929733 CUST_10000_PI435929733 FALSE ENSBTAT00000043893.3 ens|ENSBTAT00000043893.3 unmapped GGTGATGTATGAAGACTGCATGAAAGGCTACAACACTGAATATAAGTTCATGTCAATATA
CUST_10001_PI435929733 CUST_10001_PI435929733 FALSE ENSBTAT00000013386.4 ens|ENSBTAT00000013386.4 unmapped GAGTTGTGTTTAAATTACCTCTTAAGTACATGATCTCTGACTCAGCTGCTATACTTGAAA
CUST_10002_PI435929733 CUST_10002_PI435929733 FALSE ENSBTAT00000057061.2 ens|ENSBTAT00000057061.2 unmapped TAGTCAGGAAGAGGACACGCAGAGTATTGGTCCTAAAGTCCAGCGACAAAGCACTAATTA
CUST_10003_PI435929733 CUST_10003_PI435929733 FALSE ENSBTAT00000006676.5 ens|ENSBTAT00000006676.5 unmapped ATGTCATCAGGTTAAAAGCAACATGTCTGCCAAGCTTATACAATAAAAATAGCTCTGTGA
CUST_10004_PI435929733 CUST_10004_PI435929733 FALSE ENSBTAT00000000569.5 ens|ENSBTAT00000000569.5 unmapped TACTGCTAGCCTGAAAGCCATGAGGATAAAATAAAGTTCAACAAAAGTGCAAAATAAGAC
CUST_10005_PI435929733 CUST_10005_PI435929733 FALSE ENSBTAT00000009616.5 ens|ENSBTAT00000009616.5 unmapped GAACTATAACCTTTGTTATCTGTTGGACTCTGTATGTGTGATTTATAAAGAGTAGCCTTG
CUST_10006_PI435929733 CUST_10006_PI435929733 FALSE ENSBTAT00000031559.4 ens|ENSBTAT00000031559.4 unmapped ATGAGAGTAAATACATACAGAAACTCTATATTGTGGAAGCCTACCAATCAAACACACCTA
CUST_10007_PI435929733 CUST_10007_PI435929733 FALSE ENSBTAT00000024303.5 ens|ENSBTAT00000024303.5 unmapped CCAGCCACAACCAGCGATTTAAAATTAACAGTTATCTTACTTTGAGAAAACCCAATTTCA
CUST_10008_PI435929733 CUST_10008_PI435929733 FALSE ENSBTAT00000010277.5 ens|ENSBTAT00000010277.5 unmapped GGTCCAGGAAATGTACACAAAACTCGACCTGATTTACAGTTTCAAAAACTGTATTGATGA
CUST_10009_PI435929733 CUST_10009_PI435929733 FALSE ENSBTAT00000007708.5 ens|ENSBTAT00000007708.5 unmapped GCTCCCAAATGGAATATTTTCACTTCTAATCCCTGTTTGTCTACAGAACTATCTGAATTT
CUST_1001_PI435929733 CUST_1001_PI435929733 FALSE ENSBTAT00000061276.2 ens|ENSBTAT00000061276.2 unmapped TTCCGTATTTTAATATGAAGAGGACACTCCTTCGTGGTAAGGGATCCCGTCGTTGTCTTG
CUST_10010_PI435929733 CUST_10010_PI435929733 FALSE ENSBTAT00000005510.4 ens|ENSBTAT00000005510.4 unmapped TTCATCGCCTTCGTGGGTTTCGTGGTCTCCATCGCGTCCGTGGCCACCAACTTCCTCCTG
CUST_10011_PI435929733 CUST_10011_PI435929733 FALSE ENSBTAT00000024552.4 ens|ENSBTAT00000024552.4 unmapped TCAAAAAGAAGTATGAAGTAGATTTTCCCAGGGCTGAACAAGATTCAGAAAAGACTGAAG
CUST_10012_PI435929733 CUST_10012_PI435929733 FALSE ENSBTAT00000002463.3 ens|ENSBTAT00000002463.3 unmapped GCACTGCTTCTTTGTACATAGAGATGTTAATATCTTTGGAAGTTTTACAGAACTCAAAGG
CUST_10013_PI435929733 CUST_10013_PI435929733 FALSE ENSBTAT00000063311.1 ens|ENSBTAT00000063311.1 unmapped CCAAATGTTCTCTTTCCTAACTCGACCTACACTAACTTGATCTACATATGTAAGACTCTG
CUST_10014_PI435929733 CUST_10014_PI435929733 FALSE ENSBTAT00000000570.4 ens|ENSBTAT00000000570.4 unmapped AACTTGAGTGGTTTGTCTTTGGAAATAAAAGATCCATCTAGGATGGATTGTCAGATGCTT

Total number of rows: 26046

Table truncated, full table size 4244 Kbytes.




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