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Platform GPL21267 Query DataSets for GPL21267
Status Public on Dec 21, 2015
Title BovineHD BeadChip
Technology type oligonucleotide beads
Distribution commercial
Organism Bos taurus
Manufacturer Illumina, Inc.
Manufacture protocol See manufacturer's website
 
Description 777,000 SNPs
 
Submission date Dec 21, 2015
Last update date Dec 23, 2015
Organization Illumina Inc.
E-mail(s) expression@illumina.com, techsupport@illumina.com
Phone 1 800 809 4566
URL http://www.illumina.com
Street address 9885 Towne Centre Drive
City San Diego
State/province CA
ZIP/Postal code 92121
Country USA
 
Samples (1819) GSM1979842, GSM1979843, GSM1979844, GSM1979845, GSM1979846, GSM1979847 
Series (9)
GSE76305 Zygotes segregate entire parental genomes in distinct blastomere lineages causing cleavage stage chimaerism and mixolpoidy
GSE95358 In vitro procedures exacerbate chromosome instability in early cleavage stage embryos
GSE99620 Recombination map of male germline cell for a single Holstein bull

Data table header descriptions
ID Illumina probe ID
SPOT_ID
IlmnStrand
SNP
AddressA_ID
AlleleA_ProbeSeq
AddressB_ID
AlleleB_ProbeSeq
GenomeBuild
Chr
MapInfo

Data table
ID SPOT_ID IlmnStrand SNP AddressA_ID AlleleA_ProbeSeq AddressB_ID AlleleB_ProbeSeq GenomeBuild Chr MapInfo
ARS-BFGL-BAC-10172 ARS-BFGL-BAC-10172-0_T_F_1511662585 TOP [A/G] 29744436 GGTCCCCAAAGTATGTGGTAGCACTTACTTATGTAAGTCATCACTCAAGT 3 14 6371334
ARS-BFGL-BAC-1020 ARS-BFGL-BAC-1020-0_B_R_1511662870 BOT [T/C] 43711500 GGATTTTCTTCAATGTTGTTTCAGTGGCATCCTTTATTTGACTGGAATAG 3 14 7928189
ARS-BFGL-BAC-10245 ARS-BFGL-BAC-10245-0_B_F_1511658502 BOT [T/C] 19677417 CGCCTTCTGTTTTTCTTCTTCTCTCTTCCTGTTCTCTTTCTCTCTGCCCT 3 14 31819743
ARS-BFGL-BAC-10345 ARS-BFGL-BAC-10345-0_T_F_1511662909 TOP [A/C] 20791343 ACCATTCATTCTATTGCTTTGTGCTTCAAGTACTCCTGCAAATAAACCTA 3 14 6133529
ARS-BFGL-BAC-10365 ARS-BFGL-BAC-10365-0_T_R_1511658265 TOP [A/C] 20611360 CAGACTCACAGCACTAATTTCTCATCTTCTCCCAGCCAATGTTTATTCTC 3 14 27005721
ARS-BFGL-BAC-10591 ARS-BFGL-BAC-10591-0_T_F_1511658099 TOP [A/G] 72684366 AAAAAAGATGTTTATACAGTAATGCTTATTGTAGCACCATTTATAGTAGC 3 14 17544926
ARS-BFGL-BAC-10793 ARS-BFGL-BAC-10793-0_T_R_1511657669 TOP [C/G] 38624429 CTACAAATATCAACATGCAGTATTTGTACCACACTTCACAGTGTTCATAC 25605392 CTACAAATATCAACATGCAGTATTTGTACCACACTTCACAGTGTTCATAG 3 14 29259114
ARS-BFGL-BAC-10867 ARS-BFGL-BAC-10867-0_B_F_1511658130 BOT [G/C] 49662438 TAATATTTTTGATTGATTTATGCTGGAAATTTTCTCTTTGAAATGATCAG 13790385 TAATATTTTTGATTGATTTATGCTGGAAATTTTCTCTTTGAAATGATCAC 3 14 34639444
ARS-BFGL-BAC-10951 ARS-BFGL-BAC-10951-0_B_F_1511658476 BOT [T/G] 24635507 CCCAGACAGCCACTCAGATGTGGGGGCTTTCCTGGCAGGACAGGTCTGTT 3 10 17911906
ARS-BFGL-BAC-10952 ARS-BFGL-BAC-10952-0_T_F_1511658173 TOP [A/G] 21728440 CGCTCCTCACTCAAAACAGGCTATTTTAAGCAAATATTCTTTGGTCTATC 3 10 18882288
ARS-BFGL-BAC-10960 ARS-BFGL-BAC-10960-0_T_F_1511657561 TOP [A/G] 38785342 GTCTGAAAACTCCCGAAAACTCGGGCGCTCTCCCCGCCCCTCCAGCCCTG 3 10 20609250
ARS-BFGL-BAC-10972 ARS-BFGL-BAC-10972-0_B_F_1511657864 BOT [G/C] 56699377 TAGGCCTCTCAGACCTGGATCTAAATTACTTCTCCAGGTACATTCCCCTG 65628329 TAGGCCTCTCAGACCTGGATCTAAATTACTTCTCCAGGTACATTCCCCTC 3 10 20792754
ARS-BFGL-BAC-10975 ARS-BFGL-BAC-10975-0_T_F_1511662923 TOP [A/G] 54806317 TGAGTTGCTATTGAGGCATCCTCTGTCTTCCTAGCGCCTGAGTGCCCTTC 3 10 21225382
ARS-BFGL-BAC-11000 ARS-BFGL-BAC-11000-0_B_F_1511663020 BOT [T/G] 59609403 TAAGTATAACTTAACTGTGAAATGTACAATCACCACATTGAAATCTGAGC 3 10 79252023
ARS-BFGL-BAC-11003 ARS-BFGL-BAC-11003-0_B_F_1511658066 BOT [T/C] 21785433 AAATTCTTAAAGAAATGCCCTCACACTGGGGACGCTGACTGACTGAAATA 3 10 80410977
ARS-BFGL-BAC-11007 ARS-BFGL-BAC-11007-0_B_F_1511658026 BOT [T/C] 50804399 GAGGCATCTAACATGACCAGTCTATTCACTCTCCAGGGTTGACATTTTCC 3 10 80783719
ARS-BFGL-BAC-11025 ARS-BFGL-BAC-11025-0_B_F_1511663050 BOT [T/G] 21698460 CCAAAAACAAGTCTCCATAAGTATTCATTAGAAAATACTTTGGCTCAAAT 3 10 84516867
ARS-BFGL-BAC-11028 ARS-BFGL-BAC-11028-0_T_F_1511657863 TOP [A/G] 72685364 CAATAGGTCAGTGCTTTTCACATAAAACAGAAAAGCATATCTTAAGAATC 3 10 85649939
ARS-BFGL-BAC-11034 ARS-BFGL-BAC-11034-0_T_R_1511658401 TOP [A/G] 33672481 ACACACAGACAGGTCATGACCACAGTGACCACTGGGTTTTCTGGTAAAAA 3 1 12839893
ARS-BFGL-BAC-11044 ARS-BFGL-BAC-11044-0_B_F_1511657582 BOT [T/C] 15694379 AGTGCTCCTTAGTCTCCATGGTACAGTTTACACAGTGGAAAAATATGATT 3 1 12805406

Total number of rows: 777962

Table truncated, full table size 106824 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary file Size Download File type/resource
GPL21267_bovinehd-manifest-b.csv.gz 77.0 Mb (ftp)(http) CSV

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