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Platform GPL21030 Query DataSets for GPL21030
Status Public on Oct 14, 2015
Title [100718_MM9_Refseq_Prom_ChIP] NimbleGen Mouse ChIP-chip 3x720K RefSeq Promoter Arrays (ProbeID version)
Technology type in situ oligonucleotide
Distribution commercial
Organism Mus musculus
Manufacturer NimbleGen
Manufacture protocol http://www.nimblegen.com/products/lit/06584098001_NG_Epigenetics_UGuide_v1p0.pdf
 
Description Format: 3x720K. Source: UCSC. Build: MM9. Probe length: 50-75mer. Median probe spacing: 100bp
Catalog number: 05924413001
 
Submission date Oct 14, 2015
Last update date Oct 14, 2015
Contact name GEO admin
E-mail(s) geo@ncbi.nlm.nih.gov
Organization name NCBI/NLM/NIH
Street address 9000 Rockville Pike
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Samples (9) GSM1908242, GSM1908243, GSM1908244, GSM2431175, GSM2431176, GSM2431177 
Series (3)
GSE74022 Chip-chip from C3H10T1/2 cells with Gli1
GSE74023 Gene expression and Gli1-ChIP in IhhN protein induced cells
GSE92520 Foxp3 DNA binding in HDAC6-KO vs wild type Regulatory T cells
Relations
Alternative to GPL15447

Data table header descriptions
ID ProbeID
SEQ_ID
CHROMOSOME
RANGE_GB GenBank Accession
SPOT_ID
RANGE_START
RANGE_END

Data table
ID SEQ_ID CHROMOSOME RANGE_GB SPOT_ID RANGE_START RANGE_END
CHR10FS100051103 chr10:100051093-100055819 chr10 NC_000076.5 100051103 100051168
CHR10FS100051208 chr10:100051093-100055819 chr10 NC_000076.5 100051208 100051265
CHR10FS100051318 chr10:100051093-100055819 chr10 NC_000076.5 100051318 100051367
CHR10FS100051443 chr10:100051093-100055819 chr10 NC_000076.5 100051443 100051492
CHR10FS100051523 chr10:100051093-100055819 chr10 NC_000076.5 100051523 100051572
CHR10FS100051638 chr10:100051093-100055819 chr10 NC_000076.5 100051638 100051687
CHR10FS100051733 chr10:100051093-100055819 chr10 NC_000076.5 100051733 100051782
CHR10FS100051818 chr10:100051093-100055819 chr10 NC_000076.5 100051818 100051867
CHR10FS100051928 chr10:100051093-100055819 chr10 NC_000076.5 100051928 100051977
CHR10FS100052019 chr10:100051093-100055819 chr10 NC_000076.5 100052019 100052072
CHR10FS100052139 chr10:100051093-100055819 chr10 NC_000076.5 100052139 100052193
CHR10FS100052219 chr10:100051093-100055819 chr10 NC_000076.5 100052219 100052272
CHR10FS100052334 chr10:100051093-100055819 chr10 NC_000076.5 100052334 100052386
CHR10FS100052429 chr10:100051093-100055819 chr10 NC_000076.5 100052429 100052484
CHR10FS100052519 chr10:100051093-100055819 chr10 NC_000076.5 100052519 100052574
CHR10FS100052639 chr10:100051093-100055819 chr10 NC_000076.5 100052639 100052694
CHR10FS100052720 chr10:100051093-100055819 chr10 NC_000076.5 100052720 100052778
CHR10FS100052868 chr10:100051093-100055819 chr10 NC_000076.5 100052868 100052917
CHR10FS100052968 chr10:100051093-100055819 chr10 NC_000076.5 100052968 100053021
CHR10FS100053063 chr10:100051093-100055819 chr10 NC_000076.5 100053063 100053122

Total number of rows: 714900

Table truncated, full table size 54344 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary file Size Download File type/resource
GPL21030_100718_MM9_Refseq_Prom_ChIP.ndf.gz 46.8 Mb (ftp)(http) NDF
GPL21030_100718_MM9_Refseq_Prom_ChIP.pos.gz 6.1 Mb (ftp)(http) POS

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