GEO help: Mouse over screen elements for information.
Status
Public on Jul 22, 2015
Title
Agilent-030493 SurePrint G3 Mouse Exon 4x180K Microarray (Probe Name version)
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Mus musculus Manufacturer
Agilent Technologies
Manufacture protocol
see manufacturer's web site at http://www.agilent.com/
Description
Mouse4x180KExon
Submission date
Jul 22, 2015
Last update date
Jul 22, 2015
Contact name
GEO admin
E-mail(s)
geo@ncbi.nlm.nih.gov Organization name
NCBI/NLM/NIH
Street address
9000 Rockville Pike
City
Bethesda
State/province
MD
ZIP/Postal code
20892
Country
USA
Samples (143)
GSM1831057 , GSM1831058 , GSM1831059 , GSM1831060 , GSM1831061 , GSM1831062
GSM1831063 ,
GSM1831064 ,
GSM1831065 ,
GSM1831066 ,
GSM1831067 ,
GSM1831068 ,
GSM1831069 ,
GSM1831070 ,
GSM1831071 ,
GSM1831072 ,
GSM1831073 ,
GSM1831074 ,
GSM1831075 ,
GSM1831076 ,
GSM1831077 ,
GSM1831078 ,
GSM1831079 ,
GSM1831080 ,
GSM1831081 ,
GSM1831082 ,
GSM1831083 ,
GSM1831084 ,
GSM1831085 ,
GSM1831086 ,
GSM1831087 ,
GSM1831088 ,
GSM1831089 ,
GSM1831090 ,
GSM1831091 ,
GSM1831092 ,
GSM1831093 ,
GSM1831094 ,
GSM1831095 ,
GSM1831096 ,
GSM1831097 ,
GSM1831098 ,
GSM1831099 ,
GSM1831100 ,
GSM1831101 ,
GSM1831102 ,
GSM1831103 ,
GSM1831104 ,
GSM1831105 ,
GSM1831106 ,
GSM1831107 ,
GSM1831108 ,
GSM1831109 ,
GSM1831110 ,
GSM1831111 ,
GSM1831112 ,
GSM1831113 ,
GSM1831114 ,
GSM1831115 ,
GSM1831116 ,
GSM1831117 ,
GSM1831118 ,
GSM1831119 ,
GSM1831120 ,
GSM1831121 ,
GSM1831122 ,
GSM1831123 ,
GSM1831124 ,
GSM1831125 ,
GSM1831126 ,
GSM1831127 ,
GSM1831132 ,
GSM1831134 ,
GSM1831137 ,
GSM1831139 ,
GSM1831141 ,
GSM1831144 ,
GSM1831146 ,
GSM1831147 ,
GSM1831148 ,
GSM1831149 ,
GSM1831150 ,
GSM1831151 ,
GSM1831152 ,
GSM1831153 ,
GSM1831154 ,
GSM1831155 ,
GSM1831156 ,
GSM1831157 ,
GSM1831158 ,
GSM1831159 ,
GSM1831160 ,
GSM1831161 ,
GSM1831162 ,
GSM1831163 ,
GSM1831164 ,
GSM1831165 ,
GSM1831166 ,
GSM1831167 ,
GSM1831168 ,
GSM1831169 ,
GSM1831170 ,
GSM1831171 ,
GSM1831172 ,
GSM1831173 ,
GSM1831174 ,
GSM1831175 ,
GSM1831176 ,
GSM1831177 ,
GSM1831178 ,
GSM1831179 ,
GSM1831180 ,
GSM1831181 ,
GSM1831182 ,
GSM1831183 ,
GSM1831184 ,
GSM1831185 ,
GSM1831186 ,
GSM1831187 ,
GSM1831188 ,
GSM1831189 ,
GSM1831190 ,
GSM1831191 ,
GSM1831192 ,
GSM1831193 ,
GSM1831194 ,
GSM1831195 ,
GSM1831196 ,
GSM1831197 ,
GSM1831198 ,
GSM1831199 ,
GSM1831200 ,
GSM1831201 ,
GSM1831202 ,
GSM1831203 ,
GSM1831204 ,
GSM1831205 ,
GSM1831206 ,
GSM1831207 ,
GSM1831208 ,
GSM1831209 ,
GSM1831210 ,
GSM1831211 Series (1)
GSE71232 Expression quantitative trait loci (eQTL) analysis of mouse lung tumors
Data table header descriptions ID Agilent Probe Name
SPOT_ID NAME; Spot identifier
CONTROL_TYPE Control type
REFSEQ RefSeqAccession
GB_ACC GenBankAccession
LOCUSLINK_ID LocuslinkID
GENE_SYMBOL Gene Symbol
GENE_NAME Gene Name
UNIGENE_ID UnigeneID
ENSEMBL_ID EnsemblID
ACCESSION_STRING Accession String
CHROMOSOMAL_LOCATION Chromosomal Location
CYTOBAND Cytoband
DESCRIPTION Description
GO_ID GoIDs
SEQUENCE Sequence
Data table ID SPOT_ID CONTROL_TYPE REFSEQ GB_ACC LOCUSLINK_ID GENE_SYMBOL GENE_NAME UNIGENE_ID ENSEMBL_ID ACCESSION_STRING CHROMOSOMAL_LOCATION CYTOBAND DESCRIPTION GO_ID SEQUENCE A_51_P100034
A_51_P100034
FALSE
NM_027162
NM_027162
69674
Mif4gd
MIF4G domain containing
Mm.390387
ref|NM_027162|ref|NM_001243586|ref|NM_001243587|ref|NM_001243584
chr11:115469328-115469269
mm|11qE2
Mus musculus MIF4G domain containing (Mif4gd), transcript variant 1, mRNA [NM_027162]
GO:0003723(RNA binding)|GO:0005575(cellular_component)|GO:0005634(nucleus)|GO:0005737(cytoplasm)|GO:0006417(regulation of translation)|GO:0008022(protein C-terminus binding)
GAGACTTTTGTGGAGGAAGCCTGTTTCCTCCAGTCATGAGTGACTGCCTCACCAGGTTGG
A_51_P100174
A_51_P100174
FALSE
NM_008613
NM_008613
17427
Mns1
meiosis-specific nuclear structural protein 1
Mm.387671
ENSMUST00000034746
ref|NM_008613|ens|ENSMUST00000034746|gb|D14849|gb|AK132772
chr9:72306274-72306333
mm|9qD
Mus musculus meiosis-specific nuclear structural protein 1 (Mns1), mRNA [NM_008613]
GO:0005634(nucleus)|GO:0005635(nuclear envelope)|GO:0005882(intermediate filament)|GO:0005930(axoneme)|GO:0007126(meiosis)|GO:0036126(sperm flagellum)|GO:0042802(identical protein binding)|GO:0070986(left/right axis specification)
CTGTTTTACAGTTGGTGACAGTAGGCCCTGGTCTATCTGCATGTTCTAAAACATCCTCCT
A_51_P100208
A_51_P100208
FALSE
NM_177906
NM_177906
330908
Opcml
opioid binding protein/cell adhesion molecule-like
Mm.379474
ENSMUST00000115243
ref|NM_177906|ens|ENSMUST00000115243|gb|AK048730|gb|BC076581
chr9:28731887-28731946
mm|9qA4
Mus musculus opioid binding protein/cell adhesion molecule-like (Opcml), mRNA [NM_177906]
GO:0003674(molecular_function)|GO:0005575(cellular_component)|GO:0008150(biological_process)
TTTGGGTTTTCTTTGGCATAAACCTTATTTCTAGAAATCCTCATGTCCAATTGCTTTCCC
A_51_P100309
A_51_P100309
FALSE
NM_001039652
NM_001039652
18390
Oprm1
opioid receptor, mu 1
Mm.439715
ENSMUST00000092734
ref|NM_001039652|ens|ENSMUST00000092734|ens|ENSMUST00000056385|ens|ENSMUST00000150374
chr10:3516213-3516154
mm|10qA1
Mus musculus opioid receptor, mu 1 (Oprm1), mRNA [NM_001039652]
GO:0001965(G-protein alpha-subunit binding)|GO:0004871(signal transducer activity)|GO:0004930(G-protein coupled receptor activity)|GO:0004979(beta-endorphin receptor activity)|GO:0004985(opioid receptor activity)|GO:0005515(protein binding)|GO:0005737(cytoplasm)|GO:0005886(plasma membrane)|GO:0005925(focal adhesion)|GO:0007165(signal transduction)|GO:0007186(G-protein coupled receptor signaling pathway)|GO:0007191(adenylate cyclase-activating dopamine receptor signaling pathway)|GO:0007193(adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway)|GO:0007204(elevation of cytosolic calcium ion concentration)|GO:0007218(neuropeptide signaling pathway)|GO:0007626(locomotory behavior)|GO:0016020(membrane)|GO:0016021(integral to membrane)|GO:0019233(sensory perception of pain)|GO:0030425(dendrite)|GO:0031005(filamin binding)|GO:0031635(adenylate cyclase-inhibiting opioid receptor signaling pathway)|GO:0031681(G-protein beta-subunit binding)|GO:0032100(positive regulation of appetite)|GO:0032590(dendrite membrane)|GO:0032839(dendrite cytoplasm)|GO:0033554(cellular response to stress)|GO:0038003(opioid receptor signaling pathway)|GO:0038047(morphine receptor activity)|GO:0042383(sarcolemma)|GO:0043204(perikaryon)|GO:0043950(positive regulation of cAMP-mediated signaling)|GO:0043951(negative regulation of cAMP-mediated signaling)|GO:0045019(negative regulation of nitric oxide biosynthetic process)|GO:0045121(membrane raft)|GO:0045429(positive regulation of nitric oxide biosynthetic process)|GO:0045471(response to ethanol)|GO:0048149(behavioral response to ethanol)|GO:0050769(positive regulation of neurogenesis)|GO:0050795(regulation of behavior)|GO:0051481(reduction of cytosolic calcium ion concentration)|GO:0051930(regulation of sensory perception of pain)|GO:0060079(regulation of excitatory postsynaptic membrane potential)|GO:0061358(negative regulation of Wnt protein secretion)|GO:0071315(cellular response to morphine)
GCCTGAACCCAGTTCTTTATGCGTTCCTGGATGAAAACTTCAAACGATGTTTTAGAGAGT
A_51_P100327
A_51_P100327
FALSE
NM_013683
NM_013683
21354
Tap1
transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)
Mm.482076
ENSMUST00000166582
ref|NM_013683|ref|NM_001161730|ens|ENSMUST00000166582|ens|ENSMUST00000041633
chr17:34330854-34330913
mm|17qB1
Mus musculus transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) (Tap1), transcript variant 1, mRNA [NM_013683]
GO:0000166(nucleotide binding)|GO:0001916(positive regulation of T cell mediated cytotoxicity)|GO:0005215(transporter activity)|GO:0005524(ATP binding)|GO:0005576(extracellular region)|GO:0005739(mitochondrion)|GO:0005783(endoplasmic reticulum)|GO:0005886(plasma membrane)|GO:0006200(ATP catabolic process)|GO:0006810(transport)|GO:0006952(defense response)|GO:0015031(protein transport)|GO:0015197(peptide transporter activity)|GO:0015421(oligopeptide-transporting ATPase activity)|GO:0015833(peptide transport)|GO:0016020(membrane)|GO:0016021(integral to membrane)|GO:0016887(ATPase activity)|GO:0017111(nucleoside-triphosphatase activity)|GO:0019060(intracellular transport of viral proteins in host cell)|GO:0019885(antigen processing and presentation of endogenous peptide antigen via MHC class I)|GO:0030176(integral to endoplasmic reticulum membrane)|GO:0035672(oligopeptide transmembrane transport)|GO:0042270(protection from natural killer cell mediated cytotoxicity)|GO:0042288(MHC class I protein binding)|GO:0042605(peptide antigen binding)|GO:0042626(ATPase activity, coupled to transmembrane movement of substances)|GO:0042803(protein homodimerization activity)|GO:0042825(TAP complex)|GO:0043231(intracellular membrane-bounded organelle)|GO:0043531(ADP binding)|GO:0043657(host cell)|GO:0046967(cytosol to ER transport)|GO:0046978(TAP1 binding)|GO:0046979(TAP2 binding)|GO:0046980(tapasin binding)|GO:0046982(protein heterodimerization activity)|GO:0055085(transmembrane transport)
TATTTGGAAGAAGTTTTCGAGAAAATATTGCGTATGGCCTGAACCGGACTCCAACCATGG
A_51_P100537
A_51_P100537
FALSE
NM_175020
NM_175020
232717
Prss58
protease, serine 58
Mm.56997
ENSMUST00000063523
ref|NM_175020|ens|ENSMUST00000063523|gb|AK075754|gb|BC048599
chr6:40845394-40845335
mm|6qB1
Mus musculus protease, serine 58 (Prss58), mRNA [NM_175020]
GO:0003824(catalytic activity)|GO:0004252(serine-type endopeptidase activity)|GO:0005575(cellular_component)|GO:0005576(extracellular region)|GO:0006508(proteolysis)|GO:0008233(peptidase activity)|GO:0008236(serine-type peptidase activity)|GO:0016787(hydrolase activity)
GCCCTGGATTGAAGATACCATGAAAAATAACTGAGCTCCCACAACAGGAGGAATTCTGAA
A_51_P100573
A_51_P100573
FALSE
NM_011947
NM_011947
26406
Map3k3
mitogen-activated protein kinase kinase kinase 3
Mm.27041
ENSMUST00000002044
ref|NM_011947|ens|ENSMUST00000002044|gb|U43187|gb|AK220450
chr11:106015867-106015926
mm|11qE1
Mus musculus mitogen-activated protein kinase kinase kinase 3 (Map3k3), mRNA [NM_011947]
GO:0000166(nucleotide binding)|GO:0004672(protein kinase activity)|GO:0004674(protein serine/threonine kinase activity)|GO:0004709(MAP kinase kinase kinase activity)|GO:0005515(protein binding)|GO:0005524(ATP binding)|GO:0005622(intracellular)|GO:0006468(protein phosphorylation)|GO:0007243(intracellular protein kinase cascade)|GO:0016301(kinase activity)|GO:0016310(phosphorylation)|GO:0016740(transferase activity)|GO:0016772(transferase activity, transferring phosphorus-containing groups)|GO:0046777(protein autophosphorylation)|GO:0046872(metal ion binding)
CAAGGGTATGAATAGTGTTACTTCATTCAGAGTGTTACTTTGTTTCTCTCCCAATGTTTG
A_51_P100624
A_51_P100624
FALSE
NM_029351
NM_029351
75586
Krtap9-3
keratin associated protein 9-3
Mm.75707
ENSMUST00000062683
ref|NM_029351|ens|ENSMUST00000062683|gb|AK009730|gb|AK131927
chr11:99458872-99458813
mm|11qD
Mus musculus keratin associated protein 9-3 (Krtap9-3), mRNA [NM_029351]
GO:0003674(molecular_function)|GO:0005575(cellular_component)|GO:0005882(intermediate filament)|GO:0008150(biological_process)|GO:0045095(keratin filament)
TGATAACTCAGCTATTGACACGGCTACATAATTTCCCAGGAGGTAAATTCATTTGGGGTG
A_51_P100625
A_51_P100625
FALSE
NM_133996
NM_133996
28194
Apon
apolipoprotein N
Mm.439846
ENSMUST00000060782
ref|NM_133996|ens|ENSMUST00000060782|gb|AK083289|gb|BC022137
chr10:127692512-127692571
mm|10qD3
Mus musculus apolipoprotein N (Apon), mRNA [NM_133996]
GO:0003674(molecular_function)|GO:0005615(extracellular space)|GO:0005737(cytoplasm)|GO:0008150(biological_process)
AGCTGAATTCTGGGCCTTGGTTGTATTCATATTGTTTTGGGATATTAAGGAAAGGAAGGT
A_51_P100776
A_51_P100776
FALSE
NM_026450
NM_026450
67911
Zfp169
zinc finger protein 169
Mm.251375
ENSMUST00000110110
ref|NM_026450|ref|NM_001164575|ens|ENSMUST00000110110|ens|ENSMUST00000177530
chr13:48585061-48585002
mm|13qA5
Mus musculus zinc finger protein 169 (Zfp169), transcript variant 1, mRNA [NM_026450]
GO:0003674(molecular_function)|GO:0005575(cellular_component)|GO:0008150(biological_process)|GO:0046872(metal ion binding)
GTACTGAGTGTGGTCGAGCCTTTGAGTTTAAGTCTCTTTTCATCAGACACCAAAAGACAC
A_51_P100787
A_51_P100787
FALSE
NM_025507
NM_025507
66354
Snw1
SNW domain containing 1
Mm.271174
ENSMUST00000021428
ref|NM_025507|ens|ENSMUST00000021428|gb|AX775977|gb|AK009218
chr12:88791047-88790988
mm|12qD2
Mus musculus SNW domain containing 1 (Snw1), mRNA [NM_025507]
GO:0000122(negative regulation of transcription from RNA polymerase II promoter)|GO:0000398(nuclear mRNA splicing, via spliceosome)|GO:0000785(chromatin)|GO:0003713(transcription coactivator activity)|GO:0003714(transcription corepressor activity)|GO:0005112(Notch binding)|GO:0005515(protein binding)|GO:0005634(nucleus)|GO:0005681(spliceosomal complex)|GO:0006351(transcription, DNA-dependent)|GO:0006355(regulation of transcription, DNA-dependent)|GO:0006397(mRNA processing)|GO:0008024(positive transcription elongation factor complex b)|GO:0008380(RNA splicing)|GO:0016363(nuclear matrix)|GO:0030511(positive regulation of transforming growth factor beta receptor signaling pathway)|GO:0035257(nuclear hormone receptor binding)|GO:0035914(skeletal muscle cell differentiation)|GO:0042771(DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis)|GO:0042809(vitamin D receptor binding)|GO:0042974(retinoic acid receptor binding)|GO:0043923(positive regulation by host of viral transcription)|GO:0045892(negative regulation of transcription, DNA-dependent)|GO:0045944(positive regulation of transcription from RNA polymerase II promoter)|GO:0046332(SMAD binding)|GO:0048026(positive regulation of nuclear mRNA splicing, via spliceosome)|GO:0048384(retinoic acid receptor signaling pathway)|GO:0048385(regulation of retinoic acid receptor signaling pathway)|GO:0050769(positive regulation of neurogenesis)|GO:0051571(positive regulation of histone H3-K4 methylation)|GO:0070562(regulation of vitamin D receptor signaling pathway)|GO:0070564(positive regulation of vitamin D receptor signaling pathway)|GO:0071013(catalytic step 2 spliceosome)|GO:0071146(SMAD3-SMAD4 protein complex)|GO:0071300(cellular response to retinoic acid)
CTAATCCAGCTGTAACCTTTTCTGTAAACGTTATGAATAACCTCACCTCAAATGGTGAGT
A_51_P100828
A_51_P100828
FALSE
NM_007452
NM_007452
11757
Prdx3
peroxiredoxin 3
Mm.29821
ENSMUST00000025961
ref|NM_007452|ens|ENSMUST00000025961|gb|BD174090|gb|M28723
chr19:60940207-60940148
mm|19qD3
Mus musculus peroxiredoxin 3 (Prdx3), mRNA [NM_007452]
GO:0001893(maternal placenta development)|GO:0004601(peroxidase activity)|GO:0005737(cytoplasm)|GO:0005739(mitochondrion)|GO:0005769(early endosome)|GO:0006979(response to oxidative stress)|GO:0007005(mitochondrion organization)|GO:0008022(protein C-terminus binding)|GO:0008284(positive regulation of cell proliferation)|GO:0008385(IkappaB kinase complex)|GO:0016209(antioxidant activity)|GO:0016491(oxidoreductase activity)|GO:0019900(kinase binding)|GO:0019901(protein kinase binding)|GO:0030099(myeloid cell differentiation)|GO:0032496(response to lipopolysaccharide)|GO:0033673(negative regulation of kinase activity)|GO:0034614(cellular response to reactive oxygen species)|GO:0042542(response to hydrogen peroxide)|GO:0042744(hydrogen peroxide catabolic process)|GO:0042802(identical protein binding)|GO:0043027(cysteine-type endopeptidase inhibitor activity involved in apoptotic process)|GO:0043066(negative regulation of apoptotic process)|GO:0043154(negative regulation of cysteine-type endopeptidase activity involved in apoptotic process)|GO:0043524(negative regulation of neuron apoptotic process)|GO:0051092(positive regulation of NF-kappaB transcription factor activity)|GO:0051881(regulation of mitochondrial membrane potential)|GO:0051920(peroxiredoxin activity)|GO:0055114(oxidation-reduction process)
GCACATAGCACCAGCACTTAATGGAAGCTTCTGATCAAGGTCCTAAAATTTCCTCTTGAA
A_51_P100852
A_51_P100852
FALSE
NM_175449
NM_175449
215900
Fam26f
family with sequence similarity 26, member F
Mm.34479
ENSMUST00000062784
ref|NM_175449|ens|ENSMUST00000062784|gb|AK153519|gb|AK080048
chr10:33846270-33846211
mm|10qB1
Mus musculus family with sequence similarity 26, member F (Fam26f), mRNA [NM_175449]
GO:0003674(molecular_function)|GO:0005575(cellular_component)|GO:0006810(transport)|GO:0006811(ion transport)|GO:0008150(biological_process)|GO:0016020(membrane)|GO:0016021(integral to membrane)
TGGGAAATCTATTGGGAAAAGGAGAAGCAGATTCTTCAAAATCAAGCTGCAGAGAATGCG
A_51_P100997
A_51_P100997
FALSE
NM_201363
NM_201363
381286
Serpinb3c
serine (or cysteine) peptidase inhibitor, clade B, member 3C
Mm.337362
ENSMUST00000027565
ref|NM_201363|ens|ENSMUST00000027565|gb|AK003650|tc|TC1591158
chr1:109167973-109167914
mm|1qE2.1
Mus musculus serine (or cysteine) peptidase inhibitor, clade B, member 3C (Serpinb3c), mRNA [NM_201363]
GO:0004867(serine-type endopeptidase inhibitor activity)|GO:0005515(protein binding)|GO:0005576(extracellular region)|GO:0010951(negative regulation of endopeptidase activity)|GO:0030162(regulation of proteolysis)
ATTTTAATCTAGGTTCTTCTAATCTAGCATGTATCTGTGCCCTGTGTCAAGTGAGCTAGA
A_51_P101006
A_51_P101006
FALSE
NM_001033874
NM_001033874
68870
Ak8
adenylate kinase 8
Mm.273318
ENSMUST00000074156
ref|NM_001033874|ens|ENSMUST00000074156|gb|AK004439|gb|BC109352
chr2:28668519-28668578
mm|2qA3
Mus musculus adenylate kinase 8 (Ak8), mRNA [NM_001033874]
GO:0000166(nucleotide binding)|GO:0004017(adenylate kinase activity)|GO:0004127(cytidylate kinase activity)|GO:0004550(nucleoside diphosphate kinase activity)|GO:0005524(ATP binding)|GO:0005575(cellular_component)|GO:0005737(cytoplasm)|GO:0006139(nucleobase-containing compound metabolic process)|GO:0006165(nucleoside diphosphate phosphorylation)|GO:0009142(nucleoside triphosphate biosynthetic process)|GO:0016301(kinase activity)|GO:0016310(phosphorylation)|GO:0016740(transferase activity)|GO:0019205(nucleobase-containing compound kinase activity)|GO:0021591(ventricular system development)
CCTATACACAGTTTTTGAGTATATAGAGAGCGGGATCATTAATCCTCTGCCCAGGAAAGT
A_51_P101137
A_51_P101137
FALSE
NM_146025
NM_146025
217125
Samd14
sterile alpha motif domain containing 14
Mm.297199
ENSMUST00000055947
ref|NM_146025|ens|ENSMUST00000055947|gb|AK049753|gb|AK044765
chr11:94887191-94887250
mm|11qD
Mus musculus sterile alpha motif domain containing 14 (Samd14), transcript variant 1, mRNA [NM_146025]
GO:0003674(molecular_function)|GO:0005575(cellular_component)|GO:0008150(biological_process)
CAGGGCCCTATGTTTGTGCTCAGTCACCTTCACTGGAAGAGGGGGCCTCATAGGGAAAAC
A_51_P101196
A_51_P101196
FALSE
NM_011189
NM_011189
19186
Psme1
proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)
Mm.830
ENSMUST00000174148
ref|NM_011189|ens|ENSMUST00000174148|ens|ENSMUST00000173544|ens|ENSMUST00000174259
chr14:56200194-56200253
mm|14qC3
Mus musculus proteasome (prosome, macropain) activator subunit 1 (PA28 alpha) (Psme1), mRNA [NM_011189]
GO:0000502(proteasome complex)|GO:0005515(protein binding)|GO:0008537(proteasome activator complex)|GO:0010950(positive regulation of endopeptidase activity)|GO:0019884(antigen processing and presentation of exogenous antigen)|GO:0061133(endopeptidase activator activity)
AGAAACCAAGGGAATGATCTATTGAGCCCCCTCTCTCATTCTGTGATGGGTATAGCAGAA
A_51_P101228
A_51_P101228
FALSE
NM_198169
NM_198169
229004
Gmeb2
glucocorticoid modulatory element binding protein 2
Mm.220423
ENSMUST00000049032
ref|NM_198169|ens|ENSMUST00000049032|gb|AK129319|gb|BC059066
chr2:180986650-180986591
mm|2qH4
Mus musculus glucocorticoid modulatory element binding protein 2 (Gmeb2), mRNA [NM_198169]
GO:0003674(molecular_function)|GO:0003677(DNA binding)|GO:0003713(transcription coactivator activity)|GO:0005634(nucleus)|GO:0005737(cytoplasm)|GO:0006351(transcription, DNA-dependent)|GO:0006355(regulation of transcription, DNA-dependent)|GO:0008150(biological_process)|GO:0046872(metal ion binding)
AGAGCCATACGAAAATAATTCTCAAATCAGCTTCAGAATTAGTTCATAGCACTCCTTCCC
A_51_P101375
A_51_P101375
FALSE
NM_145933
NM_145933
20440
St6gal1
beta galactoside alpha 2,6 sialyltransferase 1
Mm.149029
ENSMUST00000115335
ref|NM_145933|ref|NM_001252505|ref|NM_001252506|ens|ENSMUST00000115335
chr16:23358405-23358465
mm|16qB1
Mus musculus beta galactoside alpha 2,6 sialyltransferase 1 (St6gal1), transcript variant 1, mRNA [NM_145933]
GO:0003835(beta-galactoside alpha-2,6-sialyltransferase activity)|GO:0005576(extracellular region)|GO:0005794(Golgi apparatus)|GO:0006486(protein glycosylation)|GO:0008373(sialyltransferase activity)|GO:0016020(membrane)|GO:0016021(integral to membrane)|GO:0016740(transferase activity)|GO:0016757(transferase activity, transferring glycosyl groups)|GO:0030173(integral to Golgi membrane)
GAAGCCTACTCAGTTACTCTAGAGTAAAGTTGTTCCCAGGGCAGTCCCTTTTGATCCTTA
A_51_P101460
A_51_P101460
FALSE
NM_023842
NM_023842
109620
Dsp
desmoplakin
Mm.355327
ENSMUST00000124830
ref|NM_023842|gb|AK077574|gb|BC054853|ens|ENSMUST00000124830
chr13:38290121-38290180
mm|13qA3.3
Mus musculus desmoplakin (Dsp), mRNA [NM_023842]
GO:0001533(cornified envelope)|GO:0002934(desmosome organization)|GO:0003223(ventricular compact myocardium morphogenesis)|GO:0005080(protein kinase C binding)|GO:0005198(structural molecule activity)|GO:0005515(protein binding)|GO:0005737(cytoplasm)|GO:0005739(mitochondrion)|GO:0005856(cytoskeleton)|GO:0005882(intermediate filament)|GO:0005886(plasma membrane)|GO:0005911(cell-cell junction)|GO:0005916(fascia adherens)|GO:0014704(intercalated disc)|GO:0016020(membrane)|GO:0016323(basolateral plasma membrane)|GO:0016337(cell-cell adhesion)|GO:0018149(peptide cross-linking)|GO:0030054(cell junction)|GO:0030057(desmosome)|GO:0030216(keratinocyte differentiation)|GO:0030674(protein binding, bridging)|GO:0034332(adherens junction organization)|GO:0043588(skin development)|GO:0045104(intermediate filament cytoskeleton organization)|GO:0045109(intermediate filament organization)|GO:0071896(protein localization to adherens junction)|GO:0086005(regulation of ventricular cardiac muscle cell action potential)|GO:0086069(bundle of His cardiac muscle cell to Purkinje myocyte communication)|GO:0086091(regulation of heart rate by cardiac conduction)|GO:0097110(scaffold protein binding)
AAATTACACTGACTACTGGTGGCTTAGTACTTTATGTTGTCTCTCACCTAAATAGTTCCA
166136 148359 Kbytes .Supplementary data files not provided
Less...
More...