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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Jun 19, 2015 |
| Title |
Illumina NextSeq 500 (Schizosaccharomyces pombe) |
| Technology type |
high-throughput sequencing |
| Distribution |
virtual |
| Organism |
Schizosaccharomyces pombe |
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| Submission date |
Jun 19, 2015 |
| Last update date |
Jul 30, 2018 |
| Contact name |
GEO |
| Country |
USA |
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| Samples (1784)
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GSM1715906, GSM1715907, GSM1715908, GSM1715909, GSM1715910, GSM1715911
GSM1715912, GSM1715913, GSM1715914, GSM1715915, GSM1715916, GSM1715917, GSM1715918, GSM1715919, GSM1974991, GSM1974992, GSM2129726, GSM2129727, GSM2129728, GSM2129729, GSM2253905, GSM2253906, GSM2253907, GSM2253908, GSM2253909, GSM2253910, GSM2253911, GSM2253912, GSM2253913, GSM2253914, GSM2253915, GSM2253916, GSM2253917, GSM2253918, GSM2253919, GSM2253920, GSM2253921, GSM2253922, GSM2253923, GSM2253924, GSM2253925, GSM2253926, GSM2253931, GSM2253932, GSM2253933, GSM2253934, GSM2253935, GSM2253936, GSM2253937, GSM2253938, GSM2253939, GSM2253940, GSM2253941, GSM2253942, GSM2253943, GSM2253944, GSM2253951, GSM2253952, GSM2253953, GSM2253954, GSM2262339, GSM2262340, GSM2262341, GSM2262342, GSM2262343, GSM2262344, GSM2359559, GSM2359560, GSM2359561, GSM2359562, GSM2359563, GSM2359564, GSM2359565, GSM2359566, GSM2359567, GSM2359568, GSM2359569, GSM2359570, GSM2359571, GSM2359572, GSM2359573, GSM2359574, GSM2359575, GSM2359576, GSM2359577, GSM2359578, GSM2359579, GSM2359580, GSM2359581, GSM2359582, GSM2359583, GSM2359584, GSM2359585, GSM2359586, GSM2359587, GSM2359588, GSM2359589, GSM2359590, GSM2359591, GSM2359592, GSM2359593, GSM2359594, GSM2359595, GSM2359596, GSM2359597, GSM2359598, GSM2359599, GSM2359600, GSM2359601, GSM2359602, GSM2359603, GSM2359604, GSM2359605, GSM2359606, GSM2359607, GSM2359608, GSM2359609, GSM2359610, GSM2359611, GSM2359612, GSM2359613, GSM2359614, GSM2359751, GSM2359752, GSM2359753, GSM2359754, GSM2359755, GSM2359756, GSM2359757, GSM2359758, GSM2359759, GSM2359760, GSM2359761, GSM2359762, GSM2359763, GSM2359764, GSM2359765, GSM2359766, GSM2359767, GSM2359768, GSM2359769, GSM2359770, GSM2359771, GSM2359772, GSM2359773, GSM2359774, GSM2462679, GSM2462680, GSM2462681, GSM2462682, GSM2462683, GSM2462684, GSM2462685, GSM2462686, GSM2462687, GSM2462688, GSM2462689, GSM2462690, GSM2462691, GSM2462692, GSM2462693, GSM2462694, GSM2462695, GSM2462696, GSM2462697, GSM2462698, GSM2462699, GSM2462700, GSM2462701, GSM2462702, GSM2462703, GSM2462704, GSM2462705, GSM2462706, GSM2462707, GSM2462708, GSM2462709, GSM2462710, GSM2734380, GSM2734381, GSM2734382, GSM2734383, GSM2734384, GSM2734385, GSM2734386, GSM2734387, GSM2734388, GSM2734389, GSM2734390, GSM2734391, GSM2734392, GSM2734393, GSM2734394, GSM2734395, GSM2734396, GSM2734397, GSM2734398, GSM2734399, GSM2734400, GSM2734401, GSM2734402, GSM2734403, GSM2734404, GSM2734405, GSM2734406, GSM2734407, GSM2734408, GSM2734409, GSM2734410, GSM2734411, GSM2734412, GSM2734413, GSM2734414, GSM2734415, GSM2734416, GSM2734417, GSM2734418, GSM2734419, GSM2735658, GSM2735659, GSM2735660, GSM2735661, GSM2735662, GSM2735663, GSM2735664, GSM2735665, GSM2735666, GSM2735667, GSM2735668, GSM2735669, GSM2735670, GSM2735671, GSM2735672, GSM2735673, GSM2735674, GSM2735675, GSM2741479, GSM2741480, GSM2741481, GSM2741482, GSM2741483, GSM2741484, GSM2741485, GSM2741486, GSM2741487, GSM2741488, GSM2741489, GSM2741490, GSM2741491, GSM2741492, GSM2741493, GSM2741494, GSM2741495, GSM2741496, GSM2741497, GSM2741498, GSM2932712, GSM2932713, GSM2932714, GSM2932715, GSM2932716, GSM2932717, GSM2932718, GSM2932719, GSM2932720, GSM2932721, GSM2932722, GSM2932723, GSM2932724, GSM2932725, GSM2932726, GSM2932727, GSM2976985, GSM2976986, GSM2976987, GSM2976988, GSM2976989, GSM2976990, GSM2976991, GSM2976992, GSM2976993, GSM2976994, GSM3028538, GSM3028540, GSM3028574, GSM3028576, GSM3028578, GSM3028580, GSM3028581, GSM3028582, GSM3028584, GSM3028585, GSM3028586, GSM3028587, GSM3028588, GSM3028590, GSM3028591, GSM3028592, GSM3118777, GSM3118778, GSM3118779, GSM3118780, GSM3118781, GSM3118782, GSM3118783, GSM3118784, GSM3310010, GSM3310011, GSM3310012, GSM3310013, GSM3310014, GSM3310015, GSM3310016, GSM3310017, GSM3310018, GSM3310019, GSM3310020, GSM3310021, GSM3310022, GSM3310023, GSM3310024, GSM3310025, GSM3310026, GSM3310027, GSM3310028, GSM3310029, GSM3310030, GSM3310031, GSM3310032, GSM3310033, GSM3310034, GSM3310035, GSM3310036, GSM3310037, GSM3310038, GSM3310039, GSM3310040, GSM3310041, GSM3310042, GSM3310043, GSM3310044, GSM3310045, GSM3310046, GSM3310047, GSM3310048, GSM3310049, GSM3310050, GSM3310051, GSM3310052, GSM3310053, GSM3310054, GSM3310055, GSM3310056, GSM3310057, GSM3310058, GSM3310059, GSM3310060, GSM3310061, GSM3310062, GSM3310063, GSM3310064, GSM3310065, GSM3310066, GSM3310067, GSM3310068, GSM3310069, GSM3378732, GSM3378733, GSM3378734, GSM3378735, GSM3378736, GSM3378737, GSM3378738, GSM3378739, GSM3378740, GSM3378741, GSM3378742, GSM3378743, GSM3378744, GSM3378745, GSM3496281, GSM3496282, GSM3496283, GSM3496284, GSM3608680, GSM3608681, GSM3748090, GSM3748091, GSM3748092, GSM3748093, GSM3748094, GSM3748095, GSM3748096, GSM3748097, GSM3748098, GSM3748099, GSM3895476, GSM3895477, GSM3895478, GSM3895479, GSM3895483, GSM3895484, GSM3895485, GSM3895486, GSM3895487, GSM3895488, GSM3895489, GSM3990101, GSM3990102, GSM3990103, GSM4099083, GSM4099084, GSM4099085, GSM4099086, GSM4099087, GSM4099088, GSM4107950, GSM4107953, GSM4107954, GSM4107955, GSM4107956, GSM4107957, GSM4107958, GSM4107959, GSM4190278, GSM4190279, GSM4190280, GSM4190281, GSM4190282, GSM4190283, GSM4190284, GSM4190285, GSM4190286, GSM4190287, GSM4190288, GSM4190289, GSM4190290, GSM4190291, GSM4190292, GSM4190293, GSM4190294, GSM4190295, GSM4190296, GSM4190297, GSM4190298, GSM4190299, GSM4190300, GSM4190301, GSM4190302, GSM4190303, GSM4190304, GSM4190305, GSM4210980, GSM4230321, GSM4230322, GSM4230323, GSM4230324, GSM4230325, GSM4230326, GSM4230327, GSM4230328, GSM4230336, GSM4230337, GSM4230338, GSM4230339, GSM4230340, GSM4230341, GSM4230342, GSM4230343, GSM4230344, GSM4230345, GSM4230346, GSM4230347, GSM4230348, GSM4230349, GSM4230350, GSM4230351, GSM4230352, GSM4230353, GSM4230354, GSM4230355, GSM4230356, GSM4230357, GSM4230358, GSM4230359, GSM4230360, GSM4230361, GSM4230362, GSM4230363, GSM4230364, GSM4230365, GSM4230366, GSM4291555, GSM4291556, GSM4291557, GSM4291558, GSM4291559, GSM4291560, GSM4291561, GSM4291562...
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| Series (82)
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| GSE70033 |
The role of PCNA ubiquitylation during unperturbed genome replication in S.pombe |
| GSE76142 |
Divergence of Transcription Regulation and the Function of a Conserved Elongation Factor in Budding and Fission Yeast |
| GSE80524 |
Histone H2B ubiquitylation represses gametogenesis by opposing RSC-Dependent chromatin remodeling at the ste11 master regulator locus |
| GSE84910 |
Nucleosomal signatures impose nucleosome positioning in coding and non-coding sequences in the genome |
| GSE84912 |
The conserved role of the RSC chromatin remodeler in the establishment of nucleosome depleted regions |
| GSE85182 |
Genome-wide analyses reveal widespread roles for Spt5 in sense and antisense transcription |
| GSE85220 |
Micro-C XL: assaying chromosome conformation at length scales from the nucleosome to the entire genome |
| GSE89142 |
Survival in quiescence requires the euchromatic deployment of Clr4/SUV39H by Argonaute-associated small RNAs [ChIP-Seq] |
| GSE89149 |
Survival in quiescence requires the euchromatic deployment of Clr4/SUV39H by Argonaute-associated small RNAs [sRNA-Seq] |
| GSE89151 |
Survival in quiescence requires the euchromatic deployment of Clr4/SUV39H by Argonaute-associated small RNAs |
| GSE93803 |
Genome-wide analyses reveal widespread roles for Spt5 in sense and antisense transcription [ChIP-seq_round2] |
| GSE102308 |
Cdk9 regulates a promoter-proximal checkpoint to modulate RNA Polymerase II elongation rate in fission yeast |
| GSE102376 |
Global fine-tuning of translation by queuosinylation and Dnmt2-dependent tRNA methylation |
| GSE102590 |
A Cdk9-PP1 switch regulates the elongation-termination transition of RNA polymerase II |
| GSE111326 |
Elongation/termination factor exchange mediated by PP1 phosphatase orchestrates trancription termination |
| GSE113747 |
An essential role for dNTP homeostasis following CDKinduced [Pu-seq] |
| GSE115682 |
Cdk9 and H2Bub1 signal to Clr6-CII/Rpd3S to suppress aberrant antisense transcription |
| GSE119604 |
Genome wide map of H3K9me2 in fission yeast Schizosaccharomyces pombe. |
| GSE119605 |
Expression profilings of fission yeast strains |
| GSE123137 |
CPF is required for heterochromatin assembly and gene silencing [ChIP-seq] |
| GSE123138 |
CPF is required for heterochromatin assembly and gene silencing [RNA-seq] |
| GSE123144 |
CPF is required for heterochromatin assembly and gene silencing |
| GSE126583 |
Multiplexed primer extension sequencing: A targeted RNA-seq method that enables high-precision quantitation of mRNA splicing isoforms and rare pre-mRNA splicing intermediates |
| GSE130709 |
Sen1 is required for robust RNA Polymerase III transcription termination |
| GSE135157 |
Cryptic introns in lncRNAs recruit conserved Pir2/ARS2 protein to promote gene repression [ChIP-seq] |
| GSE135158 |
Cryptic introns in lncRNAs recruit conserved Pir2/ARS2 protein to promote gene repression [RIP-seq] |
| GSE135161 |
Cryptic introns in lncRNAs recruit conserved Pir2/ARS2 protein to promote gene repression |
| GSE138088 |
Comparative analysis of global transcriptional profile of Escherichia coli and Schizosaccharomyces pombe in respiratory and fermentative growth: Inferring the evolution of analog circuits of post-transcriptional regulation |
| GSE138436 |
Epigenetic gene silencing by heterochromatin primes fungal resistance |
| GSE140920 |
An RNA Endonuclease-Kinase Complex Required for Spreading and Epigenetic Inheritance of Heterochromatin |
| GSE141676 |
Rapid and Inexpensive Preparation of Genome-Wide Nucleosome Footprints from Model and Non-Model Organisms |
| GSE142487 |
TOR targets RNA elimination machinery to govern facultative heterochromatin assembly and mitosis to meiosis developmental switch [RNA-seq] |
| GSE142488 |
TOR targets an RNA processing network to regulate facultative heterochromatin, developmental gene expression and cell proliferation |
| GSE144591 |
RNA-seq analysis in ssu72 mutant cells [WT_ssu72] |
| GSE144592 |
RNA-seq analysis in ssu72 and hos2 mutant cells |
| GSE144593 |
Genome-wide maps of RNA polymerase II in WT and ssu72 mutant cells [S5_S7_ChIPseq] |
| GSE144603 |
Ssu72 is essential to suppress initiation of cryptic transcription in the 3' end of the RNA polymerase II transcribed regions. |
| GSE148799 |
RNA-seq of Schizosaccharomyces pombe nuclear RNA exosome mutants |
| GSE149187 |
Total poly(A)+ RNA sequencing |
| GSE152375 |
Development of High-throughput 5Pseq and detection of ribosome stalls at termination level in Saccharomyces cerevisiae |
| GSE152383 |
Identification of transcripts simultaneously bound by Mmi1 and Mei2 |
| GSE152621 |
High-resolution quantitative profiling of tRNA abundance and modification status in eukaryotes by mim-tRNAseq |
| GSE153731 |
Replication dynamics of recombination-dependent replication forks: leading and lagging strand synthesis are not coupled |
| GSE161333 |
RNA-seq of temperature sensitive alleles of splicing factors in fission yeast |
| GSE165503 |
Increased expression of Polδ does not alter the canonical replication program in vivo |
| GSE167543 |
Proteome-wide effects of single gene perturbations in a eukaryotic cell |
| GSE171307 |
RNA-seq analysis in WT and rpb1-CTD-S2A strains |
| GSE173837 |
RNA-seq and small RNA-seq in fission yeast CPF mutants that enable small-RNA-mediated epigenetic gene silencing |
| GSE174822 |
A putative cap binding protein and the methyl phosphate capping enzyme Bin3/MePCE function with the Larp7 family member Pof8 in the biogenesis of telomerase |
| GSE179468 |
Functional characterization of the transcription programs underlying phase transition in the BSL3 pathogen Coccidioides immitis |
| GSE182250 |
Cdk1-dependent phosphorylation of Clr4Suv39H controls a histone H3 methylation switch that is essential for gametogenesis |
| GSE184379 |
Local chromatin context dictates the genetic determinants of the heterochromatin spreading reaction. |
| GSE184466 |
Histone deacetylation primes chromatin to preserve epigenetic memory for self-propagation of heterochromatin domains |
| GSE190267 |
Proteasome-dependent truncation of the negative heterochromatin regulator Epe1 mediates antifungal resistance |
| GSE192342 |
Rtf2 is Important for Replication Fork Barrier Activity of RTS1 via Splicing of Rtf1 [Pu-Seq] |
| GSE192344 |
Rtf2 is Important for Replication Fork Barrier Activity of RTS1 via Splicing of Rtf1 |
| GSE192516 |
Rec8 cohesin-mediated loop-axis chromatin architecture is required for meiotic recombination |
| GSE201803 |
Histone deacetylation primes chromatin to preserve epigenetic memory for self-propagation of heterochromatin domain [ChIP-seq] |
| GSE207082 |
The shelterin-dependent recruitment of Stn1-Ten1 ensures replication of hard to replicate subtelomeric regions in fission yeast |
| GSE227182 |
Topoisomerase 1 facilitates nucleosome reassembly at stress genes during recovery [Mnase-seq] |
| GSE227184 |
Topoisomerase 1 facilitates nucleosome reassembly at stress genes during recovery. |
| GSE231618 |
The establishment of HP1-independent heterochromatin reveals an essential role for HP1 proteins in maintaining epigenetic memory |
| GSE235806 |
Mapping the dynamics of epigenetic adaptation during heterochromatin misregulation [ChIP-seq] |
| GSE235808 |
Mapping the dynamics of epigenetic adaptation during heterochromatin misregulation |
| GSE237770 |
Coordination of histone chaperones for parental histone segregation and epigenetic inheritance |
| GSE241013 |
The fork protection complex promotes symmetric histone recycling to maintain heterochromatin [ChIP-Seq] |
| GSE241063 |
The fork protection complex promotes symmetric histone recycling to maintain heterochromatin |
| GSE242353 |
Specialized replication of heterochromatin domains ensures self-templated chromatin assembly and epigenetic inheritance [ChIP-seq] |
| GSE242431 |
Specialized replication of heterochromatin domains ensures self-templated chromatin assembly and epigenetic inheritance |
| GSE244017 |
Uncoupling the distinct functions of HP1 proteins during heterochromatin establishment and maintenance |
| GSE244546 |
DSIF factor Spt5 coordinates transcription, maturation and exoribonucleolysis of RNA polymerase II transcripts |
| GSE248428 |
Identification of a novel, tunable interface in the S.pombe HP1 protein, Swi6, that underpins epigenetic inheritance. |
| GSE249234 |
Proximity-dependent biotinylation map of the RNAPII CTD reveals that the primary role of Serine 2 phosphorylation is in the suppression of pervasive antisense transcription and not in RNA 3’ end processing [ChIP-seq] |
| GSE249236 |
Proximity-dependent biotinylation map of the RNAPII CTD reveals that the primary role of Serine 2 phosphorylation is in the suppression of pervasive antisense transcription and not in RNA 3’ end processing |
| GSE263472 |
Tracking live-cell single-molecule dynamics enables measurements of heterochromatin-associated protein-protein interactions |
| GSE269093 |
PhpNF-Y drives heterochromatic transcription to generate splicing machinery-dependent small RNAs (RNA-Seq) |
| GSE269095 |
PhpNF-Y drives heterochromatic transcription to generate splicing machinery-dependent small RNAs (small RNA-Seq) |
| GSE269096 |
Php|NF-Y transcription factor infiltrates repressive heterochromatin to generate transcripts crucial for spliceosome-dependent small RNA production |
| GSE269243 |
Nucleosome remodeler exclusion by histone deacetylation enforces heterochromatic silencing and epigenetic inheritance |
| GSE269383 |
A replisome-associated parental histone H3-H4 tetramer chaperone required for faithful epigenetic inheritance |
| GSE271512 |
Location of polyadenylation sites within 3’ untranslated regions is linked to biological function in yeast |
| GSE273510 |
DSIF factor Spt5 coordinates transcription, maturation and exoribonucleolysis of RNA polymerase II transcripts. |
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| Supplementary data files not provided |
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