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Platform GPL19163 Query DataSets for GPL19163
Status Public on Sep 09, 2014
Title Agilent-015062 Mouse Dev Gene Expression Microarray (Probe name version)
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Mus musculus
Manufacturer Agilent Technologies
Manufacture protocol see manufacturer's web site at http://www.agilent.com/
 
Description Design Format = 4 X 44K
Build Version = mm9:NCBI37:Jul2007
 
Submission date Sep 08, 2014
Last update date Sep 09, 2014
Contact name GEO admin
E-mail(s) geo@ncbi.nlm.nih.gov
Organization name NCBI/NLM/NIH
Street address 9000 Rockville Pike
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Samples (14) GSM1501564, GSM1501565, GSM1501566, GSM1501567, GSM1501568, GSM1501569 
Series (1)
GSE61282 Transformation of quiescent adult oligodendrocyte precursor cells into malignant glioma through a multi-step reactivation process

Data table header descriptions
ID Agilent Probe name
CONTROL_TYPE Control type
REFSEQ RefSeqAccession
GB_ACC GenBank Accession number
LOCUSLINK_ID LocuslinkID
ORF ORF Name
GENE_NAME Gene Name
UNIGENE_ID UnigeneID
ENSEMBL_ID EnsemblID
ACCESSION_STRING Accession String
CHROMOSOMAL_LOCATION Chromosomal Location
CYTOBAND Cytoband
DESCRIPTION Description
GO_ID GoIDs
SEQUENCE Sequence
SPOT_ID Spot identifier

Data table
ID CONTROL_TYPE REFSEQ GB_ACC LOCUSLINK_ID ORF GENE_NAME UNIGENE_ID ENSEMBL_ID ACCESSION_STRING CHROMOSOMAL_LOCATION CYTOBAND DESCRIPTION GO_ID SEQUENCE SPOT_ID
A_66_P100001 FALSE NM_146379 NM_146379 258377 Olfr654 olfactory receptor 654 Mm.377465 ENSMUST00000098173 ref|NM_146379|ens|ENSMUST00000098173|ref|XM_006507867|gb|BC125556 chr7:111736944-111737003 mm|7qE3 Mus musculus olfactory receptor 654 (Olfr654), mRNA [NM_146379] GO:0004871(signal transducer activity)|GO:0004930(G-protein coupled receptor activity)|GO:0004984(olfactory receptor activity)|GO:0005886(plasma membrane)|GO:0007165(signal transduction)|GO:0007186(G-protein coupled receptor signaling pathway)|GO:0007608(sensory perception of smell)|GO:0016020(membrane)|GO:0016021(integral to membrane)|GO:0050896(response to stimulus)|GO:0050911(detection of chemical stimulus involved in sensory perception of smell) GGGGTAGACATCTCAGCTATTGCCTCATCTTATGCATTAATCCTACGAGCTATCATGCAT
A_66_P100002 FALSE NM_001039485 NM_001039485 667742 Piezo2 piezo-type mechanosensitive ion channel component 2 Mm.158720 ENSMUST00000047480 ref|NM_001039485|ens|ENSMUST00000047480|ref|XM_006526173|ref|XM_006526170 chr18:63224362-63219396 mm|18qE1 Mus musculus piezo-type mechanosensitive ion channel component 2 (Piezo2), mRNA [NM_001039485] GO:0005261(cation channel activity)|GO:0005886(plasma membrane)|GO:0006810(transport)|GO:0006811(ion transport)|GO:0006812(cation transport)|GO:0008381(mechanically-gated ion channel activity)|GO:0016020(membrane)|GO:0016021(integral to membrane)|GO:0034220(ion transmembrane transport)|GO:0042391(regulation of membrane potential) GAGGATGAAGAACCCCCACGGAAGTCAGCATTCCAGTTCGTCTACCAAGCCTGGATTACT
A_66_P100003 FALSE NM_009971 NM_009971 12985 Csf3 colony stimulating factor 3 (granulocyte) Mm.1238 ENSMUST00000038886 ref|NM_009971|ens|ENSMUST00000038886|gb|BC120761|gb|BC120759 chr11:98564500-98564559 mm|11qD Mus musculus colony stimulating factor 3 (granulocyte) (Csf3), mRNA [NM_009971] GO:0005125(cytokine activity)|GO:0005576(extracellular region)|GO:0005615(extracellular space)|GO:0006955(immune response)|GO:0008083(growth factor activity)|GO:0008284(positive regulation of cell proliferation)|GO:0014068(positive regulation of phosphatidylinositol 3-kinase cascade)|GO:0019899(enzyme binding)|GO:0030838(positive regulation of actin filament polymerization)|GO:0030851(granulocyte differentiation)|GO:0032092(positive regulation of protein binding)|GO:0033138(positive regulation of peptidyl-serine phosphorylation)|GO:0042993(positive regulation of transcription factor import into nucleus)|GO:0045944(positive regulation of transcription from RNA polymerase II promoter)|GO:0050731(positive regulation of peptidyl-tyrosine phosphorylation)|GO:0051897(positive regulation of protein kinase B signaling cascade)|GO:0071345(cellular response to cytokine stimulus)|GO:2000251(positive regulation of actin cytoskeleton reorganization) CCTGCTGCTGCTCCAGGCACCCAGTTCTGTGGCAGTACCCCCAAAAAATCAGTGAGCCCT
A_66_P100004 FALSE NM_183294 NM_183294 71091 Cdkl1 cyclin-dependent kinase-like 1 (CDC2-related kinase) Mm.132325 ENSMUST00000021377 ref|NM_183294|ens|ENSMUST00000021377|ref|XM_006516228|ref|XM_006516230 chr12:70847919-70847860 mm|12qC2 Mus musculus cyclin-dependent kinase-like 1 (CDC2-related kinase) (Cdkl1), mRNA [NM_183294] GO:0000166(nucleotide binding)|GO:0004672(protein kinase activity)|GO:0004674(protein serine/threonine kinase activity)|GO:0004693(cyclin-dependent protein kinase activity)|GO:0005524(ATP binding)|GO:0005634(nucleus)|GO:0005737(cytoplasm)|GO:0006468(protein phosphorylation)|GO:0016301(kinase activity)|GO:0016310(phosphorylation)|GO:0016740(transferase activity)|GO:0016772(transferase activity, transferring phosphorus-containing groups) GTTGCCTTGAGTCCTATCTCCTAGGTTGTTTTCAAATCATATTTAAGTATGATTTTAGGC
A_66_P100005 FALSE AK082669 Mm.4606 gb|AK082669|tc|TC1611039|riken|C230081E04|nap|NAP084822-1 chr6:144998889-144998948 mm|6qG3 Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230081E04 product:unclassifiable, full insert sequence. [AK082669] CTTGGCTATAGATGGTGACTGAAACAACAGTAATAAAGAGAAAAATCTGTGCTGTGGTTC
A_66_P100006 FALSE NM_030203 NM_030203 72480 Tspyl4 TSPY-like 4 Mm.21485 ENSMUST00000047935 ref|NM_030203|ens|ENSMUST00000047935|gb|AK028517|gb|AK034070 chr10:34020865-34020924 mm|10qB1 Mus musculus TSPY-like 4 (Tspyl4), mRNA [NM_030203] GO:0003674(molecular_function)|GO:0005575(cellular_component)|GO:0005634(nucleus)|GO:0006334(nucleosome assembly)|GO:0008150(biological_process) AGTGGTTTCCAAAAGACAAATGTAACTGTCCTACTGATATTTCTTGCTGTAGTAAGTAAG
A_66_P100007 FALSE NM_001190466 NM_001190466 59036 Dact1 dapper homolog 1, antagonist of beta-catenin (xenopus) Mm.46662 ENSMUST00000061273 ref|NM_001190466|ref|NM_021532|ens|ENSMUST00000061273|gb|AK077691 chr12:72420623-72420682 mm|12qC3 Mus musculus dapper homolog 1, antagonist of beta-catenin (xenopus) (Dact1), transcript variant 1, mRNA [NM_001190466] GO:0000122(negative regulation of transcription from RNA polymerase II promoter)|GO:0001702(gastrulation with mouth forming second)|GO:0005080(protein kinase C binding)|GO:0005515(protein binding)|GO:0005634(nucleus)|GO:0005737(cytoplasm)|GO:0007275(multicellular organismal development)|GO:0007399(nervous system development)|GO:0008013(beta-catenin binding)|GO:0016055(Wnt receptor signaling pathway)|GO:0030054(cell junction)|GO:0030177(positive regulation of Wnt receptor signaling pathway)|GO:0030178(negative regulation of Wnt receptor signaling pathway)|GO:0030877(beta-catenin destruction complex)|GO:0031647(regulation of protein stability)|GO:0035412(regulation of catenin import into nucleus)|GO:0035413(positive regulation of catenin import into nucleus)|GO:0045202(synapse)|GO:0045600(positive regulation of fat cell differentiation)|GO:0045732(positive regulation of protein catabolic process)|GO:0046329(negative regulation of JNK cascade)|GO:0048598(embryonic morphogenesis)|GO:0048619(embryonic hindgut morphogenesis)|GO:0048813(dendrite morphogenesis)|GO:0050808(synapse organization)|GO:0051018(protein kinase A binding)|GO:0060070(canonical Wnt receptor signaling pathway)|GO:0070097(delta-catenin binding)|GO:0090090(negative regulation of canonical Wnt receptor signaling pathway)|GO:1900107(regulation of nodal signaling pathway)|GO:2000095(regulation of Wnt receptor signaling pathway, planar cell polarity pathway)|GO:2000134(negative regulation of G1/S transition of mitotic cell cycle) TGTAGCCAATACAACTGTTTGTCCCTTAGAGGGCTTGTCTTTGGGATAAAGTGTTGGTCC
A_66_P100008 FALSE NM_172611 NM_172611 223752 Gramd4 GRAM domain containing 4 Mm.24442 ENSMUST00000088931 ref|NM_172611|ref|NM_001205353|ens|ENSMUST00000088931|ens|ENSMUST00000123349 chr15:85955653-85956312 mm|15qE2 Mus musculus GRAM domain containing 4 (Gramd4), transcript variant 1, mRNA [NM_172611] GO:0003674(molecular_function)|GO:0005575(cellular_component)|GO:0005739(mitochondrion)|GO:0006915(apoptotic process)|GO:0008150(biological_process)|GO:0016020(membrane)|GO:0016021(integral to membrane) CAGTAGAGACGGAGGAGCCCCTCAGCGCCCGCAGGTTAACTGAAAACATGAGAAGACTGA
A_66_P100009 FALSE NM_138948 NM_138948 192650 Cabp7 calcium binding protein 7 Mm.207056 ref|NM_138948|gb|AF419324|gb|BC104356|gb|BC104357 chr11:4639583-4639248 mm|11qA1 Mus musculus calcium binding protein 7 (Cabp7), mRNA [NM_138948] GO:0005509(calcium ion binding)|GO:0005737(cytoplasm)|GO:0005794(Golgi apparatus)|GO:0005886(plasma membrane)|GO:0008150(biological_process)|GO:0016020(membrane)|GO:0016021(integral to membrane)|GO:0032588(trans-Golgi network membrane)|GO:0046872(metal ion binding) ACTGACTTTGACACGGTCTTCTGGAAGTGTGACATGCAGAAGCTGACAGTGGATGAGCTG
A_66_P100010 FALSE XM_006528355 XM_006528355 245440 Gm4988 predicted gene 4988 ref|XM_006528355|ref|XM_006544568 chrX:58545601-58545660 mm|XqA6 PREDICTED: Mus musculus predicted gene 4988 (Gm4988), mRNA [XM_006528355] GO:0003674(molecular_function)|GO:0005575(cellular_component)|GO:0008150(biological_process) TCTAAAATATGTACCTAGATTGATTTGATTAATAAAACAGGAAAATGGTAATAAATCCTA
A_66_P100011 FALSE NM_178712 NM_178712 237175 Gpr64 G protein-coupled receptor 64 Mm.213016 ref|NM_178712|ref|NM_001290446|ref|NM_001079857|ref|NM_001290445 chrX:156934451-156934510 mm|XqF4 Mus musculus G protein-coupled receptor 64 (Gpr64), transcript variant 1, mRNA [NM_178712] GO:0004871(signal transducer activity)|GO:0004888(transmembrane signaling receptor activity)|GO:0004930(G-protein coupled receptor activity)|GO:0005886(plasma membrane)|GO:0007165(signal transduction)|GO:0007166(cell surface receptor signaling pathway)|GO:0007186(G-protein coupled receptor signaling pathway)|GO:0007218(neuropeptide signaling pathway)|GO:0016020(membrane)|GO:0016021(integral to membrane)|GO:0016324(apical plasma membrane)|GO:0070062(extracellular vesicular exosome) TGGATGGTGTGAAGTGTCCAGTTTTCCTTTAACACAATGTGAGATGTATGAAAAGCGCTG
A_66_P100012 FALSE NM_001013749 NM_001013749 210573 Tmem151b transmembrane protein 151B Mm.329064 ENSMUST00000180252 ref|NM_001013749|ens|ENSMUST00000180252|ref|XM_006523970|gb|BC083182 chr17:45682153-45682094 mm|17qB3 Mus musculus transmembrane protein 151B (Tmem151b), mRNA [NM_001013749] GO:0003674(molecular_function)|GO:0005575(cellular_component)|GO:0008150(biological_process)|GO:0016020(membrane)|GO:0016021(integral to membrane) TCGTCCATCTTCTCGCGCAGCGCGCTGAGTATCTGCGCCAGCCCGCGGGCTGCCCAGGGC
A_66_P100013 FALSE NM_010480 NM_010480 15519 Hsp90aa1 heat shock protein 90, alpha (cytosolic), class A member 1 Mm.341186 ENSMUST00000129005 ref|NM_010480|ens|ENSMUST00000129005|ens|ENSMUST00000021698|ens|ENSMUST00000094361 chr12:111931315-111931256 mm|12qF1 Mus musculus heat shock protein 90, alpha (cytosolic), class A member 1 (Hsp90aa1), mRNA [NM_010480] GO:0000166(nucleotide binding)|GO:0001764(neuron migration)|GO:0002134(UTP binding)|GO:0002135(CTP binding)|GO:0003729(mRNA binding)|GO:0005515(protein binding)|GO:0005524(ATP binding)|GO:0005525(GTP binding)|GO:0005622(intracellular)|GO:0005634(nucleus)|GO:0005737(cytoplasm)|GO:0005739(mitochondrion)|GO:0005829(cytosol)|GO:0005886(plasma membrane)|GO:0006200(ATP catabolic process)|GO:0006457(protein folding)|GO:0006809(nitric oxide biosynthetic process)|GO:0006950(response to stress)|GO:0006986(response to unfolded protein)|GO:0009986(cell surface)|GO:0010592(positive regulation of lamellipodium assembly)|GO:0016020(membrane)|GO:0016323(basolateral plasma membrane)|GO:0016324(apical plasma membrane)|GO:0016887(ATPase activity)|GO:0017098(sulfonylurea receptor binding)|GO:0019901(protein kinase binding)|GO:0019903(protein phosphatase binding)|GO:0023026(MHC class II protein complex binding)|GO:0030235(nitric-oxide synthase regulator activity)|GO:0030911(TPR domain binding)|GO:0031012(extracellular matrix)|GO:0031526(brush border membrane)|GO:0032564(dATP binding)|GO:0033160(positive regulation of protein import into nucleus, translocation)|GO:0042026(protein refolding)|GO:0042802(identical protein binding)|GO:0042803(protein homodimerization activity)|GO:0043005(neuron projection)|GO:0043025(neuronal cell body)|GO:0043234(protein complex)|GO:0044325(ion channel binding)|GO:0045040(protein import into mitochondrial outer membrane)|GO:0045429(positive regulation of nitric oxide biosynthetic process)|GO:0045585(positive regulation of cytotoxic T cell differentiation)|GO:0045793(positive regulation of cell size)|GO:0048471(perinuclear region of cytoplasm)|GO:0050790(regulation of catalytic activity)|GO:0051082(unfolded protein binding)|GO:0051131(chaperone-mediated protein complex assembly)|GO:0070062(extracellular vesicular exosome) ATCTGCTTCTGGGGACGAGATGGTTTCTCTGAAGGACTACTGTACCAGAATGAAGGAAAA
A_66_P100014 FALSE NM_134023 NM_134023 103724 Tbc1d10a TBC1 domain family, member 10a Mm.28140 ENSMUST00000041042 ref|NM_134023|ens|ENSMUST00000041042|ens|ENSMUST00000180088|ref|XM_006514441 chr11:4115447-4115506 mm|11qA1 Mus musculus TBC1 domain family, member 10a (Tbc1d10a), mRNA [NM_134023] GO:0005085(guanyl-nucleotide exchange factor activity)|GO:0005096(GTPase activator activity)|GO:0005097(Rab GTPase activator activity)|GO:0030165(PDZ domain binding)|GO:0032313(regulation of Rab GTPase activity)|GO:0042995(cell projection)|GO:0045862(positive regulation of proteolysis)|GO:0070062(extracellular vesicular exosome)|GO:0097202(activation of cysteine-type endopeptidase activity) GGGGTACTCTTTGTGTAAAATAGATATATGGTTTTGTACGGAAATAAACAGGCTTGTGTA
A_66_P100015 FALSE NM_153422 NM_153422 242202 Pde5a phosphodiesterase 5A, cGMP-specific Mm.134911 ENSMUST00000066728 ref|NM_153422|ens|ENSMUST00000066728|ref|XM_006501481|gb|AK031275 chr3:122450919-122450978 mm|3qG1 Mus musculus phosphodiesterase 5A, cGMP-specific (Pde5a), mRNA [NM_153422] GO:0000166(nucleotide binding)|GO:0002026(regulation of the force of heart contraction)|GO:0002678(positive regulation of chronic inflammatory response)|GO:0003824(catalytic activity)|GO:0004112(cyclic-nucleotide phosphodiesterase activity)|GO:0004114(3',5'-cyclic-nucleotide phosphodiesterase activity)|GO:0005829(cytosol)|GO:0007165(signal transduction)|GO:0007614(short-term memory)|GO:0008081(phosphoric diester hydrolase activity)|GO:0008152(metabolic process)|GO:0010613(positive regulation of cardiac muscle hypertrophy)|GO:0016787(hydrolase activity)|GO:0030553(cGMP binding)|GO:0042130(negative regulation of T cell proliferation)|GO:0043065(positive regulation of apoptotic process)|GO:0043406(positive regulation of MAP kinase activity)|GO:0045745(positive regulation of G-protein coupled receptor protein signaling pathway)|GO:0045907(positive regulation of vasoconstriction)|GO:0046068(cGMP metabolic process)|GO:0046069(cGMP catabolic process)|GO:0046872(metal ion binding)|GO:0047555(3',5'-cyclic-GMP phosphodiesterase activity)|GO:0055118(negative regulation of cardiac muscle contraction)|GO:0055119(relaxation of cardiac muscle)|GO:0060282(positive regulation of oocyte development) GCAGATAATACCACCCCTGGAGCACCAGCCAGAAAAATATCTGCCTCTGAATTTGACCGA
A_66_P100016 FALSE BE199935 Mm.437901 gb|BE199935 chr1:89024874-89024815 mm|1qD ug55g06.x1 Barstead bowel MPLRB9 Mus musculus cDNA clone IMAGE:1546330 3'. [BE199935] ATGGGCAGGTGCATGTTTGGTCCTCCACAAATTATTGCTGGGATCCTATCTTTTGCTAGG
A_66_P100017 FALSE NM_001033397 NM_001033397 320864 Krt26 keratin 26 Mm.440509 ENSMUST00000100482 ref|NM_001033397|ens|ENSMUST00000100482|ens|ENSMUST00000148770|gb|AK162718 chr11:99190431-99190372 mm|11qD Mus musculus keratin 26 (Krt26), mRNA [NM_001033397] GO:0005198(structural molecule activity)|GO:0005882(intermediate filament)|GO:0008150(biological_process) GATAGATTAATGGAGGTGTGGTTCAGACAAAGGAGAAAGGAGTGTTAGAAACTCAGAGTG
A_66_P100018 FALSE NM_146411 NM_146411 258406 Olfr462 olfactory receptor 462 Mm.377484 ENSMUST00000049743 ref|NM_146411|gb|BC108940|gb|BC108939|ens|ENSMUST00000049743 chr11:87702991-87702932 mm|11qC Mus musculus olfactory receptor 462 (Olfr462), mRNA [NM_146411] GO:0004871(signal transducer activity)|GO:0004930(G-protein coupled receptor activity)|GO:0004984(olfactory receptor activity)|GO:0005886(plasma membrane)|GO:0007165(signal transduction)|GO:0007186(G-protein coupled receptor signaling pathway)|GO:0007608(sensory perception of smell)|GO:0016020(membrane)|GO:0016021(integral to membrane)|GO:0050896(response to stimulus)|GO:0050911(detection of chemical stimulus involved in sensory perception of smell) ATGAACACTCAACACTGTGTAGTACTAGTGGTGACTGCATGGGTTGTGGGATTTGTCCAC
A_66_P100019 FALSE AK044048 320202 Lefty2 left-right determination factor 2 gb|AK044048|riken|A830084B03|nap|NAP082800-1 chr1:182822304-182822245 mm|1qH4 Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched library, clone:A830084B03 product:unclassifiable, full insert sequence. [AK044048] GO:0005125(cytokine activity)|GO:0005160(transforming growth factor beta receptor binding)|GO:0005576(extracellular region)|GO:0005615(extracellular space)|GO:0007275(multicellular organismal development)|GO:0008083(growth factor activity)|GO:0016049(cell growth)|GO:0040007(growth) ACTGGCCCTACTTCTTCTAGCTCCCAGTTTACAACAGCTGGGTCTTGATACTTGGTAAAT
A_66_P100020 FALSE NM_026938 NM_026938 69094 Tmem160 transmembrane protein 160 Mm.29633 ENSMUST00000019302 ref|NM_026938|ens|ENSMUST00000019302|gb|AK088338|gb|AK166985 chr7:17039476-17039535 mm|7qA2 Mus musculus transmembrane protein 160 (Tmem160), mRNA [NM_026938] GO:0003674(molecular_function)|GO:0005739(mitochondrion)|GO:0008150(biological_process)|GO:0016020(membrane)|GO:0016021(integral to membrane) TCTCCTGGTTCCGAAATGGACTTCTGTCATCCGGCATTGGGGTCATCTCCTTCATGCAGA

Total number of rows: 41074

Table truncated, full table size 26560 Kbytes.




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Supplementary file Size Download File type/resource
GPL19163_015062_D_GEO_20140728.txt.gz 7.2 Mb (ftp)(http) TXT

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