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Platform GPL16747 Query DataSets for GPL16747
Status Public on Mar 21, 2013
Title 2006-07-18 Scerevisiae ChIP Stefan Jentsch MPI Biochemistry S.cerevisiae 385K Tiling Array Version 1
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Saccharomyces cerevisiae
Manufacturer NimbleGen
Manufacture protocol http://www.nimblegen.com/support/dna-microarray-support.html
 
Description S.cerevisiae S288C (see e.g. SGD (http://www.yeastgenome.org/))
2006-07-18_Scerevisiae_ChIP_Stefan Jentsch MPI Biochemistry S.cerevisiae 385K Tiling Array 2006-07-18_Scerevisiae_ChIP_Stefan Jentsch MPI Biochemistry S.cerevisiae 385K Tiling Array Version 1.ndf
2006-07-18_Scerevisiae_ChIP_Stefan Jentsch MPI Biochemistry S.cerevisiae 385K Tiling Array Version 1.pos
 
Submission date Mar 04, 2013
Last update date Mar 21, 2013
Contact name Jörg Renkawitz
E-mail(s) renkawit@biochem.mpg.de
Organization name Max Planck Institute of Biochemistry
Department Molecular Cell Biology
Lab Stefan Jentsch
Street address Am Klopferspitz 18
City Martinsried/Munich
ZIP/Postal code 82152
Country Germany
 
Samples (18) GSM1092463, GSM1092464, GSM1092465, GSM1092466, GSM1092467, GSM1092468 
Series (1)
GSE44844 Monitoring Homology Search during DNA Double-Strand Break Repair in vivo

Data table header descriptions
ID
SEQUENCE Sequence of oligo
Chromosome Chromosomal location
RANGE_GB GenBank accession
RANGE_START Chromosomal start position of oligo
LENGTH Oligo length
RANGE_END Chromosomal end position of oligo

Data table
ID SEQUENCE Chromosome RANGE_GB RANGE_START LENGTH RANGE_END
CHR100P000000000_CHR1 CCACACCACACCCACACACCCACACACCACACCACACACCACACCACACC 1 NC_001133.7 1 50 50
CHR100P000000000_CHR10 CCCACACACACACCACACCCACACCCACACACACCACACCCACACACCAC 10 NC_001142.7 1 50 50
CHR100P000000000_CHR11 CACCACACCCACACACCACACCCACACACACACCACACCCACACACCACA 11 NC_001143.7 1 50 50
CHR100P000000000_CHR12 CACACACACACACCACCCACACACCACACCACACACCACACCACACACCA 12 NC_001144.4 1 50 50
CHR100P000000000_CHR13 CCACACACACACCACACCCACACCACACCCACACCCACACCCACACCCAC 13 NC_001145.2 1 50 50
CHR100P000000000_CHR15 ACACCACACCCACACCACACCCACACCCACACACCACACCCACACACACA 15 NC_001147.5 1 50 50
CHR100P000000000_CHR16 AAATAGCCCTCATGTACGTCTCCTCCAAGCCCTGTTGTCTCTTACCCGGA 16 NC_001148.3 1 50 50
CHR100P000000007_CHR14 TCTGACCGAAATTAAAAAAAAAAAATGAAAATGAAACCCTGTTCTTTAGC 14 NC_001146.6 8 50 57
CHR100P000000032_CHR1 CACACACCACACCACACCCACACACACACATCCTAACACTACCCTAACAC 1 NC_001133.7 33 50 82
CHR100P000000032_CHR10 ACCACACCCACACACCACACCCACACCAACTCTCTCTCATCTACCTTTAC 10 NC_001142.7 33 50 82
CHR100P000000032_CHR11 CCACACCCACACACCACACCCACACACCACACCCACTACTCTAACCCTAT 11 NC_001143.7 33 50 82
CHR100P000000032_CHR12 ACACCACACCACACACCACACCACACCCACACACCCACACACACTTTTCA 12 NC_001144.4 33 50 82
CHR100P000000032_CHR13 ACCCACACCCACACCCACACTTTTCACATCTATCTTTACTCTCGCTGTCA 13 NC_001145.2 33 50 82
CHR100P000000032_CHR15 ACCACACCCACACACACACACACACCACACCCACACACACCCACACACCA 15 NC_001147.5 33 50 82
CHR100P000000032_CHR16 TGTTGTCTCTTACCCGGATGTTCAACCAAAAGCTACTTACTACCTTTATT 16 NC_001148.3 33 50 82
CHR100P000000039_CHR14 GAAACCCTGTTCTTTAGCCCTACAGCACTTCTACATAGCCCTAAATAGCC 14 NC_001146.6 40 50 89
CHR100P000000064_CHR1 CTAACACTACCCTAACACAGCCCTAATCTAACCCTGGCCAACCTGTCTCT 1 NC_001133.7 65 50 114
CHR100P000000064_CHR10 TCTCTCATCTACCTTTACTCGCGCTGTCACACCTTACCCGGCTTTCTGAC 10 NC_001142.7 65 50 114
CHR100P000000064_CHR11 CCACTACTCTAACCCTATTCTAATCCAACCCTGATCAACCTGTCTCCAAA 11 NC_001143.7 65 50 114
CHR100P000000064_CHR12 ACCCACACACACTTTTCACATCTACCTCTACTCTCGCTGTCATACCTTAC 12 NC_001144.4 65 50 114

Total number of rows: 378684

Table truncated, full table size 38774 Kbytes.




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