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Status
Public on Sep 07, 2012
Title
Agilent-026806 M. mulatta (Rhesus) Oligo Microarray v2 (Probe Name Version)
Technology type
in situ oligonucleotide
Distribution
commercial
Organism
Macaca mulatta
Manufacturer
Agilent Technologies
Manufacture protocol
see manufacturer's web site at http://www.agilent.com/
Description
M. mulatta (Rhesus) Oligo Microarray v2 Arrays of this design have barcodes that begin with 16026806 or 2526806. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. The ID column represents the Agilent Feature Extraction feature number. Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface). To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.
Submission date
Sep 07, 2012
Last update date
Jan 18, 2013
Organization
Agilent Technologies
E-mail(s)
cag_sales-na@agilent.com
Phone
877-424-4536
URL
http://www.agilent.com
Department
Street address
City
Palo Alto
State/province
CA
ZIP/Postal code
94304
Country
USA
Samples (282)
GSM1238783 , GSM1238784 , GSM1238785 , GSM1238786 , GSM1522536 , GSM1522537
GSM1522538 ,
GSM1522539 ,
GSM1522540 ,
GSM1522541 ,
GSM1522542 ,
GSM1522543 ,
GSM1522544 ,
GSM1522545 ,
GSM1522546 ,
GSM1522547 ,
GSM1522548 ,
GSM1522549 ,
GSM1522550 ,
GSM1631500 ,
GSM1631501 ,
GSM1631502 ,
GSM1631503 ,
GSM1631504 ,
GSM1910549 ,
GSM1910550 ,
GSM1910551 ,
GSM1910552 ,
GSM1910553 ,
GSM1910554 ,
GSM1910555 ,
GSM1910556 ,
GSM1910557 ,
GSM1910558 ,
GSM1910559 ,
GSM1910560 ,
GSM1910561 ,
GSM1910562 ,
GSM1910563 ,
GSM1910564 ,
GSM1910565 ,
GSM1910566 ,
GSM1910567 ,
GSM1910568 ,
GSM1910569 ,
GSM1910570 ,
GSM1910571 ,
GSM1910572 ,
GSM1910573 ,
GSM1910574 ,
GSM1910575 ,
GSM1910576 ,
GSM1910577 ,
GSM1910578 ,
GSM1910579 ,
GSM1910580 ,
GSM1910581 ,
GSM1910582 ,
GSM1910583 ,
GSM1910584 ,
GSM1910585 ,
GSM1910586 ,
GSM1910587 ,
GSM1910588 ,
GSM1910589 ,
GSM1910590 ,
GSM1910591 ,
GSM1910592 ,
GSM1910593 ,
GSM1910594 ,
GSM1910595 ,
GSM1910596 ,
GSM1910597 ,
GSM1910598 ,
GSM1910599 ,
GSM1910600 ,
GSM1910601 ,
GSM1910602 ,
GSM1910603 ,
GSM1910604 ,
GSM1910605 ,
GSM1910606 ,
GSM1910607 ,
GSM1910608 ,
GSM1910609 ,
GSM1910610 ,
GSM1910611 ,
GSM1910612 ,
GSM1910613 ,
GSM1910614 ,
GSM1910615 ,
GSM1910616 ,
GSM1910617 ,
GSM1910618 ,
GSM1910619 ,
GSM1910620 ,
GSM2402701 ,
GSM2402702 ,
GSM2402703 ,
GSM2402704 ,
GSM2402705 ,
GSM2402706 ,
GSM2402707 ,
GSM2402708 ,
GSM2402709 ,
GSM2402710 ,
GSM2402711 ,
GSM2402712 ,
GSM2807502 ,
GSM2807503 ,
GSM2807504 ,
GSM2807505 ,
GSM2807506 ,
GSM2807507 ,
GSM2807508 ,
GSM2807509 ,
GSM3106775 ,
GSM3106776 ,
GSM3106777 ,
GSM3106778 ,
GSM3106779 ,
GSM3106780 ,
GSM3106781 ,
GSM3106782 ,
GSM3106783 ,
GSM3106784 ,
GSM3106785 ,
GSM3106786 ,
GSM3106787 ,
GSM3106788 ,
GSM3106789 ,
GSM3106790 ,
GSM3106791 ,
GSM3106792 ,
GSM3106793 ,
GSM3106794 ,
GSM3106795 ,
GSM3106796 ,
GSM3106797 ,
GSM3106798 ,
GSM3436550 ,
GSM3436551 ,
GSM3436552 ,
GSM3436553 ,
GSM3436554 ,
GSM3436555 ,
GSM3436556 ,
GSM3436557 ,
GSM3436558 ,
GSM3436559 ,
GSM3436560 ,
GSM3436561 ,
GSM3436562 ,
GSM3436563 ,
GSM3436564 ,
GSM3436565 ,
GSM4614515 ,
GSM4614516 ,
GSM4614517 ,
GSM4614518 ,
GSM4614519 ,
GSM4614520 ,
GSM4614521 ,
GSM4614522 ,
GSM4614523 ,
GSM4614524 ,
GSM4614525 ,
GSM4614526 ,
GSM4614527 ,
GSM4614528 ,
GSM4614529 ,
GSM4614530 ,
GSM4614531 ,
GSM4614532 ,
GSM4614533 ,
GSM4614534 ,
GSM4614535 ,
GSM4614536 ,
GSM4614537 ,
GSM4614538 ,
GSM4614539 ,
GSM4614540 ,
GSM4614541 ,
GSM4614542 ,
GSM4614543 ,
GSM4614544 ,
GSM4614545 ,
GSM4614546 ,
GSM4614547 ,
GSM4614548 ,
GSM4614549 ,
GSM4614550 ,
GSM4614551 ,
GSM4614552 ,
GSM4614553 ,
GSM4614554 ,
GSM4614555 ,
GSM4614556 ,
GSM4614557 ,
GSM4614558 ,
GSM4614559 ,
GSM4614560 ,
GSM4614561 ,
GSM4614562 ,
GSM4614563 ,
GSM4614564 ,
GSM4614565 ,
GSM4614566 ,
GSM4614567 ,
GSM4614568 ,
GSM4614569 ,
GSM4614570 ,
GSM4614571 ,
GSM4614572 ,
GSM4614573 ,
GSM4614574 ,
GSM4614575 ,
GSM4614576 ,
GSM4614577 ,
GSM4614578 ,
GSM4614579 ,
GSM4614580 ,
GSM4614581 ,
GSM4614582 ,
GSM4614583 ,
GSM4614584 ,
GSM4614585 ,
GSM4614586 ,
GSM4614587 ,
GSM4614588 ,
GSM4614589 ,
GSM4614590 ,
GSM4614591 ,
GSM4614592 ,
GSM4614593 ,
GSM4614594 ,
GSM4614595 ,
GSM4614596 ,
GSM4614597 ,
GSM4614598 ,
GSM4614599 ,
GSM4614600 ,
GSM4614601 ,
GSM4614602 ,
GSM4614603 ,
GSM4614604 ,
GSM4614605 ,
GSM4614606 ,
GSM4614607 ,
GSM4614608 ,
GSM4614609 ,
GSM4614610 ,
GSM4614611 ,
GSM4614612 ,
GSM4614613 ,
GSM4614614 ,
GSM4614615 ,
GSM4614616 ,
GSM4614617 ,
GSM4614618 ,
GSM4614619 ,
GSM4614620 ,
GSM4614621 ,
GSM4614622 ,
GSM4614623 ,
GSM4614624 ,
GSM4614625 ,
GSM4614626 ,
GSM4614627 ,
GSM4614628 ,
GSM4614629 ,
GSM4614630 ,
GSM4614631 ,
GSM4614632 ,
GSM4614633 ,
GSM4614634 ,
GSM4614635 ,
GSM4614636 ,
GSM4614637 ,
GSM4614638 ,
GSM4614639 ,
GSM4614640
Series (13)
GSE51103
The Gene Expression Profile of Peripheral Blood Mononuclear Cells from EV71-Infected Rhesus Neonates
GSE62209
Gene Expression Analysis of Host Immune Responses in rhesus macaques infected with SIVmac239 or deglycosylated live-attenuated SIV
GSE66757
The Gene Expression Profile of Peripheral Blood Mononuclear Cells from CA16-Infected Rhesus Neonates
GSE74107
Gene Expression Profiling in Non-Human Primate Jejunum after Total-Body Irradiation
GSE74108
Gene Expression Profiling in Non-Human Primate Colon after Total-Body Irradiation
GSE74109
Gene Expression Profiling in Non-Human Primate Ileum after Total-Body Irradiation
GSE74110
Gene Expression Profiling in Non-Human Primate Jejunum, Ileum and Colon after Total-Body Irradiation
GSE90481
Gene expression signatures for Hib conjugate vaccine
GSE104771
MicroRNA-130a and miR-212 disrupt the intestinal epithelial barrier through modulation of peroxisome proliferator-activated receptor gamma and occludin expression in chronic SIV-infected rhesus macaques
GSE113478
NHP gene expression after 4 Gy total body irradiation.
GSE121439
Cannabinoid attenuation of intestinal inflammation in chronic simian immunodeficiency virus (SIV)-infected rhesus macaques involves differential modulation of pro-inflammatory microRNA/gene expression and T-cell activation
GSE121441
Cannabinoid attenuation of intestinal inflammation in chronic SIV-infected rhesus macaques involves differential modulation of pro-inflammatory microRNA/gene expression and T-cell activation
GSE152406
Pathogenesis of influenza A(H7N9) virus in aged non-human primates
Relations
Alternative to
GPL16026
Data table header descriptions
ID
SPOT_ID
Spot identifier
CONTROL_TYPE
Control type
REFSEQ
RefSeqAccession
GB_ACC
GenBank accession
LOCUSLINK_ID
LocuslinkID
GENE_SYMBOL
Gene Symbol
GENE_NAME
Gene Name
UNIGENE_ID
UnigeneID
ENSEMBL_ID
EnsemblID
ACCESSION_STRING
Accession String
CHROMOSOMAL_LOCATION
Chromosomal Location
DESCRIPTION
Description
SEQUENCE
Sequence
Data table
ID
SPOT_ID
CONTROL_TYPE
REFSEQ
GB_ACC
LOCUSLINK_ID
GENE_SYMBOL
GENE_NAME
UNIGENE_ID
ENSEMBL_ID
ACCESSION_STRING
CHROMOSOMAL_LOCATION
DESCRIPTION
SEQUENCE
A_01_P000001
A_01_P000001
FALSE
XM_001103444
704781
MEP1A
"meprin A, alpha (PABA peptide hydrolase)"
Mmu.9720
gb|XM_001103444
chr4:46665254-46665313
"PREDICTED: Macaca mulatta meprin A, alpha (PABA peptide hydrolase) (MEP1A), mRNA [XM_001103444]"
AGCAGCACCTCCTCCATGCAGGCCTTATTTTCCCATGGTCAGTGCAGTTTGGGGCAGCTT
A_01_P000002
A_01_P000002
FALSE
chr5:080630462-080630521
AGTATGGTGAGTGCCAAAACAGAGTTATGAACACGATATCTATCTGGAAGCACTGAGAAG
A_01_P000003
A_01_P000003
FALSE
NM_001168609
NM_001168609
704662
CAPZA2
"capping protein (actin filament) muscle Z-line, alpha 2"
Mmu.173
ref|NM_001168609|gb|JU477402|gb|JU336588
chr3:154247892-154247951
"Macaca mulatta capping protein (actin filament) muscle Z-line, alpha 2 (CAPZA2), mRNA [NM_001168609]"
GGTTTCATTCAATAGAGTATTGCTTATTATACTTGAGTGGAATCCTTTCCTCACATACTC
A_01_P000004
A_01_P000004
FALSE
JU337169
gb|JU337169|gb|JU337170|gb|JU337168|gb|JU350776
chr15:78064016-78064075
TSA: Macaca mulatta Mamu_506086 mRNA sequence. [JU337169]
TGCTGCACAAAAGCAGATACTTGAGGAAAACACTATTTCCAAAAGCACGTGTATTGACAA
A_01_P000005
A_01_P000005
FALSE
chr19:006272179-006272238
TTGAGGAACTTTTAATTTGCAAGGGTGCCCCCTATGGATGGGGCATTCCAGCTGAGACAC
A_01_P000006
A_01_P000006
FALSE
ENSMMUT00000005571
ens|ENSMMUT00000005571
chr10:56888885-56888826
GTCTGCGGTTTTATGACTTGGCATTTTAGAAACTCCTCATTGTCCAGGTTCCTCATGTAG
A_01_P000010
A_01_P000010
FALSE
JV051555
707872
CNGA3
cyclic nucleotide gated channel alpha 3
ENSMMUT00000029814
ens|ENSMMUT00000029814|gb|JV051555|gb|JU338699
chr13:98290363-98290422
TSA: Macaca mulatta Mamu_527983 mRNA sequence. [JU338699]
AGCAACGTACAGGGAGAGCCTTTTAGATTGAAGGCTGGAGTGGTGTCCTAAACCAAAAAA
A_01_P000011
A_01_P000011
FALSE
XM_001094251
XM_001094251
Mmu.4531
gb|JU485823|gb|JV059993|gb|XM_001094016|ref|XM_001094251
chr11:103587190-103587131
TSA: Macaca mulatta Mamu_377566 mRNA sequence. [JU485823]
AATTTCCCCTGCTACTTTGAAACCAGAAAATAATGACTGGCCATTCATTATATCTGTCTT
A_01_P000012
A_01_P000012
FALSE
XM_001118474
XM_001118474
722313
LOC722313
barH-like 1 homeobox protein-like
ENSMMUT00000006487
ens|ENSMMUT00000006487|ref|XM_001118474
chr15:6052815-6052756
"PREDICTED: Macaca mulatta barH-like 1 homeobox protein-like (LOC722313), mRNA [XM_001118474]"
CAACCTGAACCCCGGCGCGGCGCTCTACCTGTACCGCGGCCCCAGCGCGCCGCCGCCCGC
A_01_P000013
A_01_P000013
FALSE
JV055251
701783
SLC4A1AP
"solute carrier family 4 (anion exchanger), member 1, adaptor protein"
Mmu.14370
ENSMMUT00000027755
ens|ENSMMUT00000027755|ens|ENSMMUT00000043658|gb|JV055251|gb|JU482814
chr13:27675776-27675835
TSA: Macaca mulatta Mamu_362137 mRNA sequence. [JU482814]
TGGTGACTGGCCTTTCCTTCTGTGTTCTTGGCTTCCTAAATTTATCTGCCCATATGATTC
A_01_P000017
A_01_P000017
FALSE
JV056871
705802
ZDHHC20
"zinc finger, DHHC-type containing 20"
Mmu.18098
ENSMMUT00000010310
ens|ENSMMUT00000010310|gb|JV056871|gb|JU333793|gb|JU475028
chr17:2005334-2005275
TSA: Macaca mulatta Mamu_523113 mRNA sequence. [JU333793]
TAAAAAAGAAGCTTTGTACAGTCCTGGGATCCACAGACGCACTGCTCCAGAGCGGAACGA
A_01_P000018
A_01_P000018
FALSE
JU471134
714092
ATG16L1
ATG16 autophagy related 16-like 1 (S. cerevisiae)
ENSMMUT00000032865
ens|ENSMMUT00000032865|ens|ENSMMUT00000032859|ens|ENSMMUT00000032861|ens|ENSMMUT00000032863
chr12:97182605-97182664
TCACGGGCCAGGGCACATCTTTTATTTATTTCGTTATGTTGCCCAACAGAACTTGATTGT
A_01_P000020
A_01_P000020
FALSE
JU475178
718197
LOC718197
ly6/PLAUR domain-containing protein 3-like
Mmu.1278
ENSMMUT00000045066
ens|ENSMMUT00000045066|ens|ENSMMUT00000024980|gb|JU475178|gb|XM_001102229
unmapped
TSA: Macaca mulatta Mamu_378789 mRNA sequence. [JU475178]
ACCGTGCCTTATGCCTGTGTGTGATCAGTTTCTGGCACACAGATGCCTCAATAAAGATTT
A_01_P000023
A_01_P000023
FALSE
NM_001194236
NM_001194236
712971
MED31
mediator complex subunit 31
Mmu.18453
ENSMMUT00000005363
ref|NM_001194236|ens|ENSMMUT00000005363|gb|JU475797
chr16:6360597-6360538
"Macaca mulatta mediator complex subunit 31 (MED31), mRNA [NM_001194236]"
GGCAGGACAACTAGTGGTTAATTACTAATTGGACTCTTGACTTTAGAACAAACATGAGGA
A_01_P000024
A_01_P000024
FALSE
JV043934
706690
GPBP1L1
GC-rich promoter binding protein 1-like 1
Mmu.12403
ENSMMUT00000002774
ens|ENSMMUT00000002774|gb|JV043934|gb|JU471282|gb|JU471284
chr1:48534918-48534859
TSA: Macaca mulatta Mamu_367343 mRNA sequence. [JU471282]
GGGGGGAAATGTGAATTCAGACACAACTGTTCTCTTTTTAGCAGATACTTTTTTGATGCA
A_01_P000028
A_01_P000028
FALSE
chr20:056757809-056757868
ATGATGGACTTTGTACATGAATATGTTCTGTACAAGTACTCTTTCTGTCACTAGTACTAC
A_01_P000029
A_01_P000029
FALSE
JV058150
gb|JV058150
chr10:13504048-13503989
GTCCACCTTATGTTGCACACATATAACATTGTGTAAATTGCATACTATGGTTTGACTTGC
A_01_P000030
A_01_P000030
FALSE
JU484147
gb|JU484147|gb|JV057427|gb|JV057428|gb|JU341554
chr2:69798842-69798901
TSA: Macaca mulatta Mamu_370273 mRNA sequence. [JU484147]
TGGAAAAGACTTAGACCTTGACCTGGGTTCTGGGTATATTTGCACTTTTGAGACTGGTAG
A_01_P000031
A_01_P000031
FALSE
696683
ORC5
"origin recognition complex, subunit 5"
ENSMMUT00000016896
ens|ENSMMUT00000016896
chr3:141548760-141548701
ATTATATCATGAAAATCAAGCAGTTTCTATTGCTTTAAATGCTTTTATTAAAGCAATCTA
A_01_P000036
A_01_P000036
FALSE
JU473811
693763
APOOL
apolipoprotein O-like
ENSMMUT00000047910
ens|ENSMMUT00000047910|ens|ENSMMUT00000047909|gb|JU473811|gb|JV044058
chrX:83892488-83892547
TSA: Macaca mulatta Mamu_399429 mRNA sequence. [JU473811]
AAGCTGAAGTAGACTGCATACAGAGACTACATAGAAAACTACAAGATGTGTGACGTTGCA
Total number of rows: 43663 Table truncated, full table size 11438 Kbytes .
Supplementary file
Size
Download
File type/resource
GPL16027_026806_D_GEO_20120509.txt.gz
3.8 Mb
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TXT