Data table |
ID |
GENE_NAME |
COORDINATE |
GB_LIST |
SP_LIST |
SELECT_METHOD |
HOMOLOGY |
GENE |
DESC |
CLASSIFICATION |
N421 |
phospholipase A2; tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta polypeptide (YWHAZ); 14-3-3 protein zeta/delta; protein kinase C inhibitor protein 1 (KCIP1); factor activating exoenzyme S (FAS) |
A1a |
M86400 |
P29312, P29213 |
subtraction between MCF7 & MCF7-ErbB2 (both directions) |
known |
7534 |
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide |
FT09 SC00 |
H207 |
signal transducer CD24 precursor |
A1b |
M58664 |
P25063 |
subtraction between MCF7 & MCF7-ErbB2 (both directions) |
known |
934 |
CD24 antigen (small cell lung carcinoma cluster 4 antigen) |
FA00 SB00 |
CA189 |
upregulated by 1,25-dihydroxyvitamin D3 protein (VDUP1); HHCPA78 homolog |
A1c |
S73591 |
Q16226 |
subtraction between MCF7 & MCF7-ErbB2 (both directions) |
known |
10628 |
upregulated by 1,25-dihydroxyvitamin D-3 |
FX00 SX00 |
AH1253 |
ubiquitin-conjugating enzyme E2; ubiquitin-protein ligase; ubiquitin carrier protein |
A1d |
AF031141 |
O14933 |
subtraction between MCF7 & MCF7-ErbB2 (both directions) |
known |
9246 |
ubiquitin-conjugating enzyme E2L 6 |
FU06 SC00 SN00 |
SO001 |
RET proto-oncogene |
A1e |
AJ243297 |
|
subtraction between MCF7 & MCF7-ErbB2 (both directions) |
known |
|
similar to partial RET gene |
|
H100 |
dihydrodiol dehydrogenase; chlordecone reductase |
A1f |
U05598, S68287 |
P42330, P17516 |
subtraction between MCF7 & MCF7-ErbB2 (both directions) |
known |
1646 |
aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III) |
FL05 FH03 SC00 |
AH745 |
actin-like 6 protein (ACTL6); BAF complex 53-kDa subunit (BAF53A) |
A1g |
AF041474 |
O96019 |
subtraction between MCF7 & MCF7-ErbB2 (both directions) |
known |
86 |
actin-like 6 protein (ACTL6); BAF complex 53-kDa subunit (BAF53A) |
|
AH413 |
60S ribosomal protein L14 (RPL14); CAG-ISL 7 |
A1h |
D87735 |
P50914, Q92579 |
subtraction between MCF7 & MCF7-ErbB2 (both directions) |
known |
9045 |
ribosomal protein L14 |
FN01 SC00 SN00 |
SO002 |
novel gene (SO002) |
A1i |
|
|
subtraction between MCF7 & MCF7-ErbB2 (both directions) |
novel |
|
novel gene (SO002) |
|
SO003 |
KIAA0107 |
A1j |
D14663 |
Q15008 |
subtraction between MCF7 & MCF7-ErbB2 (both directions) |
EST |
|
similar to mRNA for KIAA0107 gene |
|
SO004 |
estrogen-regulated LIV-1 protein |
A1k |
U41060 |
Q13433 |
subtraction between MCF7 & MCF7-ErbB2 (both directions) |
known |
|
similar to breast cancerestrogen regulated LIV-1 protein (LIV-1) mRNA |
|
SO005 |
chromosome 8q21 BAC clone 521F14 (Research Genetics human fibroblast cell line 978SK BAC library) |
A1l |
AB015752 |
|
subtraction between MCF7 & MCF7-ErbB2 (both directions) |
EST |
|
similar to genomic DNAchromosome 8q21BAC clone 521F14 |
|
SO006 |
VAMP-associated protein C (VAPC) |
A1m |
AF086629 |
O95293 |
subtraction between MCF7 & MCF7-ErbB2 (both directions) |
known |
|
similar to VAMP-associated protein C (VAP-C) mRNA |
|
SO007 |
STS clone WI-16567 |
A1n |
G21969 |
|
subtraction between MCF7 & MCF7-ErbB2 (both directions) |
EST |
|
similar to STS WI-16567sequence tagged site |
|
SO008 |
novel gene (SO008) |
A2a |
|
|
subtraction between MCF7 & MCF7-ErbB2 (both directions) |
novel |
|
novel gene (SO008) |
|
AH1434 |
importin alpha 2 subunit; karyopherin alpha 2 subunit; SRP1-alpha; RAG cohort protein 1 |
A2b |
U09559 |
P52292 |
subtraction between MCF7 & MCF7-ErbB2 (both directions) |
known |
3838 |
karyopherin alpha 2 (RAG cohort 1, importin alpha 1) |
FK01 SC00 SN00 SU00 |
AH166 |
high mobility group protein 1 (HMG1) |
A2c |
X12597 |
P09429 |
subtraction between MCF7 & MCF7-ErbB2 (both directions) |
known |
3146 |
high-mobility group (nonhistone chromosomal) protein 1 |
FQ07 SN00 |
B56 |
nucleophosmin (NPM); nucleolar phosphoprotein B23; numatrin |
A2d |
M23613 |
P08693, Q12826, Q14115, Q13440, Q13441, P06748 |
subtraction between MCF7 & MCF7-ErbB2 (both directions) |
known |
4869 |
nucleophosmin (nucleolar phosphoprotein B23, numatrin) |
FG00 FK05 SN00 |
SO009 |
membrane component chromosome 4 surface marker 1 (M4S1); gastrointestinal tumor-associated antigen 2 (GA733-2) |
A2e |
M33011 |
P16422, P18180 |
subtraction between MCF7 & MCF7-ErbB2 (both directions) |
known |
|
similar to (clone GA733-2-2) carcinoma-associated antigen GA733-2 mRNA |
|
SO010 |
novel gene (SO010) |
A2f |
|
|
subtraction between MCF7 & MCF7-ErbB2 (both directions) |
novel |
|
novel gene (SO010) |
|