GEO help: Mouse over screen elements for information.
Status
Public on Mar 26, 2012
Title
GlassLab-Ncrassa-10k-V1
Technology type
spotted oligonucleotide
Distribution
non-commercial
Organism
Neurospora crassa Manufacturer
UC Berkeley, Glass lab
Manufacture protocol
Designed 70mer oligonucleotide immobilized probes using ArrayOligoSelector
Submission date
Dec 02, 2011
Last update date
Mar 26, 2012
Contact name
Chaoguang Tian
E-mail(s)
tian_cg@tib.cas.cn Organization name
Tianjin Institute of Industrial Biotechnology, CAS
Street address
Xiqi Dao 32
City
Tianjin Airport Economic Area
State/province
Tianjin
ZIP/Postal code
300308
Country
China
Samples (58)
GSM841738 , GSM841739 , GSM841740 , GSM841741 , GSM841742 , GSM841743
GSM841744 ,
GSM841745 ,
GSM841746 ,
GSM841747 ,
GSM841748 ,
GSM841749 ,
GSM841750 ,
GSM841751 ,
GSM841752 ,
GSM841753 ,
GSM841754 ,
GSM841755 ,
GSM841756 ,
GSM841757 ,
GSM841758 ,
GSM841759 ,
GSM841760 ,
GSM1024573 ,
GSM1024574 ,
GSM1024575 ,
GSM1024576 ,
GSM1024577 ,
GSM1024578 ,
GSM1024579 ,
GSM1024580 ,
GSM1024581 ,
GSM1024582 ,
GSM1024583 ,
GSM1024584 ,
GSM1024585 ,
GSM1024586 ,
GSM1024587 ,
GSM1024588 ,
GSM1234373 ,
GSM1234374 ,
GSM1234375 ,
GSM1234376 ,
GSM1234377 ,
GSM1234378 ,
GSM1234379 ,
GSM1234380 ,
GSM1234381 ,
GSM1234382 ,
GSM1234383 ,
GSM1234384 ,
GSM1234385 ,
GSM1234386 ,
GSM1234387 ,
GSM1234388 ,
GSM1234389 ,
GSM1234390 ,
GSM1234391 Series (4)
GSE34098 Deciphering regulatory mechanisms associated with hemicellulose degradation in Neurospora crassa
GSE41806 Transcriptional profiling of Neurospora crassa Δmak-2 reveals that mitogen-activated protein kinase MAK-2 participates in the phosphate signaling pathway
GSE50995 Gene expression profiling of Puf knockouts in N. crassa
GSE50997 The evolutionary interplay between Puf RNA binding proteins and their RNA targets
Data table header descriptions ID ID number used to design oligonucleotide probe in microscipic slides
SEQUENCE probe sequence
GeneID Broad Neurospora database accession number
ORF Locus tag
Data table ID SEQUENCE GeneID ORF 100h1_010_779
AGATCCGGAAGCGACTGTTGAGAGTCTTGTGCTCCCTTTGGAGCCGTTTGAGGACGACCCGTTGGCAAAG
NCU06658.2
NCU06658 100h1_020_1161
GCCTACGTCGAAGGTGCGGGCGGCATCCGTGTTGCGGAAGACCAGATTGTTACGGTTGGGAAGAATGATA
NCU06659.2
NCU06659 100h1_040_84
GGTGCCGATCTCTTCATCAACATCCTACTCACCATTCTGGGTTATCTTCCCGGTATTGTCCACGCTCTCT
NCU06660.2
NCU06660 100h1_050_198
GGCAAGATTGAGATCGTTGCCCACAACGAGCTCTCTGGCCGCTACCTCAAGTACCTGACCAAGAAGTTCC
NCU06661.2
NCU06661 100h1_060_469
TGAAAGCCAGACTGCAGATCCAGTACGCGGCGCGTAAGGAGGAGAGGATGTATAAGGGCCCCATTGACTG
NCU06662.2
NCU06662 100h1_070_713
CCGCGAGTGGCAAAGGTGGCCGGTTACCATTCTCTGTGGTGCTTATGGAGGATACTTGCTTGGTAGGGTT
NCU06663.2
NCU06663 100h1_080_356
GCCTGGTGAAGTCGGTCGTCTCCTGACTTTGGAGGAAGTTGGTCACGTATTCGAAGTTCCGGTCAACCTT
NCU06664.2
NCU06664 100h1_100_1528
TCGTTCGCCAGAATCCCAAGTCAAAGATTACTGGACAGGAGATTGCCGGCTGGATGGCCGGCAAGGTGAC
NCU10547.2a
NCU10547 100h1_110_942
TGGCTTCGACGAATGGCTGAAGCTCAAAGAAAGAGAGAGCGGGCACACACGCCGTTCCCCGTTGGTGTAT
NCU10547.2b
NCU10547 100h1_120_1522
CCAAGCAGCGTGCTGCCCTTACTAACATTTTCCGCGCTTGCGTCGGTCTCGAACCTGAGTCTGACATGAC
NCU06666.2
NCU06666 100h1_130_1740
CACCACGTCGGTTGTTTCCGGTGTGGCGATTGCAAGCTCGTGCTAAAGGACGGCTATTTCGAGGTCAACG
NCU06668.2
NCU06668 100h1_150_1987
CTGCCATGTTTCTCCATCCGCTCAAGGACGTCAGGCCGACACCGAAGGGGTATACATCTGAGTCGAGGTT
NCU06669.2
NCU06669 100h1_190_1601
AGTAGTTGCTGCCGATTCGATGAAAGACCAAACGCTCGACCAACAATGTACCGTCACCCGTCCCGGCGTG
NCU06672.2
NCU06672 100h1_200_388
GATGGCGCCGCTTCCGTGAGCGCGGGGAAAAACAACAACGTCACCGAAACAACATGAAGTCCTACTCCTC
NCU06673.2
NCU06673 100h1_210_218
GCCACAACCTTTATTACCATTTCCCCCTCGGTATTCGATTCTCCTTTTGCGGTTCAAGGGAGGGCATGGG
100h1_210
100h1_220_752
GCGGTCGAATGTGTCGAGTGTTACGCTGACCAACAAGTGGCTGTTTGAGAAGCGAAGGAGGCCGGATTGC
NCU06674.2
NCU06674 100h1_230_980
CGTCTTCGTGCTGAGGGGGTTGCGTGCCTTGGGGTTGGATGAAAAAGCCTTGTCCTCGCCATTTTTCACG
NCU06675.2
NCU06675 100h1_240_1876
TATCCGGCCAGTCCCAGACCGGGGCCTTTGAGCCAACCGCAGAATGGATTGATAGTTGGCTTCCAGAGTT
NCU06676.2
NCU06676 103e1_010_1643
AGACGAAGCCAAGGCAAGCCTCCAGAAGAGGGTGAACGAGATATGGGCCCATCTGAGCCGCGATACTAGT
NCU07144.2
NCU07144 103e1_020_3115
TGGACAACCAAGACATGCCGCCGTGTCTGCATCTGGATGTGAGCGGCACGACATCGAAGCGTAAAACAGG
NCU07146.2
NCU07146
10926 1128 Kbytes .Supplementary data files not provided
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