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Platform GPL1434 Query DataSets for GPL1434
Status Public on Sep 03, 2004
Title 10K AgR Bovine Array
Technology type spotted DNA/cDNA
Distribution non-commercial
Organism Bos taurus
 
Description This array contains spotted PCR products from our bovine EST collection. Included are housekeeping genes, water blanks (negative PCR) and no DNA blanks (to estimate carryover).
 
Contributor(s) Wilson T, McEwan J, McCulloch A, Crawford A
Submission date Sep 02, 2004
Last update date May 26, 2005
Contact name Theresa Wilson
E-mail(s) theresa.wilson@agresearch.co.nz
Phone 64 3 479 3926
Organization name AgResearch
Department
Street address 710 Cumberland Street
City Dunedin
State/province n/a
ZIP/Postal code PO Box 56
Country New Zealand
 
Samples (16) GSM30263, GSM30264, GSM30265, GSM30266, GSM30267, GSM30268 
Series (1)
GSE1728 Parasite resistance in the small intestine of sheep

Data table header descriptions
ID
BLOCK Refers to the printing pins used
RW Internal location in block
CL Internal location in block
Access number Refers to our internal database system
BLAST_HIT Blasting EST contigs against the Human genome for annotation
SPOT_ID
SEQUENCE DNA sequence of each bovine EST

Data table
ID BLOCK RW CL Access number BLAST_HIT SPOT_ID SEQUENCE
67897 1 1 1 AGNZ14269 NM_001312 GGGCGTACGGACCATGGCCTCCAAGTGCCCCAAGTGCGACAAGACCGTGTACTTCGCTGAGAAGGTGAGCTCCCTGGGCAAAGACTGGCACAGATTCTGCCTCAGGTGCGAGCACTGCAGCAAGACGCTGACCCCTGGGGGCCATGCCGAGCATGATGGAAAGCCCTTCTGCCACAAGCCCTGCTATGCCACGCTGTTTGGACCCAAAGGGGTGAACATCGGAGGGGCCGGCTCCTACATCTACGAGAAGCCCTCTGCGGAGAAACCCCAGGTCACCGGCCCCATCGAGGTCCCGGTGGCCCGAACTGAGGAGCGGAAAGCCAGCGGCCCCCCGAAGGGGCCCAGCAAAGCCTCCAGCGTCACCACGTTCACCGGGGAGCCCAACATGTGTCCTCGCTGCAACAAGAGGGTCTACTTCGCCGAGAAGGTGACGTCTCTGGGCAAGGACTGGCACCGGCCGTGCCTGCGCTGCGAGCGCTGTGGGAAGACGCTGACCCCGGGCGGGCACGCGGAGCACG
67873 1 1 2 AGNZ14265 NM_000221 GGTGAGAACGGGGACCGTGGGTGGAGGGCAGTGTAGTCGGGGGGTAAGGGCCGGGTGAAGGTCATACGAGAGGGGCTTCGCAGGGCAAGGAAGTCAGATTTCCTGGCATATTGAGTGCAGCACTTTCACAGCATCATCTTTTAGGATTTGAAATAGCTTAATTGGAATTCTGGGGGACAAAGTATCACCTTGTAATTATTAATACTGCCTTGTCTTGCACGGTGCAGGCCACAGTGCCCTCACCTGCTTGGTTCAAACAGGGTACATATCCTCAGTCCCAAAATCCACCCCATCTAGCGAAATCTTTCCTGCTTGAATCAGACTGAAGGCCAGGGTCAGTCAGGATCTAAAAGAATGTCCGTGAGGGTTTTCCTCCCTGAGCTCTGGCCATGCTCTCCCACCTCTCCTACCCCCCTAAGCCTGTGACGAACCCCAGTCCCTTCCTAGCCTCTCCACTTGCACCCCAGGGCCCCTGGTGGCCCCACCACCTACCCTCTAATCCCCAACCCCCCGCCGAACTGCGCCTCCCCGGGTTACTCCGCCCTGGCAGTTTTGTCC
67849 1 1 3 AGNZ13029 NM_017675 GGGACCACATCAGCGTCAACTCCCTGGATGACAATTCTGTGGATCTGGAAAACAGTGCGCAGGAAATCAAGGCAAGATGGGGGATGAGTTGGTACCTGGGGTTTCTGACTTAGGGTGCTTCTCTGAAGAGGTGGGGTTCAGGACAGAGCTCGAGGGACCTGCTGCTGACATGGGTGTGTCTCTGCACTCAGCCTTGGGAAATCCCATGGCTTTGGAATGGGACCCAATCCTTATTCCTCTACTCATTCACTGTGACCCTGGGCCGTGACTTCTTCCCTCTGGTTCTCAGTTTTCTAATCTATAAATGGGGATCAGAACACCAACTATTCAAAACTGTTGTGAGGATGAAATAAGAGTGGGTATAAAAACC
67825 1 1 4 AGNZ13025 AGNZ13025 GTATAAGTCAATTATTTCATGCACAGAGCATTAAAATTCCTTAAGATAGTCTCCTGTTCGTCACTGGGCTTTGCTTTGATGGTTTCCTTGGATAAAAGGCAAGCTCACATCCTAGCCATTTTCAGAGATGCCATTTCTCTGGCTCCATAAGCTCTTACACAAAGCCTGGCAGACAGCAGATTAACATGTATTCTGCTACACCAGCTCCTTTCTATTCATTTTATAAAATCGTCTCAATAGGTTTGTATCTCCATGTTCTATAAGTTGATTAATTCTAACTGATAATTCTTTCTGATCAATCACTTACCAAAATATCAAAATAAGCATCAATAGTCCATTTACAATAAGGAAAAGTG
67801 1 1 5 AGNZ13021 NM_032924 GGTCCAACGGGGCCTGTTTGGTGTCCGGTTCCCTATATCTACCGTCCCTGCCCCCAGGTCCTACAGCACTGATAGCAAATAAGTCTGAACTCCCAGGGATTTGAACAGAGGCTGCCAAGTTCACAATAATTGCTACTCTGGCCTTCTAGAGACTAACTCCAGAGAAGGAAGGAAAGAGTCCAGCAGGAGACCAGAGATCCGAGCTTCTAGTACGACCCATGGAAACTCAGGCTGATCGAGTATCTCATGAACCTCAAGCCTTGCCGAGAGCGCTCTTCCTTGCTCAAAAGGTCGCACGTTTT
67777 1 1 6 AGNZ13005 NM_022149 GGCAAAACCCCGTGTCATCTCTCCTAGTCCTCCTGCAGCCGCCCTAGCCGCTGTCCAACCCTTCCCCCGGGGTTTGTGCAGCGGCTCGCACACCCCGCGGCCCGCGTACGCGCTCTGCACCTGCCTACCCGAAAACATGTTGCAGAAACCCGAGAGCGGGGCTCTCCCCATCTCTCACGCGGAGAGGGAGATGGATGGCAGCCATGACGGTGAGACCCAGGCTCTGACCGCCTCGCAGGAGATGGCCCCGAGCCCCCTCCTGCAGGAGAGGCCCGAGGACGGACCTTGGCGCTGTAAGGGAGGAGGGGGCTACAGAACCCTCTCTCACCCCGAAAGGCGCGAGGGCTTTGGCA
67753 1 1 7 AGNZ13001 AGNZ13001 GCTATTCTGTAGGCTGGGTCCGCCAGGCTCCGGGAAAGGCGCCGGAGTGGATTGGCAGTATACATCATGATGGAGAGACATGCTATAACGAAGCCCTGAAATCCCGGTTCAGTATAACCAAGGACAATTCCGAGAGCCAAGTCTCCCTGTCAATGAGCAGCGTGACAGCTGAGGACACGGCCACATACTACTGTGCGAAGTCAGGGAGTAAATATGGTGTGATTGGTTTTCGTTGTATCAGTTGGAATTCTGCCGCAACAATCGCGGCCTGGGGCCAAGGACTCTTGGTCACCATCTCCTCAGAGAGTGAAACCAGCCCCAGCATCTTTCCGCTGAGCCTTGGGAACAACGACCCAGCCGGGCAGGTGGTCATC
67729 1 1 8 AGNZ12997 AGNZ12997 AACAAGATCCAGTGTAAGGTCAAGACCCAGGCAAAGGACACAATCTAGTCGTAGCACAAGACCGAGCCAGACTTCCATTCAAGCGTGGATTCTGCCCCACGGTTCGGATCCACTGCCAAGTGTCGCATCCCCCTAACCAGTGTTGGAGAGATGCTCACTGCCCAGGGGCCAA
67705 1 1 9 AGNZ12981 NM_020648 GTATTTTACAATGTAGAACTCTCTGGTCTGGCTCACTCCTGCACTCCACATATGACAAAGCTGTAGGGAGAGTCTCTCCTCCTCCAACCCAGGCCCAGAGTGCTGGTGTGGGTCATATGAAGCATCTTTACAAGAATTGCCTGTCATACCTGAGGCTTTGTGAAGAGAACGGCTCAGTAAACAGGAAGGGAGAGCTTTCTCTGACTTAAGGTACCAGCATAAAGAGCTCCAGGAATGGGAAACCACTGCCACCTGGACTCCAGGAACACAGCACCCCTTGTATGGAGA
67681 1 1 10 AGNZ12977 NM_031310 GAGATGGGCTTGGCGATGGAGCACGGGAGCCCCTACTCACGGGCCGGGAGCAGCTCCAGGGGCTCCGGTACTATCTGCGCTACTTTTTCCTCTTCGTCTCGCTCATCCAATTCCTCATCATCCTTGGCCTCGTCCTCTTCATGGTCTACGGCAACGTGCACGTGAGTACCGAGTCCAACCTGCAGGCCACCGAGCGCCGGGCCGACGGCCTGTACGGCCAGGTGGTGGGGCTCACGGCTTCCCAGGCCAACCTGACCAAGGAGCTCAACCTCACTGCCCGCGCCAAGGAGGCGATCAACCAGATGATGCTCAGCGCCCGCCGAGACTTGGACCGAATCAACGCCAGCTTCCGCCAGTGCCAGGCCGATCGGGTGATTTACATGA
67657 1 1 11 AGNZ12973 NM_006698 GGGAAGAGGGTCGCGGCAGCGAAGGCGACAGCAGTGGCCGCGGCGCCATGGCGGGTCTCGCAGGACCCTGCTGCCTTGGTGATCCCGGGCTGACAGCCAGAGAGCACAGCGGCTCAGCTCCTGGAGAGCGAGGGTTGAAGAAAGCAGAGGGCAGCCGCCCGCGCCCGCTAGCTCCTATTAGGTCGGTTCCTGCAGCGGTGCCCGGTGGCCTTGGCGAAGGCCCTGTCCGGCAGAGATCATGTATTGCCTCCAGTGGCTGCTGCCCGTCCTCCTCATCCCCAAGCCCCTCAACCCCGCCCTGTGGTTCAGCCACTCCATGTTCATGGGCTTCTACCTGCTCAGCTTCCTCCTGGAGCGGAAGCCTTGCACAA
67633 1 1 12 AGNZ12956 NM_002945 GCAGGGTCAAACTGGAGACCTACAATGATGAGTCTCGAATTAAGGCCACGGTGGTGGACGTGANCCTGTGGACTACAGAGAATACGGCAGAAGGCTGGTCATGAACATCAGGAGGAACGCGGCGATGTGAGAGGATCGTGCCTATGGGGCAGGAGCTTGTGGATAGAGGGCTGAAGCAACCACCCCCCCACGCCACCTCCGACCTCCACCCGCACCACCATTCCCGCCCTGACTGACGGCGGTGCAGAGCGCCCCTCTACCATGGACTAAGCCATCACCTCTCGTCACACCTGGGAACCCACTGGCAGCAAAGGCACACAGTGGAATACGCCTAAGTGAAAAGGGAAATACG
67609 1 1 13 AGNZ12951 AGNZ12951 NCCCCAGGCACCCACTCCCGAGCTTGCTCAAACTCATGTCCATCGAGTCGGTGATGCCATCCAACCTTCTCATCCTCTGTCATCCCCTTCCCTACCCCAAGTCTTTCCCAGCATCAGGGTTTTTTCCGGCATTCTCAGGCATGGTCTTCCCCTCCATCTCCATGGTCACGCCCCACCCTCTGGTCCAGGCACTCCTTATGGCAAGGAGACAGGCCCCAGTCTTGGGGCAGGTGAGGCCACAGGGGTGTGCCCACCCTGAAACGCTCTGCACTTGGGCATCACCAGGACACTGCCAGGGTGCTCTCCAATCATGGATGGCCTGNGCCAGCATGAAGATGTGGGGCGGGAGCCCAGGCTTTCTCAACCTCACAG
67585 1 1 14 AGNZ12947 NM_020886 GCGGGAGGAGGGTGACCCACGGAGGGGCCTGTCGGCCATGACTGCGGAGCTGCAGCAGGACGATCCGCCGGAGCGACCGACCGCCACGGCTCGAGCTGCCAAATGCTGTTAAATCAACTGAGAGAAATCACAGGCATTCAGGACCCTTCTTTTCTTCATGAAGCTCTGAAGGCCAGTAATGGTGACATCACCCAGGCCGTCAGCCTTCTCACTGATGAAAGAGTTAAAGAGCCC
67898 1 2 1 AGNZ13127 NM_003838 TTTTTTTTTTCCAGTTCTATTTCAATTTATTTATGTTAAAACACAAAACTCTTGACAAAACTTTTCTCTATTATTAGACTTTGGTATGAAAACATTTCAAATATGTGCCTATACCAAAATAAGAACACAGTGCTCAGAGTTCCAGCCGACTTTTATTGTCTTGAAGCTGTTTATCATCTGTATATTTTCACAGTCATTCTAGTTCTCTGGCTCCTTCCTGCTGTCTACCTTTTGGCCATTTGCTGCTTCTCAGTGTCATTACTAGTGCATGGTCAGAAAATTAAAAAATGAAAAGTAAAAATCTGTCCATCTGGTAATTTTAATATTTCTGTTAAAGGATTAATGAAGGAGGATGAAGATAATGTCCACAATGAACTTATGAATTATCAGGGAATCCCAATTATTCCAACATTTTCTTATACAGATTCTTGAGTTTTATGTGTATATATGCTTATAGTTATTCAGGCTAAATGCTGACTTGCTCTGTACAGCATTTAACATCTTTAGGGATGTTGTCACTGAATCACTCAAAGAAGAACAAACTGGGAAAATACGAGCATTCCACAAGCTCAAACAT
67874 1 2 2 AGNZ13111 XM_114087 GAGCGAATGCACCCAGTGATGGCCTCTGACATCCCAGCAGCCCCGGTGGCCCCTGCTGAGCCACAGACAGTGCTGGATGCCCTGCAGCAGAGGCTGAACAAGTACCGCGAGGCAGGCACCCAAGCGCGGGGCAGTGGGGATGAGCGCAAGGCCCGGATGCACGAGCGCATTGCCAAGCAATATCAAGATGCCATTCGAGCCCACCGGGCGGGACGGAAAGTTGACTTTGCCGAGTTACCTGTTCCTCCAGGATTCCCCCCTATACCTGGCCTGGAGCCCACCGTGGCTACTGAGGAGGATATGATGGCAGCTACTTTAGCAGCTGCCCAGAAACTGGCCTCCGCAGAAGATACAGCCCCAGTAGAGGAAGAGGAGGATAACAACAAGGATGAGCCCCCAGCCCAGGCCCCAGTGGCCAAGAAGCCAGCACAGCCTCTCGCCCCTTCTTCGCGGTCCCTGCCTGAGCCCAAGACCTCGAGTTCTAAGGAGGTGCTGAGTCCATCTGCACGAGAGCAGCTTGCCCTGCTGGAGGCACGGAAACTGCAGTACCAGCGGGCAGCCCTACAGGCCAAGCGTGGCCGGGACCTGGAGCAGGCCAAAGCCCATCTGCGGGT
67850 1 2 3 AGNZ13107 AGNZ13107 GCCGCTGACTTTCTCAACCAACCTAAAGATTTGGTACCCTTTATCTACTATTTGGTGCTTGGGCCGGTATAGTAGGAACAGCTCTAAGCCTTCTAATTCGCGCTGAATTAGGCCAACCCGGAACTCTGCTCGGAGACGACCAAATCTACAACGTAGTTGTAACCGCACACGCATTTGTAATAATCTTCTTCATAGTAATACCAATCATAATTGGAGGATTCGGTAACTGACTTGTTCCCCTAATAATTGGTGCTCCCGATATAGCATTTCCCCGAATAAATAATATAAGCTTCTGACTCCTCCCTCCCTCATTCCTACTACTCCTCGCATCCTCTATAGTTGAAGCTGGGGCAGGAACAGGCTGAACCGTGTACCCTCCCTTAGCAGGCAACCTAGCCCATGCAGGAGCTTCAGTAGATCTAACCATTTTCTCTTTACACTTAGCAGGAGTTTCCTCAATTTTAGGAGCCATCAACTTCATTACAACAATTATCAACATAAAGCCCCCCGCAATGTCACAATACCAAACCCCTCTGTTCGTATGATCCGTAATAATTACCGCCGTACTACTACTACTCTCGCTCCCTGTATTAGCAGCCGGCATCACAATGCTATTAACAGACCGGAACCTAAATACAACCTTCTTCGACCCGGCAGGAGGAGGAGACCCTATTCTATATCAACACTTATTCTGATTCTTTGGACACCCCGAAGTCTATATTTTAATCTTA
67826 1 2 4 AGNZ13103 NM_007222 GGTCAAACACGAAGCCACGTTGGCAAACCCTGATTCGTTTGGCATTCGGGCTAAAAAGACTAAAGAGCAGCTGGCAGAATTAAAAGTCAGCTACCTGAAGAATCAGTTTCCCCATGATGCTGAAATTATCAGACTGATGAAAATCACAGGACTGACCAAAGGAGAGATTAAAAAATGGTTTAGTGACACAAGGTACAACCAGAGAAATTCAAAGAGTAATCAGTGCTTACATCTCAACAATGACTCCTCTGCCACTATCATCATAGACTCGAGCGATGAAACCACAGAATCCCCAGCTGTTGTGACTTCACAGCAGAAACAGTCCTGGAATCCTTTTCCCGACTTTACTCCCCAGAAGTTTAAAGAGAAGACAGCGGAGCAGCTTCGTGCCCTGCAGGCAAGTTTTCTCAACAGCTCTGTACTTACAGAAGAAGAACTAAATAGGTTAAGAGCGCAAACCAAACTCACCAGAAGGGAAATTGATGCTTGGTTTACAGAGAAGAAGAAATCAAAAGCTTTAAAGGAAGAGAAAGTGGAAGTAGAGGAAAGCAATGCAGGTAGTTCCAAAGAAGAAGCTGGAGAAACTTCTCCTGGAGATGAAACTAGTGCACCTAAGTCAGGGAGTACTGGCAAGATATGTAAAAAAACACCCGAGCAGCTGCACATGCTTAAAAGTGCATT
67802 1 2 5 AGNZ13481 XM_370835 GCTCTCATCTGCTCCAAGATGAACCCACTGTGGACCCTCCTCTTTGTGCTGTCAGCCCCCAGAGGGGTCCTGTCCCANGTGCAGCTGCGGGAGTCGGGCCCCAGCCTGGTGAAGCCGTCACAGACCCTCTCGCTCACCTGCACGGCGTCTGGATCTCATTAAGCGACAAGGCTGTAGGCTGGGTCCGCCAGGCTCCAGGAAAGGCGCTGGAGTGGCTCGGTAGTATCTGACACTGGTGGAAGCACAGGGTATAACCCAGGCCTGAAATCCCGG
67778 1 2 6 AGNZ14189 NM_006696 AGGGTGATTAAGAGCAAGAGGGGTTGAGGGTTGCTGGGCAGTTCCACTCAGGACTAATAAAGTAATAGTTAGATACACTAACCCATCCAGATTAGTAAGGAACCTTCCTGAGTTTGAGAAGTCAGATAAAGGTTCTCTGTTGTCTCTTAGGTAACCCCTGGGACTTTGCCGAGTACCCCAGTCACCTCGTTTCCTGGAATTCCTGACACCCTTCCTCCAGGCTCTGCACCCTTAGAAGCCCCCATGACCCCAGTAACAGATGATTCACCCCAGAAAAAGATGCTTGGACAGAAAGCAACTCCACCCCCTTCCCCTCTGCTGTCAGAGCT

Total number of rows: 10752

Table truncated, full table size 4811 Kbytes.




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Supplementary data files not provided
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