GSE33573 |
In vivo and transcriptome-wide identification of RNA-binding protein target sites [RNA-Seq] |
GSE34321 |
Analysis of 3' 2'-O-methylated small RNAs in Caenorhabditis elegans |
GSE35550 |
Analysis of 22G siRNA triggered siRNA amplification and 3' 2'-O-methylated small RNAs in Caenorhabditis elegans |
GSE36494 |
The RDE-10/RDE-11 complex triggers RNAi induced mRNA degradation by association with target mRNA in C. elegans |
GSE37083 |
The Caenorhabditis elegans RDE-10/RDE-11 complex regulates RNAi by promoting secondary siRNA amplification |
GSE39574 |
RNA-seq quantification of expression changes upon unc-62 knockdown in adult Caenorhabditis elegans. |
GSE39789 |
H4K20me1 contributes to downregulation of X-linked genes for Caenorhabditis elegans dosage compensation |
GSE40053 |
C. elegans piRNAs are processed from capped-small RNAs transcribed at promoters throughout the genome |
GSE40457 |
Transgenerational profiling of small non-coding RNAs in C.elegans RSD mutants |
GSE40460 |
RSD-2 and RSD-6 promote germ cell immortality by repressing spermatogenesis and repeat loci via small interfering RNAs |
GSE40572 |
Transgenerational changes in small RNA profiles of C.elegans mutants lacking PRG-1 |
GSE40573 |
Reduced insulin/IGF-1-like signaling restores germ cell immortality in Caenorhabditis elegans Piwi mutants |
GSE41057 |
Changes in small RNAs upon Viral infection of C.elegans |
GSE41058 |
Competition between viral-derived and endogenous small RNA pathways regulates gene expression in response to viral infection in C.elegans. |
GSE41205 |
Influence of p38 MAPK (PMK-1) on the heat stress response of C. elegans |
GSE41367 |
Caenorhabditis sex-specific RNAseq |
GSE41402 |
microRNAs in C. elegans, P. pacificus, and S. ratti: Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes |
GSE41461 |
Analysis of miRNA, piRNA and siRNA in Caenorhabditis species |
GSE42714 |
Integral nuclear pore proteins bind to Pol III genes and are required for Pol III transcript processing in C. elegans [seq] |
GSE42741 |
Chromatin Immunoprecipitation of Nuclear Pore Proteins in C. elegans |
GSE42819 |
The landscape of RNA polymerase II transcription initiation in C. elegans reveals a novel regulatory architecture |
GSE43084 |
Using GRO-seq experiments to determine the mechanism of C. elegans dosage compensation's control of transcription |
GSE43085 |
Development of GRO-cap (GRO-seq followed by 5'-cap enrichment) to map transcription start sites in C. elegans |
GSE43087 |
Condensin Controls Recruitment of RNA Polymerase II to Achieve X-Chromosome Dosage Compensation |
GSE44412 |
Holocentromeres are dispersed point centromeres localized at transcription factor hotspots |
GSE45678 |
Genome-wide distribution of the three condensin complexes in C. elegans |
GSE46051 |
Deep sequencing of endogenous mRNA from Caenorhabditis elegans in the presence and absence of rotenone at 4 different time points |
GSE46344 |
Deep sequencing of endogenous mRNA from Caenorhabditis elegans in the presence of 2-deoxy-D-glucose (DOG) at 4 different time points |
GSE46753 |
microRNA decay analysis in the first larval stage Caenorhabditis elegans |
GSE47132 |
ZFP-1(AF10)/DOT-1 Complex Opposes H2B Ubiquitination to Reduce Pol II Transcription |
GSE48140 |
mRNA and Ribosome Profiling in Four Nematode Species Traversing a Shared Developmental Transition |
GSE48917 |
Chromatin Immunoprecipitation of TRA-1 in C. elegans and C. briggsae |
GSE49043 |
Dampening of expression oscillations by synchronous regulation of a microRNA and its target |
GSE49532 |
The C. elegans CSR-1 argonaute pathway counteracts epigenetic silencing to promote germline gene expression |
GSE49662 |
Deep sequencing of endogenous mRNA from Caenorhabditis elegans in the presence and absence of 1-methylnicotinamide (MNA) and nicotinic acid (NA) |
GSE49672 |
Argonautes promote male fertility and provide a paternal memory of germline gene expression in C. elegans |
GSE49870 |
HOT regions are CpG dense promoters in C. elegans and humans |
GSE49903 |
Chromatin organization in NPP-13 knockdown C. elegans embryos [seq] |
GSE49946 |
Global effects of the CSR-1 RNA interference pathway on transcriptional landscape |
GSE50488 |
Chromatin organization in NPP-13 knockdown C. elegans embryos |
GSE50548 |
Spatiotemporal embryonic transcriptomics reveals the evolutionary history of the endoderm germ layer |
GSE51556 |
The dsRBP and inactive editor, ADR-1, utilizes dsRNA binding to regulate A-to-I RNA editing across the C. elegans transcriptome |
GSE52102 |
ChIPseq examination of EAP-1 binding across generations of spr-5(by101) mutant worms |
GSE52785 |
Analysis of transgene siRNAs and ARL-8-dependent siRNAs in Caenorhabditis elegans |
GSE52861 |
Extensive oscillatory gene expression during C. elegans larval development [RNA-seq for polyA enriched mRNAs] |
GSE52864 |
Developmental Timecourses total-RNA sequencing [Ribosome repleted total RNA] |
GSE52905 |
Extensive oscillatory gene expression during C. elegans larval development [Ribosome footprinting] |
GSE52910 |
Extensive oscillatory gene expression during C. elegans larval development |
GSE53144 |
Male and Female DNA and RNA sequencing in several nematode species |
GSE53830 |
The DEAD box helicase RDE-12 promotes amplification of RNAi in cytoplasmic foci in C. elegans |
GSE53970 |
A Genome-wide RNAi screen identifies factors required for distinct stages of C. elegans piRNA biogenesis |
GSE54173 |
Expression profile by RNA-seq of wild type or Caenorhabditis elegans mutant for the Werner syndrome gene ortholog treated with or without vitamin C |
GSE54320 |
MUT-14 and SMUT-1 DEAD box RNA helicases have overlapping roles in germline RNAi and endogenous siRNA formation in C. elegans |
GSE54517 |
mRNAs that co-purify with OMA-1 in the C. elegans germline (sequencing) |
GSE54518 |
mRNAs that co-purify with OMA-1 in the C. elegans germline |
GSE54853 |
RNA-seq of C.elegans and M.musculus in the presence and absence of D-Glucosamine (GlcN) |
GSE55325 |
Transcriptome wide identification of Dicer binding in human and C. elegans reveals a variety of substrates (CEL PAR-CLIP) |
GSE55329 |
Transcriptome wide identification of Dicer binding in human and C. elegans reveals a variety of substrates (CEL RNA-Seq) |
GSE55332 |
Transcriptome wide identification of Dicer binding in human and C. elegans reveals a variety of substrates (CEL small RNA) |
GSE55333 |
Transcriptome wide identification of Dicer binding in human and C. elegans reveals a variety of substrates |
GSE56180 |
Unambiguous Identification of miRNA:target site Interactions by Different Types of Ligation Reactions |
GSE56271 |
The expression mRNAs after prg-1 mutation |
GSE56272 |
The expression of small RNAs after prg-1 mutation |
GSE56274 |
The expression of mRNAs and small RNAs after prg-1 mutation |
GSE56627 |
seq-UP07329_H4K16ac:JBC1888188_N2_L3 |
GSE56661 |
seq-UP07329_H4K16ac:DAM1687546_N2_Eemb |
GSE57109 |
A new dataset of spermatogenic vs oogenic transcriptomes in the nematode C. elegans |
GSE57351 |
Paternal RNA contributions in the C. elegans zygote |
GSE57739 |
Innate host defense requires TFEB-mediated transcription of cytoprotective and antimicrobial genes |
GSE58031 |
Endogenous germline nuclear RNAi-mediated transcriptional silencing and histone H3 lysine 9 methylation in defined regions of the Caenorhabditis elegans genome |
GSE58141 |
Global characterization of the oocyte-to-embryo transition in C. elegans uncovers a novel mRNA turnover mechanism |
GSE58918 |
The cytoplasmic poly(A) polymerases GLD-2 and GLD-4 promote general gene expression via distinct mechanisms |
GSE58931 |
Neuronal CRTC-1 governs systemic mitochondrial metabolism and lifespan via a catecholamine signal |
GSE59300 |
A Ribonuclease Coordinates siRNA Amplification and mRNA Cleavage during RNAi |
GSE59597 |
Condensin-Driven Remodeling of X-Chromosome Topology during Dosage Compensation [ChIP-Seq] |
GSE59705 |
The role of SPK-1 in alternative splicing regulation in C. elegans |
GSE59715 |
Condensin-Driven Remodeling of X-Chromosome Topology during Dosage Compensation [RNA-Seq] |
GSE59716 |
Condensin-Driven Remodeling of X-Chromosome Topology during Dosage Compensation |
GSE59943 |
Blastomere-specific transcriptome sequencing reveals a determinant of anterior specification in C. elegans |
GSE60020 |
Orsay Virus infection is neither systemic nor transgenerational |
GSE60063 |
Contrasting invertebrate immune defense behaviors caused by a single gene, the Caenorhabditis elegans neuropeptide receptor gene npr-1 |
GSE60419 |
Cooperative target mRNA destabilization and translation inhibition by miR-58 microRNA family in C. elegans [miRNA-Seq] |
GSE60420 |
Cooperative target mRNA destabilization and translation inhibition by miR-58 microRNA family in C. elegans [RNA-Seq] |
GSE60421 |
Cooperative target mRNA destabilization and translation inhibition by miR-58 microRNA family in C. elegans |
GSE60755 |
Caenorhabditis elegans high resolution developmental transcriptomic time-course |
GSE60825 |
Genome wide RNA Sequencing of whole C. elegans RNA |
GSE61537 |
Differential gene expression in ahr-1 mutants compared to wild-type C. elegans |
GSE61564 |
A comprehensive catalog of the C. elegans dsRNAome |
GSE61581 |
TDP-1, the C. elegans ortholog of TDP-43, limits the accumulation of double stranded RNA |
GSE61733 |
The RtcB RNA ligase is an essential component of the metazoan unfolded protein response. |
GSE62720 |
Tri-methylation of lysine 36 on H3 restricts gene expression variation during aging and impacts lifespan |
GSE62833 |
The DREAM complex promotes gene body deposition of H2A.Z for target repression |
GSE62857 |
Defining soma-specific/enriched and germline-specific/enriched transcripts |
GSE62861 |
Functional characterization of C. elegans Y-box binding proteins reveals tissue-specific functions and a critical role in the formation of polysomes |
GSE63075 |
RNA-seq analysis of germline stem cell removal and loss of SKN-1 in C. elegans |
GSE63114 |
piRNAs and transgenerational RNA interference protect essential genes from RNA silencing in C. elegans |
GSE63435 |
A variety of Dicer substrates in human and C. elegans (CEL RNA-seq) |
GSE63528 |
Suppression of Transcriptional Drift Extends C. elegans Lifespan by Postponing the Onset of Mortality |
GSE63823 |
Analysis of intron sequences reveals hallmarks of circular RNA biogenesis in animals |
GSE64401 |
Overlapping and unique signatures in the proteomic and transcriptomic responses of the nematode Caenorhabditis elegans towards pathogenic Bacillus thuringiensis |
GSE64672 |
mRNA profiling of wildtype, germline depleted, NMD mutant C. elegans whole worms and wildtype dissected gonads |
GSE65406 |
Transcriptomic analysis of germline tumor in fasted C. elegans |
GSE65948 |
Transcriptome-wide measurement of ribosomal occupancy by ribosome profiling |
GSE66764 |
Casein kinase II promotes target silencing by miRISC through direct phosphorylation of the DEAD-box RNA helicase CGH-1 |
GSE67028 |
Enrichment of H3K9me2 on unsynapsed chromatin in C. elegans does not target de novo sites [ChIP-Seq] |
GSE67029 |
Enrichment of H3K9me2 on unsynapsed chromatin in C. elegans does not target de novo sites [RNA-Seq] |
GSE67030 |
Enrichment of H3K9me2 on unsynapsed chromatin in C. elegans does not target de novo sites |
GSE67650 |
Developmental dynamics of C. elegans dosage compensation |
GSE68203 |
Genome-wide RNA Pol II-CTD occupancy in wild type and mutant worms |
GSE69261 |
Transcriptional profile of C. elegans following RNAi of elt-2 [L1 stage] |
GSE69262 |
Transcriptional profile of C. elegans following RNAi of elt-2 [L4 stage] |
GSE69263 |
Transcriptional profile of C. elegans following over-expression of elt-2 [L4 stage & Day 13] |
GSE69264 |
Transcriptional profile of C. elegans following RNAi of elt-2 |
GSE70185 |
The mid-developmental transition and the evolution of animal body plans |
GSE70426 |
Regulation of germline gene expression in C. elegans germline stem cells. |
GSE71720 |
Defining the Roles and Regulation of the GATA-factor ELT-2 in the C. elegans Endoderm |
GSE71772 |
Transcriptome analysis of sexual dimorphism in the somatic gonadal precursor cells of Caenorhabditis elegans |
GSE72426 |
daf-16/FoxO isoform-specific deletion mutants |
GSE72952 |
RNA-seq from animals treated with RNAi against prp-8, prp-6, and prp-31 |
GSE74067 |
RNA-seq for monitoring expression changes in absence of chromatin anchoring |
GSE74134 |
Perinuclear anchoring of H3K9-methylated chromatin stabilizes induced cell fate |
GSE74399 |
Germline nuclear RNAi in C. elegans represses transgenerational inheritance of heat-induced gene transcriptional activation (chip-seq analysis) |
GSE74403 |
Germline nuclear RNAi in C. elegans represses transgenerational inheritance of heat-induced gene transcriptional activation (mRNA profiling) |
GSE74404 |
Germline nuclear RNAi in C. elegans represses transgenerational inheritance of heat-induced gene transcriptional activation (sRNA profiling) |
GSE74405 |
Germline nuclear RNAi in C. elegans represses transgenerational inheritance of heat-induced gene transcriptional activation |
GSE74496 |
Trans-generatioanl epigenetic inheritance and resetting of an environmentally-triggered change in gene expression in C. elegans |
GSE75703 |
RNA-seq from L4 animals treated with RNAi against gfp (control), ham-3, and swsn-2.2 |
GSE76136 |
The genomic landscape of PUF binding in stem cells |
GSE76521 |
An RNA binding polymer specifies nematode sperm fate |
GSE76773 |
Nuclear Envelope Retention of LINC Complexes Is Promoted by SUN-1 Oligomerization in the Caenorhabditis elegans Germ Line |
GSE76930 |
A Streamlined Tethered Chromosome Conformation Capture Protocol |
GSE76946 |
Transcriptome profiling of sterile daf-2; mes-1 double vs. mes-1 single mutants |
GSE77794 |
Uncoupling X chromosome number from sex determination separates contribution of sex and X dose to sex-biased gene expression in C. elegans |
GSE77976 |
TRX-1 Regulates SKN-1 Nuclear Localization Cell Non-Autonomously in Caenorhabditis elegans |
GSE78111 |
CELF RNA binding proteins promote axon regeneration in C. elegans and mouse through regulation of syntaxin |
GSE79375 |
dsRNAs expressed in C. elegans development |
GSE79415 |
Transcriptional profile of C. elegans fed E. coli (OP50) and B. subtilis (PY79) |
GSE79597 |
Anchoring of Heterochromatin to the Nuclear Lamina Reinforces Dosage Compensation-Mediated Gene Repression |
GSE79821 |
Localization of RNAPII and 3’ end formation factor CstF subunits on C. elegans genes and operons [ChIP-seq] |
GSE79822 |
Localization of RNAPII and 3’ end formation factor CstF subunits on C. elegans genes and operons [RNA-seq] |
GSE79823 |
Localization of RNAPII and 3 end formation factor CstF subunits on C. elegans genes and operons |
GSE80133 |
Post-transcriptional regulation by the let-7 microRNA and the TRIM-NHL protein LIN41 [Ribosome footprinting] |
GSE80157 |
Post-transcriptional regulation by the let-7 microRNA and the TRIM-NHL protein LIN41 [RNA-seq] |
GSE80159 |
Post-transcriptional regulation by the let-7 microRNA and the TRIM-NHL protein LIN41 |
GSE80169 |
Small RNA sequencing in mutant strains of C. elegans infected by the Orsay virus |
GSE81520 |
RNA-seq analysis in C. elegans larval development and heat shock |
GSE81521 |
ChIP-seq of HSF-1 and Pol II in C. elegans larval development and heat shock |
GSE81522 |
RNA-seq analysis of hsf-1 mutant in C. elegans larval development |
GSE81523 |
E2F coregulates an essential HSF developmental program that is distinct from the heat-shock response |
GSE83239 |
Expression profiles in Caenorhabditis elegans mutants lacking an intestinally expressed microRNA mir-60 that promote adaptive response against chronic oxidative stress |
GSE83330 |
ChIP-seq analysis of the C. elegans CEBP-1 protein |
GSE83528 |
Transgenerational transmission of environmental information in C. elegans |
GSE83695 |
C. elegans FBF iCLIP from spermatogenic and oogenic germlines |
GSE83887 |
Glucose or Altered Ceramide Biosynthesis Mediate Oxygen Deprivation Sensitivity Through Novel Pathways Revealed by Transcriptome Analysis in Caenorhabditis elegans |
GSE84307 |
An H4K16 histone acetyltransferase mediates decondensation of the X chromosome in C. elegans males |
GSE84581 |
Dynamic Control of X-Chromosome Conformation and Repression by a Histone H4K20 Demethylase |
GSE85441 |
Comparison of RNA Pol II localization in the genomes of sig-7 (RNAi) vs WT C. elegans early stage embryos |
GSE85442 |
Comparison of transcriptomes of sig-7 (RNAi) vs WT C. elegans early stage embryos by RNA-seq |
GSE85445 |
HTS comparison of sig-7 (RNAi) vs WT C. elegans early stage embryos |
GSE85893 |
TAIL-seq in cde-1 mutants versus WT C. elegans infected by the Orsay virus |
GSE86077 |
LIN-28 balances longevity and germline stem cell number in C. elegans through let-7/AKT/DAF-16 axis |
GSE86493 |
Vitamin D Promotes Protein Homeostasis and Longevity via the Stress Response Pathway Genes SKN-1, IRE-1, and XBP-1 |
GSE86513 |
Decoupling the downstream effects of germline nuclear RNAi reveals that transcriptional repression and heritable RNAi are independent of the H3K9me3 response in C. elegans [ChIP-seq] |
GSE86515 |
Decoupling the downstream effects of germline nuclear RNAi reveals that transcriptional repression and heritable RNAi are independent of the H3K9me3 response in C. elegans [RNA-seq] |
GSE86516 |
Decoupling the downstream effects of germline nuclear RNAi reveals that transcriptional repression and heritable RNAi are independent of the H3K9me3 response in C. elegans [pre-mRNA-seq] |
GSE86517 |
Decoupling the downstream effects of germline nuclear RNAi reveals that transcriptional repression and heritable RNAi are independent of the H3K9me3 response in C. elegans |
GSE86937 |
Impaired removal of H3K4 methylation affects cell fate determination and gene transcription |
GSE87741 |
Cooperation between a hierarchical set of recruitment sites specifically targets the C. elegans dosage compensation complex to the X chromosomes. |
GSE88834 |
H3K23me2 is a new heterochromatic mark in Caenorhabditis elegans |
GSE89608 |
Chromatin accessibility dynamics reveal novel functional enhancers in C. elegans |
GSE89887 |
morc-1 regulates transgenerational heterochromatin maintenance at nuclear RNAi targets |
GSE89890 |
Gene regulation by small RNAs and ADAR RNA editing |
GSE90099 |
H3K4me3 involvement in long-term effects of sulfomethoxazole on Caenorhabditis elegans over 11 consecutive generations and their first non-exposed progeny |
GSE90927 |
RNA-dependent RNA polymerases-synthesized antisense ribosomal siRNAs silence pre-rRNA via the nuclear RNAi pathway in C. elegans |
GSE92307 |
Nuclear RNAi Contributes to the Silencing of Off-target Genes and Repetitive Sequences in Caenorhabditis elegans |
GSE92690 |
Transcriptome profiling of P-granule-depleted or P-granule mutant gonads versus control gonads over time |
GSE92902 |
RNA-Seq analysis of dietary restriction and loss of SEK-1 in C. elegans |
GSE92954 |
The C. elegans transcriptome is regulated by environmental and developmental history |
GSE93086 |
JMJD5/PHF8 regulates H3K36me2 and it is required for late steps of homologous recombination and genome integrity |
GSE94412 |
Genome-wide expression analysis of Caenorhabditis elegans AXIN mutant |
GSE95034 |
Impaired DNA replication derepresses chromatin and generates a transgenerationally inherited epigenetic memory |
GSE95071 |
Loss of the Caenorhabditis elegans pocket protein LIN-35 reveals MuvB’s innate function as the repressor of DREAM target genes |
GSE98574 |
Network modeling reveals genetic interactions that influence C. elegans defense against infection |
GSE100482 |
Beyond the polymerase-gamma theory: Respiratory chain inhibition and production of ROS as modes of NRTI induced mitochondrial toxicity |
GSE100829 |
The C. elegans ortholog of TDP-43 regulates the chromatin localization of the heterochromatin protein 1 homolog, HPL-2 |
GSE100929 |
Global characterization of direct substrates of nonsense-mediated mRNA decay in Caenorhabditis elegans |
GSE101495 |
Histone marks in C. elegans IKB mutants |
GSE101910 |
Indole from commensal bacteria impact the aging transcriptome of C. elegans |
GSE101964 |
Adult-specific trimethylation of histone H3 lysine 4 is prone to dynamic changes with aging in C. elegans somatic cells |
GSE103432 |
GTSF-1 is required for the formation of an RNA-dependent RNA Polymerase complex in C. elegans |
GSE106374 |
An Elongin-Cullin-SOCS-box Complex Regulates Stress-induced Serotonergic Neuromodulation Stress-induced Serotonergic Neuromodulation |
GSE107523 |
Study of an allelic series using transcriptomic phenotypes |
GSE107704 |
Role of SKN-1 in dpy-7 and osmotic gene induction |
GSE108005 |
The zinc finger transcription factor PQM-1 is a mediator of transcellular chaperone signalling and novel regulator of proteostasis in C. elegans |
GSE108283 |
Hypoxia-inducible factor cell non-autonomously regulates C. elegans stress responses and behavior via a nuclear receptor |
GSE110334 |
Ribotagging on NSM neurons in C. elegans |
GSE110847 |
Sequencing of Caenorhabditis elegans at 4 different time points |
GSE110848 |
Sequencing of Caenorhabditis elegans at 4 different time points after Rotenone and DMSO treatment (small RNA) |
GSE110913 |
Transcriptome of clec-4 for the nematode Caenorhabditis elegans |
GSE110998 |
Comparison of transcriptomes of N2 and fog-2(q71) mutant Caenorhabditis elegans |
GSE111257 |
The Caenorhabditis elegans Female-Like State: Decoupling the Transcriptomic Effects of Aging and Sperm Status |
GSE111325 |
Differential expression analysis of wildtype and zip-3(gk3164) mutant with next generation sequencing |
GSE111364 |
Transcriptome of microbiome for the nematode Caenorhabditis elegans |
GSE111654 |
RNA-seq from animals treated, and non treated, with cisplatin |
GSE111797 |
Transcriptome of elt-2 for the nematode Caenorhabditis elegans |
GSE112475 |
A cytoplasmic Argonaute protein promotes the inheritance of RNAi |
GSE112708 |
ZNFX-1 Functions Within Perinuclear Nuage to Balance Epigenetic Signals |
GSE113301 |
The surveillance of pre-mRNA splicing is an early step in C. elegans RNA interference of endogenous genes. |
GSE113905 |
Erroneous ribosomal RNAs promote the generation of antisense ribosomal siRNA |
GSE114481 |
Chromatin accessibility dynamics across C. elegans development and ageing [DNase, MNase] |
GSE114494 |
Chromatin accessibility dynamics across C. elegans development and ageing |
GSE114715 |
Physical and functional interaction between the SET1/COMPASS complex component CFP-1/CXXC and a Sin3S HDAC complex |
GSE114723 |
Spatial Transcriptomics of C. elegans Males and Hermaphrodites Identifies Sex-Specific Differences in Gene Expression Patterns |
GSE114951 |
Comparison of WT to atfs-1(null) & WT to atfs-1(et18) in C. elegans by deep sequencing |
GSE115704 |
Distribution of histone modifications across the genome in C. elegans sperm vs. oocytes vs. early embryos |
GSE115705 |
Nucleosome occupancy of C. elegans wild-type (N2) early stage embryos vs. mature sperm from him-8(e1489) males |
GSE115707 |
C. elegans germlines that inherited only paternal chromosomes (non-Mendelian inheritance, 'red-head worms') and the germlines of their offspring vs. germlines that inherited both maternal and paternal chromosomes (Mendelian inheritance, HBR1280 control) |
GSE115708 |
RNA-seq transcriptome profiling of 1) C. elegans male germlines vs. oogenic germlines, and 2) male germlines, sperm, and F1 offspring germlines when offspring inherited sperm chromatin lacking H3K27me3. |
GSE115709 |
Epigenome of C. elegans sperm, oocytes, and early embryos (MNase-seq, ChIP-seq, RNA-seq) |
GSE119293 |
Binding profile of the bZIP transcription factor, ATF-7, in C. elegans on pathogenic Pseudomonas aeruginosa |
GSE119294 |
C. elegans on pathogenic Pseudomonas aeruginosa |
GSE119485 |
Polysome profiling and mRNA-seq to quantify translational gene regulation in dietary restricted C. elegans and in a long-lived daf-2:rsks-1 double mutant. |
GSE120949 |
Heat Shock in C. elegans Induces Downstream of Gene Transcription and Accumulation of Double-Stranded RNA |
GSE121091 |
Quantitative Analysis of Worms after P. aeruginosa Infection |
GSE121508 |
Comparison of Pseudomonas responsive gene expression after histone methyltransferase RNAi in C. elegans |
GSE121509 |
Comparison of R24 responsive gene expression after histone methyltransferase RNAi in C. elegans |
GSE121510 |
Comparison of heat responsive gene expression after histone methyltransferase RNAi in C. elegans |
GSE121511 |
C. elegans stress-induced gene expression in low SAM or after histone-methytransferase RNAi |
GSE121920 |
Loss of mitochondrial proline catabolism depletes FAD, impairing sperm function, and male reproductive advantage |
GSE122639 |
Binding of an X-specific condensin correlates with a reduction in active histone modifications at gene regulatory elements |
GSE123163 |
Characterization of the genes that were regulated by feeding with CBM 588 |
GSE123183 |
Bacterial diet and weak cadmium stress affect the age-specific survival rates of Caenorhabditis elegans and its resistance against severe stressors |
GSE123531 |
Transcriptional redirection of activated SKN-1/NRF2 abates the negative metabolic outcomes of a perceived pathogen infection |
GSE123921 |
Developmental arrest in response to reduced protein synthesis in C. elegans |
GSE124714 |
The mRNA decay factor CAR-1 regulates axon regeneration via mitochondrial calcium dynamics |
GSE126214 |
Steroids originating from bacterial bile acid degradation affect Caenorhabditis elegans and indicate potential risks for the fauna of manured soils |
GSE126531 |
Small RNA sequencing of C. elegans mortal germline mutants |
GSE126871 |
Repression of germline genes in C. elegans somatic tissues by H3K9 dimethylation of their promoters [ChIP-seq] |
GSE126884 |
Repression of germline genes in C. elegans somatic tissues by H3K9 dimethylation of their promoters |
GSE129642 |
RNA-seq for sf3b-1 alleles |
GSE129970 |
Effects of cadmium and integrator complex knockdown on gene expression and mRNA splicing |
GSE130039 |
Genome-wide miRNA expression analysis of Caenorhabditis elegans AXIN mutant |
GSE130371 |
Functional proteomics identified a PICS complex required for piRNA maturation and chromosome segregation |
GSE130466 |
The transcriptomic response to albendazole (ABZ), mebendazole (MBZ), thiabendazole (TBZ), oxfendazole (OxBZ) and fenbendazole (FBZ) in the C. elegans strain CB3474 ben-1(e1880)III |
GSE132640 |
SIP Identifies a Network of Dosage Compensation Condensin I Loops |
GSE132875 |
RNA Sequencing of CTRL and Heat Stressed C. elegans [miRNA-seq] |
GSE132876 |
RNA Sequencing of CTRL and Heat Stressed C. elegans |
GSE134925 |
Dietary restriction regulates microRNAs in longevity regulons |
GSE135850 |
DamID: Loss of a heterochromatin anchor rescues altered genome organization and EDMD muscle defects triggered by a laminopathy mutation |
GSE136058 |
Transcriptome of the nematode Caenorhabditis elegans infected by Bacillus thuringiensis |
GSE136462 |
C. elegans PPM-2 regulates small RNA function by stabilizing Argonaute proteins |
GSE136577 |
Loss of a heterochromatin anchor rescues altered genome organization and EDMD muscle defects triggered by a laminopathy mutation |
GSE136942 |
Natural C. elegans microbiota protects against infection via production of a cyclic lipopeptide of the viscosin group |
GSE137112 |
RNA Sequencing of C elegans control and mutant worms after 24 hour P.aeruginosa infection |
GSE137734 |
henn-1/HEN1 promotes germline immortality in Caenorhabditis elegans |
GSE141316 |
Slo2 potassium channel function depends on a SCYL1 protein |
GSE141347 |
C. elegans nuclear RNAi factor SET-32 is an H3K23 methyltransferase and deposits the transgenerational heritable modification of H3K23me3 |
GSE141668 |
Transcriptional analysis effect of excess sugar and lipid on the growth and development of Caenorhabditis elegan |
GSE142507 |
CDK1-formin signal confers microvillar effacement by an attaching and effacing (A/E) pathogen |
GSE143595 |
Caenorhabditis elegans ADAR editing and the ERI-6/7/MOV10 RNAi pathway silence endogenous viral elements and LTR retrotransposons |
GSE144292 |
Identification of EGL-43 target genes in C. elegans L3 larvae. |
GSE144607 |
Total, polysome and monosome RNAseq of Caenorhabditis elegans strains ppp-1(wrm10), ppp-1(wrm15) and wild type |
GSE144670 |
High-resolution mapping of regulatory element interactions and genome architecture using ARC-C [ARC-C] |
GSE144671 |
High-resolution mapping of regulatory element interactions and genome architecture using ARC-C [ChIP-Seq] |
GSE144672 |
High-resolution mapping of regulatory element interactions and genome architecture using ARC-C [RNA-Seq] |
GSE144673 |
High-resolution mapping of regulatory element interactions and genome architecture using ARC-C |
GSE144686 |
H3.3 nucleosome assembly mutants display a late-onset maternal effect |
GSE145456 |
RNA polymerase II CTD S2P is dispensable during embryogenesis but regulates the developmental diapause in C. elegans [ChIP-seq] |
GSE145457 |
RNA polymerase II CTD S2P is dispensable during embryogenesis but regulates the developmental diapause in C. elegans [RNA-seq] |
GSE145458 |
RNA polymerase II CTD S2P is dispensable during embryogenesis but regulates the developmental diapause in C. elegans |
GSE146256 |
Translational adaptation to heat stress is mediated by 5-methylcytosine RNA modification in Caenorhabditis elegans |
GSE146652 |
Ancestral function of Inhibitors-of-kappaB regulates Caenorhabditis elegans development (ChIP-Seq) |
GSE146654 |
Ancestral function of Inhibitors-of-kappaB regulates Caenorhabditis elegans development (RNA-Seq) |
GSE146655 |
Ancestral function of Inhibitors-of-kappaB regulates Caenorhabditis elegans development |
GSE149325 |
A ribosomal assembly stress response governed by the methionine cycle extends lifespan in C. elegans mutant with defective de novo proline biogenesis |
GSE149844 |
Global Analysis of Translational Reprogramming during Flagellar Regeneration Reveals the Role of Sphingolipid Metabolism in Ciliogenesis and Ciliopathies |
GSE151828 |
Arginine methylation promotes siRNA-binding specificity for a spermatogenesis-specific isoform of the Argonaute protein CSR-1 |
GSE154417 |
The precursor of PI(3,4,5)P3 alleviates aging by activating daf-18(Pten) and independent of daf-16 |
GSE156000 |
CDE-1 suppresses the production of risiRNA by coupling polyuridylation and degradation of rRNA |
GSE156717 |
Cell-type-specific profiling of loaded miRNAs from Caenorhabditis elegans reveals spatial and temporal flexibility in Argonaute loading [RNA-seq] |
GSE156721 |
Cell-type-specific profiling of loaded miRNAs from Caenorhabditis elegans reveals spatial and temporal flexibility in Argonaute loading |
GSE159077 |
Genome-wide expression analysis of C. elegans nematodes overexpressing the transcription factor grh-1 |
GSE162226 |
Whole genome RNA sequencing of wild type and nath-10(icb99 and icb102) alleles |
GSE165210 |
Reprogramming an endogenous small RNA pathway for multiplexed and transgenerational gene silencing in C. elegans |
GSE166549 |
Mobility of condensin DC is key to its function in repressing transcription [RNA-seq I] |
GSE166550 |
Mobility of condensin DC is key to its function in repressing transcription [RNA-seq II] |
GSE168802 |
Condensin DC spreads linearly and bidirectionally from recruitment sites to create loop-anchored TADs in C. elegans (RNA-seq) |
GSE168803 |
Condensin DC spreads linearly and bidirectionally from recruitment sites to create loop-anchored TADs in C. elegans |
GSE169458 |
Mobility of condensin DC is key to its function in repressing transcription |
GSE171836 |
Expression data from ferulic acid treated C. elegans |
GSE173580 |
RNA-seq Files : The Hypoxia Response Pathway Promotes PEP Carboxykinase And Gluconeogenesis In C. elegans |
GSE173581 |
The Hypoxia Response Pathway Promotes PEP Carboxykinase And Gluconeogenesis In C. elegans |
GSE173799 |
High throughput RNA sequencing to identify genes up regulated by the transcription factor ATF-4 |
GSE174514 |
microRNA profiling of the nematode Caenorhabditis elegans infected by Bacillus thuringiensis |
GSE176088 |
Next Generation Sequencing Facilitates Quantitative Analysis of aged (Day10) and young (L4) C. elegans Transcriptomes |
GSE178985 |
Cues from mRNA splicing prevent default Argonaute silencing in C. elegans |
GSE180506 |
Persistent DNA damage rewires lipid metabolism and promotes histone hyperacetylation via MYS-1/Tip60 |
GSE184086 |
Complete transcriptome of bir-2 knockdown C. elegans nematodes with and without exposure to pathogenic bacteria Enterococcus faecalis. |
GSE184209 |
TRL-1 undergoes phase separation to regulate the reproduction and longevity tradeoff |
GSE184491 |
Effects of cadmium and ifg-1 mutant on gene expression and mRNA splicing |
GSE189106 |
Transcriptional response to loss of rab-11.1 |
GSE189988 |
Probiotic Lacticaseibacillus rhamnosus HA-114 suppresses age-dependent neurodegeneration via mitochondrial beta-oxidation |
GSE192579 |
RNA-seq analysis of Caenorhabditis elegans Transcriptomes after fed with D-mannose |
GSE194057 |
Effects of ccf-1 RNAi on C. elegans response to cadmium and acrylamide |
GSE195536 |
A family of C. elegans VASA homologs control Argonaute pathway specificity and promote transgenerational silencing |
GSE198101 |
A family of C. elegans VASA homologs control Argonaute pathway specificity and promote transgenerational silencing [IP small-RNA seq] |
GSE199971 |
Loss of hsf-1 initiates intracellular lipid surveillance |
GSE200383 |
Neuronal HLH-30/TFEB modulates muscle mitochondrial fragmentation to improve thermoresistance in C. elegans |
GSE204953 |
Lipid droplets modulate autophagy receptor SQST-1/SQSTM1 dynamics and lifespan |
GSE218808 |
MNase-seq facilitates quantitative analysis of nucleosome positioning of wild type and mutant SWI/SNF complexes |
GSE222091 |
RNA-seq analysis of L1 arrest linc-133(aqz 3) and WT worms |
GSE222287 |
Characterization of the genes that were regulated by feeding with B. subtilis (natto) strains |
GSE222447 |
RNA-seq analysis of young adult daf-18(ok480) and control worms |
GSE223596 |
S-adenosylmethionine synthases specify distinct H3K3me3 populations and gene expression patterns during heat stress [RNA-seq: sams-4 RNAi, Heat shock] |
GSE223597 |
S-adenosylmethionine synthases specify distinct H3K3me3 populations and gene expression patterns during heat stress |
GSE228846 |
Identifying the direct targets for transcription factor HIF-1a in Caenorhabditis elegans by ChIP-seq. |
GSE230025 |
Whole animal RNA Seq of wild type and RBP/TF mutants |
GSE233533 |
Effect of mccc-1(ww4) mutation on gene expression in Caenorhabditis elegans at young adult stage fed on Comamonas aquatica DA1877 |
GSE241495 |
Effect of lactic acid bacterium 2004 on transcription profile in wildtype animals and daf-16 mutants. |
GSE243495 |
Effects of csr-1 knockdown on gene expression and mRNA splicing |
GSE254343 |
Bacterial vitamin B6 is required for post-embryonic development in C. elegans |
GSE256551 |
TF ChIP-seq from whole organism (ENCSR101QFW) |
GSE256583 |
Control ChIP-seq from whole organism (ENCSR190ONG) |
GSE256600 |
Control ChIP-seq from whole organism (ENCSR109XBO) |
GSE256687 |
TF ChIP-seq from whole organism (ENCSR013JXG) |
GSE256715 |
Control ChIP-seq from whole organism (ENCSR291MSY) |
GSE256722 |
TF ChIP-seq from whole organism (ENCSR124XUB) |
GSE256749 |
Control ChIP-seq from whole organism (ENCSR024OAH) |
GSE256750 |
Control ChIP-seq from whole organism (ENCSR200IVZ) |
GSE256792 |
TF ChIP-seq from whole organism (ENCSR204WOO) |
GSE256823 |
Control ChIP-seq from whole organism (ENCSR206FGY) |
GSE256852 |
TF ChIP-seq from whole organism (ENCSR133RTP) |
GSE256897 |
Control ChIP-seq from whole organism (ENCSR310FMI) |
GSE256959 |
Control ChIP-seq from whole organism (ENCSR222HUE) |
GSE256971 |
TF ChIP-seq from whole organism (ENCSR320EEP) |
GSE256976 |
TF ChIP-seq from whole organism (ENCSR320MVY) |
GSE256980 |
Control ChIP-seq from whole organism (ENCSR320VBK) |
GSE257017 |
TF ChIP-seq from whole organism (ENCSR154XWT) |
GSE257022 |
TF ChIP-seq from whole organism (ENCSR155UEF) |
GSE257097 |
TF ChIP-seq from whole organism (ENCSR166DXK) |
GSE257113 |
TF ChIP-seq from whole organism (ENCSR329YGE) |
GSE257141 |
TF ChIP-seq from whole organism (ENCSR050PRW) |
GSE257175 |
TF ChIP-seq from whole organism (ENCSR334YYP) |
GSE257187 |
Control ChIP-seq from whole organism (ENCSR335VJF) |
GSE257200 |
TF ChIP-seq from whole organism (ENCSR176TET) |
GSE257207 |
TF ChIP-seq from whole organism (ENCSR057TFD) |
GSE257211 |
Control ChIP-seq from whole organism (ENCSR058URE) |
GSE257243 |
Control ChIP-seq from whole organism (ENCSR183CDG) |
GSE257267 |
TF ChIP-seq from whole organism (ENCSR246TDY) |
GSE257338 |
Control ChIP-seq from whole organism (ENCSR083MKO) |
GSE257346 |
TF ChIP-seq from whole organism (ENCSR344UEX) |
GSE257385 |
Control ChIP-seq from whole organism (ENCSR095HSC) |
GSE257388 |
TF ChIP-seq from whole organism (ENCSR252OVI) |
GSE257404 |
TF ChIP-seq from whole organism (ENCSR256CRR) |
GSE257419 |
TF ChIP-seq from whole organism (ENCSR258OFT) |
GSE257421 |
Control ChIP-seq from whole organism (ENCSR356KYP) |
GSE257481 |
TF ChIP-seq from whole organism (ENCSR266SPL) |
GSE257510 |
TF ChIP-seq from whole organism (ENCSR374HBD) |
GSE257526 |
Control ChIP-seq from whole organism (ENCSR282QFI) |
GSE257569 |
TF ChIP-seq from whole organism (ENCSR536VXP) |
GSE257570 |
TF ChIP-seq from whole organism (ENCSR844VCY) |
GSE257616 |
TF ChIP-seq from whole organism (ENCSR543FLP) |
GSE257622 |
Control ChIP-seq from whole organism (ENCSR543SCG) |
GSE257644 |
Control ChIP-seq from whole organism (ENCSR852KZF) |
GSE257680 |
TF ChIP-seq from whole organism (ENCSR548OPZ) |
GSE257692 |
TF ChIP-seq from whole organism (ENCSR689UBU) |
GSE257716 |
Control ChIP-seq from whole organism (ENCSR555GJK) |
GSE257721 |
Control ChIP-seq from whole organism (ENCSR385LHQ) |
GSE257752 |
Control ChIP-seq from whole organism (ENCSR695HJO) |
GSE257755 |
TF ChIP-seq from whole organism (ENCSR695HLU) |
GSE257759 |
Control ChIP-seq from whole organism (ENCSR866XOK) |
GSE257761 |
Control ChIP-seq from whole organism (ENCSR563MPC) |
GSE257799 |
TF ChIP-seq from whole organism (ENCSR387HSD) |
GSE257836 |
Control ChIP-seq from whole organism (ENCSR577GDS) |
GSE257894 |
Control ChIP-seq from whole organism (ENCSR701DBM) |
GSE257901 |
TF ChIP-seq from whole organism (ENCSR701SBA) |
GSE257916 |
TF ChIP-seq from whole organism (ENCSR394KNZ) |
GSE257972 |
Control ChIP-seq from whole organism (ENCSR892EIQ) |
GSE257989 |
TF ChIP-seq from whole organism (ENCSR597WQR) |
GSE258004 |
TF ChIP-seq from whole organism (ENCSR710GXZ) |
GSE258053 |
TF ChIP-seq from whole organism (ENCSR714ZDK) |
GSE258057 |
TF ChIP-seq from whole organism (ENCSR408FDZ) |
GSE258067 |
Control ChIP-seq from whole organism (ENCSR411ODP) |
GSE258105 |
TF ChIP-seq from whole organism (ENCSR603SRL) |
GSE258120 |
TF ChIP-seq from whole organism (ENCSR604KUU) |
GSE258204 |
TF ChIP-seq from whole organism (ENCSR917KLO) |
GSE258213 |
Control ChIP-seq from whole organism (ENCSR918WXD) |
GSE258228 |
Control ChIP-seq from whole organism (ENCSR739RAY) |
GSE258241 |
Control ChIP-seq from whole organism (ENCSR616DAV) |
GSE258249 |
Control ChIP-seq from whole organism (ENCSR420ZTI) |
GSE258258 |
Control ChIP-seq from whole organism (ENCSR745QHO) |
GSE258261 |
TF ChIP-seq from whole organism (ENCSR620JQF) |
GSE258288 |
Control ChIP-seq from whole organism (ENCSR626CIE) |
GSE258300 |
Control ChIP-seq from whole organism (ENCSR626XZR) |
GSE258306 |
Control ChIP-seq from whole organism (ENCSR628JNH) |
GSE258317 |
Control ChIP-seq from whole organism (ENCSR748EUE) |
GSE258319 |
TF ChIP-seq from whole organism (ENCSR748QMA) |
GSE258333 |
TF ChIP-seq from whole organism (ENCSR750IEF) |
GSE258346 |
Control ChIP-seq from whole organism (ENCSR931UUY) |
GSE258351 |
Control ChIP-seq from whole organism (ENCSR754PHW) |
GSE258378 |
TF ChIP-seq from whole organism (ENCSR427JJZ) |
GSE258380 |
Control ChIP-seq from whole organism (ENCSR937YBQ) |
GSE258399 |
TF ChIP-seq from whole organism (ENCSR432MSI) |
GSE258421 |
Control ChIP-seq from whole organism (ENCSR939ISJ) |
GSE258422 |
Control ChIP-seq from whole organism (ENCSR939PJG) |
GSE258437 |
Control ChIP-seq from whole organism (ENCSR433UJZ) |
GSE258447 |
Control ChIP-seq from whole organism (ENCSR437EAS) |
GSE258489 |
Control ChIP-seq from whole organism (ENCSR942UFE) |
GSE258491 |
Control ChIP-seq from whole organism (ENCSR646YCH) |
GSE258492 |
Control ChIP-seq from whole organism (ENCSR647AIG) |
GSE258494 |
TF ChIP-seq from whole organism (ENCSR647GMY) |
GSE258516 |
TF ChIP-seq from whole organism (ENCSR442XYW) |
GSE258536 |
TF ChIP-seq from whole organism (ENCSR946AUI) |
GSE258547 |
TF ChIP-seq from whole organism (ENCSR447EUI) |
GSE258567 |
Control ChIP-seq from whole organism (ENCSR775TWW) |
GSE258590 |
TF ChIP-seq from whole organism (ENCSR778ETM) |
GSE258599 |
Control ChIP-seq from whole organism (ENCSR779STX) |
GSE258628 |
Control ChIP-seq from whole organism (ENCSR782XFF) |
GSE258645 |
TF ChIP-seq from whole organism (ENCSR957OLT) |
GSE258678 |
TF ChIP-seq from whole organism (ENCSR962KSG) |
GSE258696 |
TF ChIP-seq from whole organism (ENCSR456GSL) |
GSE258724 |
Control ChIP-seq from whole organism (ENCSR966WUX) |
GSE258765 |
Control ChIP-seq from whole organism (ENCSR471NZA) |
GSE258782 |
Control ChIP-seq from whole organism (ENCSR799DSA) |
GSE258797 |
TF ChIP-seq from whole organism (ENCSR665UXV) |
GSE258839 |
Control ChIP-seq from whole organism (ENCSR973ZVP) |
GSE258874 |
Control ChIP-seq from whole organism (ENCSR977MGF) |
GSE258915 |
Control ChIP-seq from whole organism (ENCSR481GRU) |
GSE258968 |
TF ChIP-seq from whole organism (ENCSR489SGT) |
GSE258974 |
TF ChIP-seq from whole organism (ENCSR813WNF) |
GSE258997 |
TF ChIP-seq from whole organism (ENCSR819NBT) |
GSE259096 |
TF ChIP-seq from whole organism (ENCSR507XRY) |
GSE259109 |
Control ChIP-seq from whole organism (ENCSR829OFH) |
GSE259123 |
Control ChIP-seq from whole organism (ENCSR515JDZ) |
GSE259129 |
TF ChIP-seq from whole organism (ENCSR517JNQ) |
GSE259164 |
TF ChIP-seq from whole organism (ENCSR522TSE) |
GSE259184 |
Control ChIP-seq from whole organism (ENCSR842PNM) |
GSE259199 |
Control ChIP-seq from whole organism (ENCSR530XBH) |
GSE259205 |
Control ChIP-seq from whole organism (ENCSR533CSZ) |
GSE260636 |
ATAC-seq Profiling of Mixed Stage C. elegans Neuronal Nuclei |
GSE260637 |
An activity regulated transcriptional program directly drives synaptogenesis |
GSE262600 |
RNA-seq analysis of young adult fed 5mM tryptophan and control worms |
GSE262666 |
RNA-seq analysis of the young stage ADF, middle stage ADF, and the control worms |
GSE278640 |
Bacterial purine signaling pathway modulates C. elegans development and stress tolerance via DAF-16 |
GSE280215 |
TF ChIP-seq Caenorhabditis elegans (supplemental) |
GSE280245 |
ChIP-seq Drosophila melanogaster and Caenorhabditis elegans |
GSE282640 |
Glia detect and transiently protect against dendrite substructure disruption |