GEO help: Mouse over screen elements for information.
Status
Public on Apr 09, 2011
Title
A-UMCU-M44K-1.0
Technology type
in situ oligonucleotide
Distribution
non-commercial
Organism
Mus musculus Manufacturer
Holstege Lab, UMC Utrecht, The Netherlands
Manufacture protocol
1. Slides are obtained from a commercial provider (Agilent) and reannotated using blat to obtain the latest gene annotations from ensembl.
Support
glass
Web link
http://microarrays.holstegelab.nl Contributor(s)
van Leenen D , Groot Koerkamp M , Lijnzaad P , Bakker L , Sluiters E , van Hooff S , Kemmeren P , Holstege F Submission date
Apr 08, 2011
Last update date
Apr 09, 2011
Contact name
Patrick Kemmeren
Organization name
UMC Utrecht
Department
Department of Molecular Cancer Research
Lab
Holstege Lab
Street address
Universiteitsweg 100
City
Utrecht
State/province
Utrecht
ZIP/Postal code
3584 CG
Country
Netherlands
Samples (210)
GSM707648 , GSM707649 , GSM707650 , GSM707651 , GSM707652 , GSM707653
GSM707654 ,
GSM707655 ,
GSM707656 ,
GSM707657 ,
GSM707658 ,
GSM707659 ,
GSM832087 ,
GSM832088 ,
GSM832089 ,
GSM832090 ,
GSM832091 ,
GSM832092 ,
GSM832093 ,
GSM832094 ,
GSM832095 ,
GSM832096 ,
GSM832097 ,
GSM832098 ,
GSM832099 ,
GSM832100 ,
GSM865986 ,
GSM865987 ,
GSM865988 ,
GSM865989 ,
GSM865990 ,
GSM865991 ,
GSM865992 ,
GSM865993 ,
GSM865994 ,
GSM865995 ,
GSM865996 ,
GSM865997 ,
GSM865998 ,
GSM865999 ,
GSM866000 ,
GSM866001 ,
GSM866002 ,
GSM866003 ,
GSM866004 ,
GSM866005 ,
GSM866006 ,
GSM866007 ,
GSM866008 ,
GSM866009 ,
GSM950853 ,
GSM950854 ,
GSM950855 ,
GSM950856 ,
GSM950857 ,
GSM950858 ,
GSM950859 ,
GSM950860 ,
GSM950861 ,
GSM950862 ,
GSM950863 ,
GSM950864 ,
GSM1018965 ,
GSM1018966 ,
GSM1018967 ,
GSM1018968 ,
GSM1018969 ,
GSM1018970 ,
GSM1018971 ,
GSM1018972 ,
GSM1018973 ,
GSM1018974 ,
GSM1018975 ,
GSM1018976 ,
GSM1018977 ,
GSM1018978 ,
GSM1018979 ,
GSM1018980 ,
GSM1018981 ,
GSM1018982 ,
GSM1018983 ,
GSM1018984 ,
GSM1018985 ,
GSM1018986 ,
GSM1018987 ,
GSM1018988 ,
GSM1018989 ,
GSM1018990 ,
GSM1018991 ,
GSM1018992 ,
GSM1018993 ,
GSM1018994 ,
GSM1018995 ,
GSM1018996 ,
GSM1018997 ,
GSM1018998 ,
GSM1018999 ,
GSM1019000 ,
GSM1019001 ,
GSM1019002 ,
GSM1019003 ,
GSM1019004 ,
GSM1019005 ,
GSM1019006 ,
GSM1019007 ,
GSM1019008 ,
GSM1019009 ,
GSM1019010 ,
GSM1019011 ,
GSM1019012 ,
GSM1019013 ,
GSM1019014 ,
GSM1019015 ,
GSM1019016 ,
GSM1019017 ,
GSM1019018 ,
GSM1019019 ,
GSM1019020 ,
GSM1019021 ,
GSM1019022 ,
GSM1019023 ,
GSM1019024 ,
GSM1019025 ,
GSM1019026 ,
GSM1019027 ,
GSM1019028 ,
GSM1116256 ,
GSM1116257 ,
GSM1116258 ,
GSM1116259 ,
GSM1146124 ,
GSM1146125 ,
GSM1146126 ,
GSM1146127 ,
GSM1146128 ,
GSM1146129 ,
GSM1146130 ,
GSM1146131 ,
GSM1146132 ,
GSM1146133 ,
GSM1146134 ,
GSM1146135 ,
GSM1146136 ,
GSM1146137 ,
GSM1146138 ,
GSM1146139 ,
GSM1146140 ,
GSM1146141 ,
GSM1146142 ,
GSM1146143 ,
GSM1146144 ,
GSM1146145 ,
GSM1146146 ,
GSM1146147 ,
GSM1146148 ,
GSM1146149 ,
GSM1146150 ,
GSM1146151 ,
GSM1146152 ,
GSM1146153 ,
GSM1146154 ,
GSM1146155 ,
GSM1146156 ,
GSM1146157 ,
GSM1377683 ,
GSM1377684 ,
GSM1377685 ,
GSM1377686 ,
GSM1377687 ,
GSM1377688 ,
GSM1848058 ,
GSM1848059 ,
GSM1848061 ,
GSM1848062 ,
GSM1848064 ,
GSM1848066 ,
GSM1848067 ,
GSM1848069 ,
GSM2914263 ,
GSM2914264 ,
GSM2914265 ,
GSM2914266 ,
GSM2914267 ,
GSM2914268 ,
GSM2914269 ,
GSM2914270 ,
GSM2914271 ,
GSM2914272 ,
GSM2914273 ,
GSM2914274 ,
GSM2914275 ,
GSM2914276 ,
GSM2914277 ,
GSM2914278 ,
GSM2914279 ,
GSM2914280 ,
GSM2914281 ,
GSM2914282 ,
GSM2914283 ,
GSM2914284 ,
GSM2914285 ,
GSM2914286 ,
GSM2914287 ,
GSM2914288 ,
GSM2914289 ,
GSM2914290 ,
GSM2914291 ,
GSM2914292 ,
GSM2914293 ,
GSM2914294 Series (14)
GSE28587 YG001: A Usp7-Tip60 pathway regulates early adipogenesis
GSE33644 A central role for TFIID in the pluripotent transcription circuitry [PP002]
GSE33645 A central role for TFIID in the pluripotent transcription circuitry [PP003]
GSE33646 A central role for TFIID in the pluripotent transcription circuitry
GSE35326 KC001: Genome wide expression profiling of the mesodiencephalic region led to the identification of novel factors involved in early and late dopaminergic development.
GSE38862 NO001: Kdm5c controls promoter and enhancer activities
GSE41554 MH003A:FOXO3 in control of circadian rhythms via direct regulation of Clock. Part 1: overexpression of FoxO6
GSE41555 MH003B:FOXO3 in control of circadian rhythms via direct regulation of Clock. Part 2: knockdown of FoxO3.
GSE41566 FOXO3 in control of circadian rhythms via direct regulation of Clock
GSE45831 EH004: Lmx1a encodes a rostral set of mesodiencephalic dopaminergic neurons marked by the Wnt/b-catenin signaling activator Rspo2
GSE47178 KC002-EH005: Genetic and epigenetic features of induced pluripotent stem cell-derived dopaminergic neurons
GSE57234 FJ004: Dopaminergic subset specification as a model for molecular mechanisms of neuronal vulnerability in Parkinson's Disease
GSE71954 MH002: FoxO6 is required for Plxna4-mediated neuronal migration during cortical development
GSE108842 MHOR002 expression: Forkhead box O transcription factors both suppress and support breast cancer progression.
Data table header descriptions ID primary identifier
METACOLUMN metagrid column position
METAROW metagrid row position
COLUMN grid column position
ROW grid row position
PROBE_ID alternative spot identifier
SUPPLIER_ID original supplier id, e.g. from agilent or operon
REPORTER_GROUP class the reporter belongs to, e.g. controls or genes
SEQUENCE nucleotide sequence
SYSTEMATIC_NAME systematic name of the gene
GENE_SYMBOL Gene symbol for the gene
ORF Gene symbol
ORGANISM organism
PRIMARY_DB primay external database identifier, format is <extdb>:<identifier>
SPOT_ID alternative spot identifier
Data table ID METACOLUMN METAROW COLUMN ROW PROBE_ID SUPPLIER_ID REPORTER_GROUP SEQUENCE SYSTEMATIC_NAME GENE_SYMBOL ORF ORGANISM PRIMARY_DB SPOT_ID 1
1
1
1
1
QCAA003595
GE_BrightCorner
qc_control
CONTROL
2
1
1
2
1
QCAA003595
GE_BrightCorner
qc_control
CONTROL
3
1
1
3
1
QCAA000454
DarkCorner
qc_control
CONTROL
4
1
1
4
1
QCAA000454
DarkCorner
qc_control
CONTROL
5
1
1
5
1
QCAA000454
DarkCorner
qc_control
CONTROL
6
1
1
6
1
QCAA000454
DarkCorner
qc_control
CONTROL
7
1
1
7
1
QCAA000454
DarkCorner
qc_control
CONTROL
8
1
1
8
1
QCAA000454
DarkCorner
qc_control
CONTROL
9
1
1
9
1
QCAA000454
DarkCorner
qc_control
CONTROL
10
1
1
10
1
QCAA000454
DarkCorner
qc_control
CONTROL
11
1
1
11
1
QCAA000454
DarkCorner
qc_control
CONTROL
12
1
1
12
1
QCAA000454
DarkCorner
qc_control
CONTROL
13
1
1
13
1
QCAA000454
DarkCorner
qc_control
CONTROL
14
1
1
14
1
QCAA000454
DarkCorner
qc_control
CONTROL
15
1
1
15
1
QCAA000454
DarkCorner
qc_control
CONTROL
16
1
1
16
1
QCAA000454
DarkCorner
qc_control
CONTROL
17
1
1
17
1
QCAA000454
DarkCorner
qc_control
CONTROL
18
1
1
18
1
QCAA000454
DarkCorner
qc_control
CONTROL
19
1
1
19
1
QCAA000454
DarkCorner
qc_control
CONTROL
20
1
1
20
1
MMAB001967
A_51_P143341
gene
CTCAGAAGACCAACAAAGAGCTCACTTCTCTGTGAGCGAGACAAATTAGCACCTCAAGTT
ENSMUSG00000028621
Cyb5rl
Cyb5rl Mus musculus
ensembl:ENSMUSG00000028621
45220 7605 Kbytes .Supplementary data files not provided
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